SLASH (System for Large-scale Automatic Segmentation utilizing High-performance computing techniques)

Subtract the Myelin layer from the All Membrane CDeep3M prediction

Archive data and store metadata. Also generate the microscopy ID

Cascaded Hierarchical Model Automatic Segmentation Algorithm in Python

Cascaded Hierarchical Model Automatic Segmentation Algorithm

Contains scripts to assist with the segmentation of EM data

Geometry analysis tools for segmented EM data

This repository contains all CIL public annotation metadata in the JSON format.

MRC File Workflow validates a MRC file

CHM Image dataset Workflow

Generates tiled images from Single Slice CHM image dataset workflow output