#

toil

Here are 7 public repositories matching this topic...

ropensci / UCSCXenaTools

📦 An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.org/web/packages/UCSCXenaTools/

downloader bioinformatics r tcga api-client ucsc treehouse icgc ccle toil ucsc-xena

Updated May 5, 2026
R

deoops-net / dotam

toil for developers

golang workflow sre automa toil pipline

Updated Dec 5, 2025
Go

CNRGH / WMS-benchmark

Workflow management system benchmark

snakemake nextflow wdl pegasus cwl workflow-management-system cromwell toil cwltoil

Updated Jun 3, 2020
Shell

stevekm / toil-elk

Template for running Toil on LSF HPC with ELK stack logging

elasticsearch logstash hpc filebeat lsf cwl elk-stack cwl-workflow toil

Updated Oct 15, 2021
Makefile

papaemmelab / toil_example

🤖 A Toil example pipeline created with cookiecutter-toil.

pipelines travis-badge codecov-badge toil pypi-badge

Updated Sep 8, 2021
Python

mwiens91 / hello-world-workflow

A tiny test CWL workflow to help develop new features for Toil

test example cwl toil

Updated Jul 15, 2018
Common Workflow Language

fabiocicerchia / toil-audit

Analyses CI/CD run history and quantifies the cost of manual pipeline toil

metrics ci-cd sre developer-experience toil

Updated Sep 7, 2026
Python

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