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report for covid19 data

Status: Open.

#38In stevekm/reportIT;

· gadepallivs opened on Dec 6, 2022

Samples with no variants not appearing in final report

bug

Status: Open.

#37In stevekm/reportIT;

· stevekm opened on Mar 13, 2018

Need to download other files from server

enhancement

Status: Open.

#36In stevekm/reportIT;

· stevekm opened on Jun 26, 2017

Change overview report sample table caption

enhancement

Status: Open.

#35In stevekm/reportIT;

· stevekm opened on May 12, 2017

Overview report variant table and IGV snapshots are not in sync

bug

enhancement

Status: Open.

#33In stevekm/reportIT;

· stevekm opened on Apr 10, 2017

bin setup script does not unzip IGV correctly

bug

Status: Open.

#30In stevekm/reportIT;

· stevekm opened on Mar 20, 2017

some variants are getting left out of IGV snapshots

bug

Status: Open.

#28In stevekm/reportIT;

· stevekm opened on Feb 24, 2017

Save stdout and stderr logs from active session script usage

enhancement

Status: Open.

#23In stevekm/reportIT;

· stevekm opened on Feb 15, 2017

sometimes the IGV reporting script gets hung up

bug

Status: Open.

#22In stevekm/reportIT;

· stevekm opened on Feb 15, 2017

paired log dir creation causes recursive symlinks

bug

Status: Open.

#21In stevekm/reportIT;

· stevekm opened on Feb 15, 2017

Need stdout logging for interactive scripts

enhancement

Status: Open.

#19In stevekm/reportIT;

· stevekm opened on Jan 14, 2017

Need to integrate tumor & tissue type

enhancement

Status: Open.

#9In stevekm/reportIT;

· stevekm opened on Dec 17, 2016