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tuur/README.md

Hi 👋

I use github to share code (and in some cases data) from published research papers. If you run into issues or have questions regarding the code or data (or papers in general) feel free to send an email!

Cheers, Tuur

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  1. AbsClinTimelinesTASLAbsClinTimelinesTASLPublic

    << Code, data, annotation tool plus guidelines >> Towards Extracting Absolute Event Timelines From English Clinical Reports (TASL, 2020).

    HTML 2

  2. SynonymsFromWordEmbeddingsSynonymsFromWordEmbeddingsPublic

    <<System output: English and German synonyms>> A Minimally Supervised Approach for Synonym Extraction with Word Embeddings (PBML, 2016)

  3. SPTempRelsSPTempRelsPublic

    <<Code>> Structured Learning for Temporal Relation Extraction from Clinical Records (EACL, 2017).

    Python 5 1

  4. collinearitycollinearityPublic

    Code for our methodological article on the performance of binary prediction models in high-correlation low-dimensional settings.

    Python 3 1

  5. sdoh_n2c2track2_ucsf_umcusdoh_n2c2track2_ucsf_umcuPublic

    Code and data annotations for the N2C2 SDOH challenge and follow up article in the Journal of Clinical Epidemiology about downstream impact of NLP in association study results.

    Python 3 2

  6. code-status-annotations-mimiccode-status-annotations-mimicPublic

    Code status annotations for 1174 MIMIC-III discharge summaries

    3 1