Teichlab / thymus_spatial_atlas Star 12 Code Issues Pull requests general repo that holds all analysis and figures for the thymus spatial atlas by Yayon, Kedlian, Boehme, Radtke and many more!genomicshumanimmunologysingle-cellthymusbioinformatics-toolspatial-transcriptomicscommon-coordinate-framwork Updated Nov 20, 2024Jupyter Notebook
shiqijialab / insm1thymus Star 0 Code Issues Pull requests Data analysis codeimmunologybioinformatics-scriptsthymus Updated Sep 20, 2023Jupyter Notebook
Eomesodermin / Thymic_NK_development Star 0 Code Issues Pull requests Thymic NK-cell development — single-cell mtDNA clonal lineage tracing (mgatk/ReDeeM), clone inference and HPC pipelinespythonrsingle-cellthymusmtdnascataclineage-tracingclonal-analysisnk-cells Updated Jul 13, 2026HTML
thymusforge / wells-2020-mtec-hormone-reanalysis Star 0 Code Issues Pull requests Reanalysis of Wells et al. 2020 mTEC scRNA-seq data focusing on hormone receptor signaling.single-cell-rna-seqthymusmtechormone-signaling Updated Jun 20, 2026R
crhisto / thymus_NPM-ALK_notebook Star 0 Code Issues Pull requests R Notebook with scripts for running the deconvolution of thymus bulk data identifying T-cell proportionsdeconvolutionsingle-cell-rna-seqnon-negative-matrix-factorizationthymusbulk-rna-seq Updated Dec 12, 2020HTML