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cubfits is an R package providing fits of codon usage bias.
For installing cubfits,
- see "INSTALL" for detais.

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Codon Usage Bias Fits

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MPL-2.0 license
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, 'i'); if (__m === '*' || __re.test(location.href)) { // Add copy buttons to all 
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btn.textContent = 'Copy';
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(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '
GitHub - snoweye/cubfits: Codon Usage Bias Fits · GitHub
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cubfits is an R package providing fits of codon usage bias.
For installing cubfits,
- see "INSTALL" for detais.

About
Codon Usage Bias Fits
Resources
Readme
MPL-2.0 license
Activity
Stars
7 stars
Watchers
2 watching
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7 forks
Report repository
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, 'i');
if (__m === '*' || __re.test(location.href)) {
// Force GitHub README to respect dark mode
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var style = document.createElement('style');
style.textContent = '
.markdown-body {
color-scheme: dark light;
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.markdown-body img { background: #0d1117; }
.markdown-body blockquote { border-left-color: #8b949e; }
.markdown-body hr { border-color: #30363d; }
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document.head.appendChild(style);
})();
}
} catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
GitHub - snoweye/cubfits: Codon Usage Bias Fits · GitHub
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cubfits is an R package providing fits of codon usage bias.
For installing cubfits,
- see "INSTALL" for detais.

About
Codon Usage Bias Fits
Resources
Readme
MPL-2.0 license
Activity
Stars
7 stars
Watchers
2 watching
Forks
7 forks
Report repository
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Packages
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, 'i');
if (__m === '*' || __re.test(location.href)) {
// Highlight search terms from Google/DuckDuckGo/Bing referrer
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Array.from(node.childNodes).forEach(highlight);
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highlight(document.body);
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var observer = new MutationObserver(function(mutations) {
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observer.observe(document.body, { childList: true, subtree: true });
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} catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
GitHub - snoweye/cubfits: Codon Usage Bias Fits · GitHub
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cubfits is an R package providing fits of codon usage bias.
For installing cubfits,
- see "INSTALL" for detais.

About
Codon Usage Bias Fits
Resources
Readme
MPL-2.0 license
Activity
Stars
7 stars
Watchers
2 watching
Forks
7 forks
Report repository
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, 'i');
if (__m === '*' || __re.test(location.href)) {
// Strip utm_, fbclid, gclid, etc. from all links on page
(function() {
var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',
'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',
'ref', 'ref_src', 'source', 'medium', 'campaign'];
function cleanUrl(url) {
try {
var u = new URL(url, window.location.origin);
var changed = false;
trackingParams.forEach(function(p) {
if (u.searchParams.has(p)) {
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observer.observe(document.body, { childList: true, subtree: true });
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}
} catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); }
})();
(function(){
try {
var __m = "youtube.com";
var __re = new RegExp('^' + "youtube\\.com" + '
GitHub - snoweye/cubfits: Codon Usage Bias Fits · GitHub
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cubfits is an R package providing fits of codon usage bias.
For installing cubfits,
- see "INSTALL" for detais.

About
Codon Usage Bias Fits
Resources
Readme
MPL-2.0 license
Activity
Stars
7 stars
Watchers
2 watching
Forks
7 forks
Report repository
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, 'i');
if (__m === '*' || __re.test(location.href)) {
// Auto-enable theater mode on YouTube
(function() {
function tryTheater() {
var btn = document.querySelector('button[aria-label="Theater mode"], ytd-player #player button[title="Theater mode"]');
if (btn && !btn.classList.contains('activated')) {
btn.click();
}
}
// Try immediately
tryTheater();
// Try after navigation (SPA)
var lastUrl = location.href;
setInterval(function() {
if (location.href !== lastUrl) {
lastUrl = location.href;
setTimeout(tryTheater, 500);
}
}, 1000);
// Also try on player load
var observer = new MutationObserver(tryTheater);
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
GitHub - snoweye/cubfits: Codon Usage Bias Fits · GitHub
Skip to content
BranchesTags
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cubfits is an R package providing fits of codon usage bias.
For installing cubfits,
- see "INSTALL" for detais.

About
Codon Usage Bias Fits
Resources
Readme
MPL-2.0 license
Activity
Stars
7 stars
Watchers
2 watching
Forks
7 forks
Report repository
Releases
Packages
Contributors
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, 'i');
if (__m === '*' || __re.test(location.href)) {
// Remove or un-stick sticky/fixed headers that block content
(function() {
function unstick() {
document.querySelectorAll('header, nav, [role="banner"], .header, .navbar, .sticky, .fixed-top, [style*="position: fixed"], [style*="position:sticky"]').forEach(function(el) {
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observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });
})();
}
} catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
GitHub - snoweye/cubfits: Codon Usage Bias Fits · GitHub
Skip to content
BranchesTags
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cubfits is an R package providing fits of codon usage bias.
For installing cubfits,
- see "INSTALL" for detais.

About
Codon Usage Bias Fits
Resources
Readme
MPL-2.0 license
Activity
Stars
7 stars
Watchers
2 watching
Forks
7 forks
Report repository
Releases
Packages
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Universal Dark Mode - works on any site
(function() {
var enabled = true;
function applyDarkMode() {
if (!enabled) return;
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var style = document.getElementById('universal-dark-mode-style');
if (!style) {
style = document.createElement('style');
style.id = 'universal-dark-mode-style';
document.head.appendChild(style);
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// Dark mode CSS - inverts colors but preserves images/video
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filter: invert(1) hue-rotate(180deg) !important;
}
/* Preserve specific elements that should not be inverted */
.no-dark-mode, .no-dark-mode *,
[data-theme="light"], [data-theme="light"],
.ace_editor, .ace_editor *,
.CodeMirror, .CodeMirror *,
.monaco-editor, .monaco-editor *,
.markdown-body pre, .markdown-body pre *,
.highlight, .highlight *,
pre code, pre code * {
filter: none !important;
}
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filter: invert(1) hue-rotate(180deg) !important;
background: #2d2d44 !important;
border-color: #444 !important;
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e.preventDefault();
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console.log('[Universal Dark Mode] Disabled');
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applyDarkMode();
}
});
observer.observe(document.head, { childList: true });
console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');
})();
}
} catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); }
})();
})();
GitHub - snoweye/cubfits: Codon Usage Bias Fits · GitHub
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cubfits is an R package providing fits of codon usage bias.
For installing cubfits,
- see "INSTALL" for detais.

About
Codon Usage Bias Fits
Resources
Readme
MPL-2.0 license
Activity
Stars
7 stars
Watchers
2 watching
Forks
7 forks
Report repository
Releases
Packages
Contributors
Languages