protien

Evolutionary Algorithm with Diffusion Models for Protein Design

This tool is designed to extract protein sequence patterns using the ScanProsite tool from ExPASy and save the results in a CSV file. The tool reads a FASTA file, extracts protein sequences, scans for Prosite signatures, and retrieves the corresponding consensus patterns from the Prosite database.

AutoFuz is a webscraping tool to automate the retrieval of liquid-liquid phase separation. For more info, please visit the Official FuzDrop Website.

Research-oriented bioinformatics toolkit for protein sequence analysis using Python.

Deep learning framework for protein secondary structure and contact map prediction using CNN, BiLSTM, and Transformer architectures with ESM-2 embeddings.

This project applies AI-based de novo protein design to generate synthetic proteins for precise cancer detection. Following the HER2–Herceptin targeting concept, it integrates ML, AlphaFold prediction, and sequence tuning to design high-affinity cancer-binding proteins.

ProteinFlex is a comprehensive platform for protein structure analysis and drug discovery, leveraging advanced AI and machine learning techniques. The platform combines state-of-the-art protein structure prediction with interactive visualization and sophisticated drug discovery tools.