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[6.x] Remove deprecations - #11612
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{{ relate }}tag left over from v2.SyncsOriginalStatetrait in favour ofHasDirtyState. Deprecated in [4.x] AddisDirty/isClean#5502.Site::setConfig()method in favour ofSite::setSites()/Site::setSiteValue(). Deprecated in [5.x] Move sites out of config #9632.CollectionRepository, as they've been moved to theEntryRepository. Deprecated in [5.x] Move updating from collection repo to entry repo #10383.NavItem::active()as its no longer used to determine the active state of nav items. Deprecated in [4.x] Fix CP nav item active status regressions #8880.