nih

Weakly Supervised Learning for Findings Detection in Medical Images

Slicer extensions index

Brain extraction in presence of abnormalities, using single and multiple MRI modalities

Lung Extraction from Chest X-ray for Efficient Computing

Age-Related Macular Degeneration (AMD) Research using AREDS dataset provided by National Institute of Health (NIH).

🧠 | Multimodal Integration of Oncology Data System

This repository shares the preprocessing scripts for Deep Learning we use at the Molecular Imaging Branch at the NIH

Expression-oriented language with Python backend

"NIHDataFetcher" is a GitHub repository with scripts for accessing and fetching data from various NIH databases like GEO and PubMed. It provides code examples to retrieve GEO datasets, search PubMed, and load ClinVar data. Ideal for researchers and data scientists working with biomedical information.

Collect NIH NCBI SRA metadata of several GEO studies in one search

Simple docker builder

Скрипт для управления docker-контейнерами.

Catches common errors in NIH grant budget spreadsheets — salary cap, module counts, MTDC base — entirely offline. No upload, no account, no network call.

Three MCP servers for federal patent and grant research (USPTO + multi-source NSF/NIH/DOE + SBIR). Built for the Aerographix landscape passes.

Automated Python tool for tracking NIH publication compliance by querying PubMed, PMC, NIHMS, and iCite, with REDCap integration.

Framework and results for CRISPR perturbation prediction benchmarks, extending the Nature Methods setting with LSFT, LOGO, and single-cell transfer analysis.