Pangenome-Analysis.py is written for extraction of core, accessory and unique genomes (Gene families and proteins) along with filtration of single copy orthologues, creation of binary and count matrices as well as removal of duplicates.
bioinformaticsannotationclusteringbiologygene-familiesbioinformatics-analysisproteome-clusteringdownstream-analysisorthomclpangenomesingletonsplasmodiumduplicates-removalgene-familybinary-matrixaccessory-genescoregenomepangenome-inferencepangenome-pipelinecount-matrix
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Updated
Feb 21, 2022 - Python