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transmart

Here are 11 public repositories matching this topic...

thehyve / transmart-api-client-py

🐍 Python client for tranSMART Glowing Bear

python data-science rest-api transmart

Updated Feb 20, 2023
Python

thehyve / tmtk

tranSMART Arborist ETL toolkit

jupyter-notebook transmart data-modeling data-curation

Updated Jul 31, 2020
Python

thehyve / python_csr2transmart

Scripts for converting CSR data to TranSMART

transmart transmart-copy

Updated Feb 19, 2023
Python

thehyve / python_transmart_loader

TranSMART loader library for Python

python transmart transmart-copy

Updated Sep 1, 2022
Python

thehyve / python_claml2transmart

ClaML ontology to TranSMART loader

transmart claml transmart-copy

Updated Nov 6, 2019
Python

thehyve / transmart-hyper-dicer

Export a subset of data from a TranSMART instance based on a query, and upload them to a different (empty) TranSMART instance using transmart-copy. Short for TranSMART hypercube dicer.

transmart cutting-edge

Updated May 22, 2023
Python

thehyve / pmc-conversion

Data extraction, transformation and loading pipeline for the Princess Maxima Center

cbioportal luigi transmart

Updated Nov 1, 2023
Python

JannikNickel / MTT

ETL process for transforming the MIMIC-III dataset into the required format for tranSMART-batch by using high dimensional data types to store time series data.

transmart mimic-iii

Updated Nov 7, 2020
Python

thehyve / python_fhir2transmart

FHIR to TranSMART loader

fhir transmart transmart-copy

Updated Nov 6, 2019
Python

thehyve / python_ontology2transmart

Example ontology to TranSMART loader

transmart transmart-copy

Updated Nov 6, 2019
Python

thehyve / transmart-packer

data jobs for transmart

export transmart

Updated Jul 13, 2022
Python

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