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Python for Process Engineering Schema (PyPES)

Build StatusDocumentationCode CoverageZenodo DOI

A class hierarchy designed to represent configurations of process engineering systems, such as wastewater treatment or desalination plants.

Full documentation available at https://we3lab.github.io/pype-schema/.

Useful Commands

  1. pip install -e .
This will install your package in editable mode.
  1. pytest pype_schema/tests --cov=pype_schema --cov-report=html
Produces an HTML test coverage report for the entire project which can be found at htmlcov/index.html.
  1. docs/make html
This will generate an HTML version of the documentation which can be found at _build/html/index.html.
  1. flake8 pype_schema --count --verbose --show-source --statistics
This will lint the code and share all the style errors it finds.
  1. black pype_schema
This will reformat the code according to strict style guidelines.

Legal Documents

This work is supported by the National Alliance for Water Innovation (NAWI), funded by the U.S. Department of Energy, Energy Efficiency and Renewable Energy Office, Advanced Manufacturing Office under Funding Opportunity Announcement DE-FOA-0001905. The views expressed herein do not necessarily represent the views of the U.S. Department of Energy or the United States Government.

This work is also supported by the Center for Integrated Facility Engineering at Stanford University as a a part of CIFE Seed Proposal 2023-02 Formal proofs of safe operating limits at wastewater resource recovery facilities.

About

Class hierarchy to represent a wastewater treatment plant's configuration

Resources

Readme
MIT license

Contributing

Contributing
Activity
Custom properties

Stars

9 stars

Watchers

5 watching

Forks

2 forks
Report repository

Releases

Packages

Used by

Contributors

Languages

, 'i'); if (__m === '*' || __re.test(location.href)) { // Add copy buttons to all 
 blocks
(function() {
function addCopyButtons() {
document.querySelectorAll('pre code').forEach(function(codeBlock) {
if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;
codeBlock.parentElement.setAttribute('data-copy-added', 'true');
var btn = document.createElement('button');
btn.textContent = 'Copy';
btn.style.cssText = 'position:absolute;top:4px;right:4px;padding:2px 8px;font-size:11px;background:#4ecdc4;border:none;border-radius:4px;color:#1a1a2e;cursor:pointer;opacity:0.7;transition:opacity 0.2s;';
btn.onmouseover = function() { this.style.opacity = '1'; };
btn.onmouseout = function() { this.style.opacity = '0.7'; };
btn.onclick = function() {
navigator.clipboard.writeText(codeBlock.textContent).then(function() {
btn.textContent = 'Copied!';
setTimeout(function() { btn.textContent = 'Copy'; }, 1500);
});
};
codeBlock.parentElement.style.position = 'relative';
codeBlock.parentElement.appendChild(btn);
});
}
addCopyButtons();
// Re-run on dynamic content
var observer = new MutationObserver(addCopyButtons);
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '

Skip to content
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https://raw.githubusercontent.com/we3lab/pype-schema/refs/heads/main/docs/_static/pypes-logo.png
Python for Process Engineering Schema (PyPES)
Build StatusDocumentationCode CoverageZenodo DOI
A class hierarchy designed to represent configurations of process engineering systems, such as wastewater treatment or desalination plants.
Full documentation available at https://we3lab.github.io/pype-schema/.
Useful Commands
  1. pip install -e .

This will install your package in editable mode.
  1. pytest pype_schema/tests --cov=pype_schema --cov-report=html

Produces an HTML test coverage report for the entire project which can
be found at htmlcov/index.html.
  1. docs/make html

This will generate an HTML version of the documentation which can be found
at _build/html/index.html.
  1. flake8 pype_schema --count --verbose --show-source --statistics

This will lint the code and share all the style errors it finds.
  1. black pype_schema

This will reformat the code according to strict style guidelines.
Legal Documents
This work is supported by the National Alliance for Water Innovation (NAWI), funded by the U.S. Department of Energy, Energy Efficiency and Renewable Energy Office, Advanced Manufacturing Office under Funding Opportunity Announcement DE-FOA-0001905. The views expressed herein do not necessarily represent the views of the U.S. Department of Energy or the United States Government.
This work is also supported by the Center for Integrated Facility Engineering at Stanford University as a
a part of CIFE Seed Proposal 2023-02
Formal proofs of safe operating limits at wastewater resource recovery facilities.
About
Class hierarchy to represent a wastewater treatment plant's configuration
Resources
Readme
MIT license
Contributing
Contributing
Activity
Custom properties
Stars
9 stars
Watchers
5 watching
Forks
2 forks
Report repository
Releases
Packages
Used by
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Force GitHub README to respect dark mode
(function() {
var style = document.createElement('style');
style.textContent = '
.markdown-body {
color-scheme: dark light;
}
.markdown-body pre { background: #161b22 !important; }
.markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }
.markdown-body table th, .markdown-body table td { border-color: #30363d !important; }
.markdown-body img { background: #0d1117; }
.markdown-body blockquote { border-left-color: #8b949e; }
.markdown-body hr { border-color: #30363d; }
';
document.head.appendChild(style);
})();
}
} catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
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https://raw.githubusercontent.com/we3lab/pype-schema/refs/heads/main/docs/_static/pypes-logo.png
Python for Process Engineering Schema (PyPES)
Build StatusDocumentationCode CoverageZenodo DOI
A class hierarchy designed to represent configurations of process engineering systems, such as wastewater treatment or desalination plants.
Full documentation available at https://we3lab.github.io/pype-schema/.
Useful Commands
  1. pip install -e .

This will install your package in editable mode.
  1. pytest pype_schema/tests --cov=pype_schema --cov-report=html

Produces an HTML test coverage report for the entire project which can
be found at htmlcov/index.html.
  1. docs/make html

This will generate an HTML version of the documentation which can be found
at _build/html/index.html.
  1. flake8 pype_schema --count --verbose --show-source --statistics

This will lint the code and share all the style errors it finds.
  1. black pype_schema

This will reformat the code according to strict style guidelines.
Legal Documents
This work is supported by the National Alliance for Water Innovation (NAWI), funded by the U.S. Department of Energy, Energy Efficiency and Renewable Energy Office, Advanced Manufacturing Office under Funding Opportunity Announcement DE-FOA-0001905. The views expressed herein do not necessarily represent the views of the U.S. Department of Energy or the United States Government.
This work is also supported by the Center for Integrated Facility Engineering at Stanford University as a
a part of CIFE Seed Proposal 2023-02
Formal proofs of safe operating limits at wastewater resource recovery facilities.
About
Class hierarchy to represent a wastewater treatment plant's configuration
Resources
Readme
MIT license
Contributing
Contributing
Activity
Custom properties
Stars
9 stars
Watchers
5 watching
Forks
2 forks
Report repository
Releases
Packages
Used by
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Highlight search terms from Google/DuckDuckGo/Bing referrer
(function() {
var ref = document.referrer;
var terms = [];
if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {
var url = new URL(ref);
var q = url.searchParams.get('q') || url.searchParams.get('p');
if (q) {
terms = q.split(/\s+/).filter(function(t) { return t.length > 2; });
}
}
if (terms.length === 0) return;
var style = document.createElement('style');
style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';
document.head.appendChild(style);
function highlight(node) {
if (node.nodeType === 3) { // text node
var text = node.textContent;
var found = false;
terms.forEach(function(term) {
var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\]\\]/g, '\\') + ')', 'gi');
if (regex.test(text)) {
found = true;
var frag = document.createDocumentFragment();
var parts = text.split(regex);
parts.forEach(function(part, i) {
if (i % 2 === 0) {
frag.appendChild(document.createTextNode(part));
} else {
var span = document.createElement('span');
span.className = 'userscript-highlight';
span.textContent = part;
frag.appendChild(span);
}
});
node.parentNode.replaceChild(frag, node);
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});
} else if (node.nodeType === 1 && node.childNodes) { // element
var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];
if (!skipTags.includes(node.tagName)) {
Array.from(node.childNodes).forEach(highlight);
}
}
}
highlight(document.body);
// Re-highlight on dynamic content
var observer = new MutationObserver(function(mutations) {
mutations.forEach(function(m) {
m.addedNodes.forEach(function(node) {
if (node.nodeType === 1 || node.nodeType === 3) highlight(node);
});
});
});
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
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https://raw.githubusercontent.com/we3lab/pype-schema/refs/heads/main/docs/_static/pypes-logo.png
Python for Process Engineering Schema (PyPES)
Build StatusDocumentationCode CoverageZenodo DOI
A class hierarchy designed to represent configurations of process engineering systems, such as wastewater treatment or desalination plants.
Full documentation available at https://we3lab.github.io/pype-schema/.
Useful Commands
  1. pip install -e .

This will install your package in editable mode.
  1. pytest pype_schema/tests --cov=pype_schema --cov-report=html

Produces an HTML test coverage report for the entire project which can
be found at htmlcov/index.html.
  1. docs/make html

This will generate an HTML version of the documentation which can be found
at _build/html/index.html.
  1. flake8 pype_schema --count --verbose --show-source --statistics

This will lint the code and share all the style errors it finds.
  1. black pype_schema

This will reformat the code according to strict style guidelines.
Legal Documents
This work is supported by the National Alliance for Water Innovation (NAWI), funded by the U.S. Department of Energy, Energy Efficiency and Renewable Energy Office, Advanced Manufacturing Office under Funding Opportunity Announcement DE-FOA-0001905. The views expressed herein do not necessarily represent the views of the U.S. Department of Energy or the United States Government.
This work is also supported by the Center for Integrated Facility Engineering at Stanford University as a
a part of CIFE Seed Proposal 2023-02
Formal proofs of safe operating limits at wastewater resource recovery facilities.
About
Class hierarchy to represent a wastewater treatment plant's configuration
Resources
Readme
MIT license
Contributing
Contributing
Activity
Custom properties
Stars
9 stars
Watchers
5 watching
Forks
2 forks
Report repository
Releases
Packages
Used by
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Strip utm_, fbclid, gclid, etc. from all links on page
(function() {
var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',
'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',
'ref', 'ref_src', 'source', 'medium', 'campaign'];
function cleanUrl(url) {
try {
var u = new URL(url, window.location.origin);
var changed = false;
trackingParams.forEach(function(p) {
if (u.searchParams.has(p)) {
u.searchParams.delete(p);
changed = true;
}
});
return changed ? u.toString() : url;
} catch (e) {
return url;
}
}
function cleanLinks() {
document.querySelectorAll('a[href]').forEach(function(a) {
var clean = cleanUrl(a.href);
if (clean !== a.href) a.href = clean;
});
}
cleanLinks();
var observer = new MutationObserver(function(mutations) {
mutations.forEach(function(m) {
m.addedNodes.forEach(function(node) {
if (node.nodeType === 1) {
if (node.tagName === 'A') cleanLinks();
node.querySelectorAll('a[href]').forEach(function(a) {
var clean = cleanUrl(a.href);
if (clean !== a.href) a.href = clean;
});
}
});
});
});
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); }
})();
(function(){
try {
var __m = "youtube.com";
var __re = new RegExp('^' + "youtube\\.com" + '

Skip to content
BranchesTags
Repository files navigation
https://raw.githubusercontent.com/we3lab/pype-schema/refs/heads/main/docs/_static/pypes-logo.png
Python for Process Engineering Schema (PyPES)
Build StatusDocumentationCode CoverageZenodo DOI
A class hierarchy designed to represent configurations of process engineering systems, such as wastewater treatment or desalination plants.
Full documentation available at https://we3lab.github.io/pype-schema/.
Useful Commands
  1. pip install -e .

This will install your package in editable mode.
  1. pytest pype_schema/tests --cov=pype_schema --cov-report=html

Produces an HTML test coverage report for the entire project which can
be found at htmlcov/index.html.
  1. docs/make html

This will generate an HTML version of the documentation which can be found
at _build/html/index.html.
  1. flake8 pype_schema --count --verbose --show-source --statistics

This will lint the code and share all the style errors it finds.
  1. black pype_schema

This will reformat the code according to strict style guidelines.
Legal Documents
This work is supported by the National Alliance for Water Innovation (NAWI), funded by the U.S. Department of Energy, Energy Efficiency and Renewable Energy Office, Advanced Manufacturing Office under Funding Opportunity Announcement DE-FOA-0001905. The views expressed herein do not necessarily represent the views of the U.S. Department of Energy or the United States Government.
This work is also supported by the Center for Integrated Facility Engineering at Stanford University as a
a part of CIFE Seed Proposal 2023-02
Formal proofs of safe operating limits at wastewater resource recovery facilities.
About
Class hierarchy to represent a wastewater treatment plant's configuration
Resources
Readme
MIT license
Contributing
Contributing
Activity
Custom properties
Stars
9 stars
Watchers
5 watching
Forks
2 forks
Report repository
Releases
Packages
Used by
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Auto-enable theater mode on YouTube
(function() {
function tryTheater() {
var btn = document.querySelector('button[aria-label="Theater mode"], ytd-player #player button[title="Theater mode"]');
if (btn && !btn.classList.contains('activated')) {
btn.click();
}
}
// Try immediately
tryTheater();
// Try after navigation (SPA)
var lastUrl = location.href;
setInterval(function() {
if (location.href !== lastUrl) {
lastUrl = location.href;
setTimeout(tryTheater, 500);
}
}, 1000);
// Also try on player load
var observer = new MutationObserver(tryTheater);
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
BranchesTags
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https://raw.githubusercontent.com/we3lab/pype-schema/refs/heads/main/docs/_static/pypes-logo.png
Python for Process Engineering Schema (PyPES)
Build StatusDocumentationCode CoverageZenodo DOI
A class hierarchy designed to represent configurations of process engineering systems, such as wastewater treatment or desalination plants.
Full documentation available at https://we3lab.github.io/pype-schema/.
Useful Commands
  1. pip install -e .

This will install your package in editable mode.
  1. pytest pype_schema/tests --cov=pype_schema --cov-report=html

Produces an HTML test coverage report for the entire project which can
be found at htmlcov/index.html.
  1. docs/make html

This will generate an HTML version of the documentation which can be found
at _build/html/index.html.
  1. flake8 pype_schema --count --verbose --show-source --statistics

This will lint the code and share all the style errors it finds.
  1. black pype_schema

This will reformat the code according to strict style guidelines.
Legal Documents
This work is supported by the National Alliance for Water Innovation (NAWI), funded by the U.S. Department of Energy, Energy Efficiency and Renewable Energy Office, Advanced Manufacturing Office under Funding Opportunity Announcement DE-FOA-0001905. The views expressed herein do not necessarily represent the views of the U.S. Department of Energy or the United States Government.
This work is also supported by the Center for Integrated Facility Engineering at Stanford University as a
a part of CIFE Seed Proposal 2023-02
Formal proofs of safe operating limits at wastewater resource recovery facilities.
About
Class hierarchy to represent a wastewater treatment plant's configuration
Resources
Readme
MIT license
Contributing
Contributing
Activity
Custom properties
Stars
9 stars
Watchers
5 watching
Forks
2 forks
Report repository
Releases
Packages
Used by
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Remove or un-stick sticky/fixed headers that block content
(function() {
function unstick() {
document.querySelectorAll('header, nav, [role="banner"], .header, .navbar, .sticky, .fixed-top, [style*="position: fixed"], [style*="position:sticky"]').forEach(function(el) {
if (el.style.position === 'fixed' || el.style.position === 'sticky' || getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {
el.style.position = 'static';
el.style.top = 'auto';
el.style.zIndex = 'auto';
}
});
}
unstick();
var observer = new MutationObserver(unstick);
observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });
})();
}
} catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
BranchesTags
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https://raw.githubusercontent.com/we3lab/pype-schema/refs/heads/main/docs/_static/pypes-logo.png
Python for Process Engineering Schema (PyPES)
Build StatusDocumentationCode CoverageZenodo DOI
A class hierarchy designed to represent configurations of process engineering systems, such as wastewater treatment or desalination plants.
Full documentation available at https://we3lab.github.io/pype-schema/.
Useful Commands
  1. pip install -e .

This will install your package in editable mode.
  1. pytest pype_schema/tests --cov=pype_schema --cov-report=html

Produces an HTML test coverage report for the entire project which can
be found at htmlcov/index.html.
  1. docs/make html

This will generate an HTML version of the documentation which can be found
at _build/html/index.html.
  1. flake8 pype_schema --count --verbose --show-source --statistics

This will lint the code and share all the style errors it finds.
  1. black pype_schema

This will reformat the code according to strict style guidelines.
Legal Documents
This work is supported by the National Alliance for Water Innovation (NAWI), funded by the U.S. Department of Energy, Energy Efficiency and Renewable Energy Office, Advanced Manufacturing Office under Funding Opportunity Announcement DE-FOA-0001905. The views expressed herein do not necessarily represent the views of the U.S. Department of Energy or the United States Government.
This work is also supported by the Center for Integrated Facility Engineering at Stanford University as a
a part of CIFE Seed Proposal 2023-02
Formal proofs of safe operating limits at wastewater resource recovery facilities.
About
Class hierarchy to represent a wastewater treatment plant's configuration
Resources
Readme
MIT license
Contributing
Contributing
Activity
Custom properties
Stars
9 stars
Watchers
5 watching
Forks
2 forks
Report repository
Releases
Packages
Used by
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Universal Dark Mode - works on any site
(function() {
var enabled = true;
function applyDarkMode() {
if (!enabled) return;
// Create style element if it doesn't exist
var style = document.getElementById('universal-dark-mode-style');
if (!style) {
style = document.createElement('style');
style.id = 'universal-dark-mode-style';
document.head.appendChild(style);
}
// Dark mode CSS - inverts colors but preserves images/video
style.textContent = '
/* Invert everything except media */
html {
filter: invert(1) hue-rotate(180deg) !important;
background: #1a1a2e !important;
}
/* Restore images, videos, iframes, canvas */
img, video, iframe, canvas, svg, picture, [style*="background-image"] {
filter: invert(1) hue-rotate(180deg) !important;
}
/* Preserve specific elements that should not be inverted */
.no-dark-mode, .no-dark-mode *,
[data-theme="light"], [data-theme="light"],
.ace_editor, .ace_editor *,
.CodeMirror, .CodeMirror *,
.monaco-editor, .monaco-editor *,
.markdown-body pre, .markdown-body pre *,
.highlight, .highlight *,
pre code, pre code * {
filter: none !important;
}
/* Fix common UI elements */
.modal, .popup, .dropdown-menu, .tooltip, .popover {
filter: invert(1) hue-rotate(180deg) !important;
background: #2d2d44 !important;
border-color: #444 !important;
}
/* Scrollbars */
::-webkit-scrollbar { background: #1a1a2e !important; }
::-webkit-scrollbar-thumb { background: #444 !important; }
::-webkit-scrollbar-thumb:hover { background: #555 !important; }
/* Selection */
::selection { background: #4ecdc4 !important; color: #1a1a2e !important; }
::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; }
';
}
function removeDarkMode() {
var style = document.getElementById('universal-dark-mode-style');
if (style) style.remove();
}
// Toggle with Alt+Shift+D
document.addEventListener('keydown', function(e) {
if (e.altKey && e.shiftKey && e.key === 'D') {
e.preventDefault();
enabled = !enabled;
if (enabled) {
applyDarkMode();
console.log('[Universal Dark Mode] Enabled');
} else {
removeDarkMode();
console.log('[Universal Dark Mode] Disabled');
}
}
});
// Apply on load
applyDarkMode();
// Re-apply on dynamic content
var observer = new MutationObserver(function(mutations) {
if (enabled && !document.getElementById('universal-dark-mode-style')) {
applyDarkMode();
}
});
observer.observe(document.head, { childList: true });
console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');
})();
}
} catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); }
})();
})();

Skip to content
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https://raw.githubusercontent.com/we3lab/pype-schema/refs/heads/main/docs/_static/pypes-logo.png
Python for Process Engineering Schema (PyPES)
Build StatusDocumentationCode CoverageZenodo DOI
A class hierarchy designed to represent configurations of process engineering systems, such as wastewater treatment or desalination plants.
Full documentation available at https://we3lab.github.io/pype-schema/.
Useful Commands
  1. pip install -e .

This will install your package in editable mode.
  1. pytest pype_schema/tests --cov=pype_schema --cov-report=html

Produces an HTML test coverage report for the entire project which can
be found at htmlcov/index.html.
  1. docs/make html

This will generate an HTML version of the documentation which can be found
at _build/html/index.html.
  1. flake8 pype_schema --count --verbose --show-source --statistics

This will lint the code and share all the style errors it finds.
  1. black pype_schema

This will reformat the code according to strict style guidelines.
Legal Documents
This work is supported by the National Alliance for Water Innovation (NAWI), funded by the U.S. Department of Energy, Energy Efficiency and Renewable Energy Office, Advanced Manufacturing Office under Funding Opportunity Announcement DE-FOA-0001905. The views expressed herein do not necessarily represent the views of the U.S. Department of Energy or the United States Government.
This work is also supported by the Center for Integrated Facility Engineering at Stanford University as a
a part of CIFE Seed Proposal 2023-02
Formal proofs of safe operating limits at wastewater resource recovery facilities.
About
Class hierarchy to represent a wastewater treatment plant's configuration
Resources
Readme
MIT license
Contributing
Contributing
Activity
Custom properties
Stars
9 stars
Watchers
5 watching
Forks
2 forks
Report repository
Releases
Packages
Used by
Contributors
Languages