cooler

A cool place to store your Hi-C

Workshop on measuring, analyzing, and visualizing the 3D genome with Hi-C data.

Lightweight converter between hic and cool contact matrices.

An easy-to-use Hi-C data processing software supporting distributed computation.

Docker for 4DN Hi-C processing pipeline

A Python implementation for BH-FDR and HiCCUPS

A Library to Explore Chromatin Interaction Patterns for Topologically Associating Domains

Blazing fast toolkit to work with .hic and .cool files

Plug-in for CoolerControl that extends the LCD functionality with additional features

Elevate your cooler with modern and reactive themes.

A toolkit for analyzing architectural stripes

Python bindings for hictk: read and write .cool and .hic files directly from Python

Linux solution to control fans on MSI laptops.

Thermoelectric module temperature stabilizer. HARDWARE part.

R bindings for hictk: read .cool and .hic files directly from R

HiChIP-seq analysis from paired-end reads: contact matrices, peak-anchored loop calling, loop QC, differential loops, visualization, and graph export for downstream analysis.

💻 HavocLab— a fast, minimal, and modern showcase of everything I build. A live lab where projects, prototypes, and experiments ship in real time.

FIREcaller: Python library for detecting Frequently Interacting REgions (FIREs) from Hi-C data

This is an official framework application template for Coole. - 这是一个官方提供的 Coole 框架应用模板。

STM32 Nucleo F446RE PID temperature controller with Python GUI