Skip to content
#

palaeogenomics

Star

Here are 4 public repositories matching this topic...

Language: All
Filter by language
All 4 CSS 1 HTML 1 Python 1 Shell 1

tjmurchie / PalaeoKin

Star 0

PalaeoKin is a lightweight ancient-DNA pipeline for estimating pairwise relatedness from mapped BAMs at low/uneven coverage. It wraps ANGSD + NgsRelate (KING-robust kinship, R0/R1) and samtools, producing a clear summary plus PDF/SVG QC plots, with optional downsampling and allele-balance/mixture diagnostics.

python bash bioinformatics bam population-genetics kinship relatedness ancient-dna angsd low-coverage palaeogenomics hakai-institute archaeogenomics ngsrelate
  • Updated Jun 11, 2026
  • Shell

Add this topic to your repo

To associate your repository with the palaeogenomics topic, visit your repo's landing page and select "manage topics."

Learn more