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fastp

Here are 3 public repositories matching this topic...

OpenOmics / weave

An awesome BCL demultiplexing and FastQ quality-control pipeline

kaiju bcl2fastq fastp krona kraken2 bclconvert fastq-quality-control contamination-screening disambiguate-genomes

Updated Apr 22, 2025
Python

muhammetozcelik / genomqc-rnaseq-qc

Reproducible quality control and preprocessing for paired-end RNA-seq FASTQ files

bioinformatics quality-control reproducible-research rnaseq multiqc fastq fastqc fastp

Updated Jul 25, 2026
Python

pommevilla / snakemake-genome-assembly-practice

bioinformatics snakemake genome-assembly fastp unicycler bbduk checkm2

Updated Nov 27, 2023
Python

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