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  • Fudan University
  • Jiangwan Campus, Fudan University,2005 Songhu Road, Yangpu District, Shanghai, China
  • 12:39 (UTC +08:00)

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sluminositys/README.md

Sluminosity — Genomics, AI, and agentic research systems

RepositoriesStarsProfile views

Genomics × AI · Agentic systems · Research engineering

About

Working at the intersection of population genomics and artificial intelligence, I develop computational methods to uncover signals of human evolutionary history—and agentic systems that make complex bioinformatics research scalable, rigorous, and reproducible.

Featured systems

🧬 ArchaicSeeker 3

Mamba-based detection of Neanderthal and Denisovan introgression segments in modern human genomes, designed for large-scale multi-GPU analysis.

Population GenomicsMambaPyTorch

🕸️ LATTICE

A layered, tool-augmented agent system that turns bioinformatics requests into verifiable, executable, auditable, and evolving workflows.

AgentsKnowledge GraphsBioinformatics

✨ Atria

A desktop-first HTML artifact workspace for collecting, annotating, organizing, and reusing AI-generated coding and research outputs—with MCP-native agent access.

TauriReactTypeScriptMCP

Tech stack

Technology stack grouped into research and AI, products and agents, and data and infrastructure

Live telemetry

Live GitHub research telemetry

Contribution activity animation

Curious about genomes. Building tools that help researchers move from ideas to evidence.

Pinned Loading

  1. ArchaicSeeker3.0ArchaicSeeker3.0Public

    Forked from Shuhua-Group/ArchaicSeeker3.0

    A Mamba-Based Algorithm for Archaic Introgression Detection

    Python

  2. AtriaAtriaPublic

    TypeScript

  3. render-markdown-reading-viewrender-markdown-reading-viewPublic

    A deterministic Agent Skill for presenting immutable Markdown as a polished, self-contained HTML reading view.

    Python 2

  4. BakumoBakumoPublic

    Python

  5. dsh-nested-followupsdsh-nested-followupsPublic

    Ask a follow-up on any past answer in an isolated branch, keeping your main conversation clean. 针对任意历史回答发起追问，新问题在独立分支中展开，主对话保持干净。A conversation-tree plugin for DeepSeek Harness / DeepSeek Harness 会…

    TypeScript 13 1