angsd

Here are 2 public repositories matching this topic...

zjnolen / PopGLen

Bioinformatics pipeline to process whole genome resequencing data and perform genotype likelihood based population genomic analyses using ANGSD and related softwares. Flexible to datasets that combine high/low coverage and historical/fresh samples.

bioinformatics snakemake bioinformatics-pipeline population-genomics whole-genome-sequencing genotype-likelihoods angsd museomics

Updated Aug 18, 2026
Python

henriquevf / popgen-scripts

Star

Standalone, documented population-genomics modules for non-model/wildlife genomics: heterozygosity, coverage QC, SNP density, gene-set enrichment.

bioinformatics population-genomics heterozygosity angsd conservation-genomics snp-density

Updated Jul 19, 2026
Python

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