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The repository contains the demo code for the Zeiss Hackathon 2017 and was completed in collaboration with Utkarsh Agrawal, Pranav Aggarwal, Pranav Kedia and Rachit Jain
A specialized batch-processing pipeline for Zeiss CZI files. Optimized for ApoTome & Brain sections. Fixes hyperstack dimensions, recovers LUTs, and removes shading via rolling-ball pre-processing.