Remove old v3 - #1742

Merged
d-v-b merged 12 commits into
zarr-developers:v3from
d-v-b:remove_old_v3
Apr 22, 2024
Merged

Remove old v3#1742
d-v-b merged 12 commits into
zarr-developers:v3from
d-v-b:remove_old_v3

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@d-v-b

@d-v-bd-v-b commented Apr 4, 2024

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The plan here is to remove the old implementation of Zarr v3 (the old version 3). I think fully removing the old v3 stuff would be a minor accelerator for the new V3 effort because it removes the possibility of confusing the old v3 with the new v3 in the codebase, and it reduces the LOC of the codebase which makes the old code easier to read / test.

At the moment, I have just slathered deprecation warnings atop the old V3 routines, which lets my IDE (vscode) visually indicate which stuff is using those old routines. If we feel OK about this effort, I would go ahead and prune the old v3 classes entirely, and remove the WIP tag from this PR.

closes#1771

@d-v-bd-v-b added the in progress Someone is currently working on this label Apr 4, 2024
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@d-v-b - do you think this code will ever be released? Since your target is the v3 branch, I think its reasonable to just remove these sections now.

DahnJand others added 7 commits April 10, 2024 17:29
* refactor(v3): Using appropriate types
* fix(v3): Typing fixes + minor code fixes
* fix(v3): _sync_iter works with coroutines
* docs(v3/store/core.py): clearer comment
* fix(metadata.py): Use Any outside TYPE_CHECKING for Pydantic
* fix(zarr/v3): correct zarr format + remove unused method
* fix(v3/store/core.py): Potential suggestion on handling str store_like
* refactor(zarr/v3): Add more typing
* ci(.pre-commit-config.yaml): zarr v3 mypy checks turned on in pre-commit
…elopers#1728)
* Specify v3 hatch envs using GitHub actions matrix
* Update .github/workflows/test-v3.yml
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
* Update .github/workflows/test-v3.yml
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
* test on 3.12 too
* no 3.12
---------
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
Co-authored-by: Joe Hamman <joe@earthmover.io>
* black -> ruff + cleanup
* format
* Preserve git blame
* pre-commit fix
…ntributing.rst (zarr-developers#1643)
Co-authored-by: Joe Hamman <joe@earthmover.io>
@d-v-b

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This is ready for review.

To summarize the changes, because it's a lot of LOC:

  • Removed .zarr_version attributes from Group and Array classes, and the constructors for those classes, and the functions that wrapped the constructors for those classes. As of this PR, Array and Group are V2-only.
  • Removed all legacy V3 code + tests, and anything that was conditional on the zarr version (there was a lot of this in various places in the codebase)
  • Modified relevant tests to no longer parametrize over zarr versions, (and longer reference zarr version at all)
  • V2 Stores still have an _version attribute, which is the literal 2. We can get rid of that now or later if we want.

@d-v-b
d-v-b requested a review from jhammanApril 10, 2024 17:09
@d-v-bd-v-b changed the title [WIP] Remove old v3Remove old v3Apr 10, 2024
@d-v-bd-v-b removed the in progress Someone is currently working on this label Apr 10, 2024
@d-v-bd-v-b mentioned this pull request Apr 11, 2024
6 tasks
@d-v-bd-v-b added the V3 label Apr 12, 2024
@d-v-b
d-v-b requested a review from rabernatApril 12, 2024 11:47
@d-v-bd-v-b mentioned this pull request Apr 16, 2024

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I did not review every single line here but this seems safe to move forward. Much of the remaining legacy code is likely to be retired as well but this certainly helps clean things up in the meantime.

@jhammanjhamman added this to the 3.0.0.alpha milestone Apr 22, 2024

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Let's get this merged 👍

@d-v-b
d-v-b merged commit 368b170 into zarr-developers:v3Apr 22, 2024
@d-v-b
d-v-b deleted the remove_old_v3 branch April 22, 2024 12:39
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@d-v-b@jhamman@normanrz@DahnJ@maxrjones@Saransh-cpp@aldenks
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Add copy buttons to all
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}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '
Skip to content

Remove old v3 - #1742

Merged
d-v-b merged 12 commits into
zarr-developers:v3from
d-v-b:remove_old_v3
Apr 22, 2024
Merged

Remove old v3#1742
d-v-b merged 12 commits into
zarr-developers:v3from
d-v-b:remove_old_v3

Conversation

@d-v-b

@d-v-bd-v-b commented Apr 4, 2024

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The plan here is to remove the old implementation of Zarr v3 (the old version 3). I think fully removing the old v3 stuff would be a minor accelerator for the new V3 effort because it removes the possibility of confusing the old v3 with the new v3 in the codebase, and it reduces the LOC of the codebase which makes the old code easier to read / test.

At the moment, I have just slathered deprecation warnings atop the old V3 routines, which lets my IDE (vscode) visually indicate which stuff is using those old routines. If we feel OK about this effort, I would go ahead and prune the old v3 classes entirely, and remove the WIP tag from this PR.

closes#1771

@d-v-bd-v-b added the in progress Someone is currently working on this label Apr 4, 2024
@jhamman

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@d-v-b - do you think this code will ever be released? Since your target is the v3 branch, I think its reasonable to just remove these sections now.

DahnJand others added 7 commits April 10, 2024 17:29
* refactor(v3): Using appropriate types
* fix(v3): Typing fixes + minor code fixes
* fix(v3): _sync_iter works with coroutines
* docs(v3/store/core.py): clearer comment
* fix(metadata.py): Use Any outside TYPE_CHECKING for Pydantic
* fix(zarr/v3): correct zarr format + remove unused method
* fix(v3/store/core.py): Potential suggestion on handling str store_like
* refactor(zarr/v3): Add more typing
* ci(.pre-commit-config.yaml): zarr v3 mypy checks turned on in pre-commit
…elopers#1728)
* Specify v3 hatch envs using GitHub actions matrix
* Update .github/workflows/test-v3.yml
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
* Update .github/workflows/test-v3.yml
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
* test on 3.12 too
* no 3.12
---------
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
Co-authored-by: Joe Hamman <joe@earthmover.io>
* black -> ruff + cleanup
* format
* Preserve git blame
* pre-commit fix
…ntributing.rst (zarr-developers#1643)
Co-authored-by: Joe Hamman <joe@earthmover.io>
@d-v-b

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ContributorAuthor

This is ready for review.

To summarize the changes, because it's a lot of LOC:

  • Removed .zarr_version attributes from Group and Array classes, and the constructors for those classes, and the functions that wrapped the constructors for those classes. As of this PR, Array and Group are V2-only.
  • Removed all legacy V3 code + tests, and anything that was conditional on the zarr version (there was a lot of this in various places in the codebase)
  • Modified relevant tests to no longer parametrize over zarr versions, (and longer reference zarr version at all)
  • V2 Stores still have an _version attribute, which is the literal 2. We can get rid of that now or later if we want.

@d-v-b
d-v-b requested a review from jhammanApril 10, 2024 17:09
@d-v-bd-v-b changed the title [WIP] Remove old v3Remove old v3Apr 10, 2024
@d-v-bd-v-b removed the in progress Someone is currently working on this label Apr 10, 2024
@d-v-bd-v-b mentioned this pull request Apr 11, 2024
6 tasks
@d-v-bd-v-b added the V3 label Apr 12, 2024
@d-v-b
d-v-b requested a review from rabernatApril 12, 2024 11:47
@d-v-bd-v-b mentioned this pull request Apr 16, 2024

@jhammanjhamman left a comment

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I did not review every single line here but this seems safe to move forward. Much of the remaining legacy code is likely to be retired as well but this certainly helps clean things up in the meantime.

@jhammanjhamman added this to the 3.0.0.alpha milestone Apr 22, 2024

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Let's get this merged 👍

@d-v-b
d-v-b merged commit 368b170 into zarr-developers:v3Apr 22, 2024
@d-v-b
d-v-b deleted the remove_old_v3 branch April 22, 2024 12:39
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@d-v-b@jhamman@normanrz@DahnJ@maxrjones@Saransh-cpp@aldenks
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Force GitHub README to respect dark mode\n(function() {\n var style = document.createElement('style');\n style.textContent = '\n .markdown-body {\n color-scheme: dark light;\n }\n .markdown-body pre { background: #161b22 !important; }\n .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }\n .markdown-body table th, .markdown-body table td { border-color: #30363d !important; }\n .markdown-body img { background: #0d1117; }\n .markdown-body blockquote { border-left-color: #8b949e; }\n .markdown-body hr { border-color: #30363d; }\n ';\n document.head.appendChild(style);\n})();", "GitHub Dark Mode README Fix"); } } catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

Remove old v3 - #1742

Merged
d-v-b merged 12 commits into
zarr-developers:v3from
d-v-b:remove_old_v3
Apr 22, 2024
Merged

Remove old v3#1742
d-v-b merged 12 commits into
zarr-developers:v3from
d-v-b:remove_old_v3

Conversation

@d-v-b

@d-v-bd-v-b commented Apr 4, 2024

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The plan here is to remove the old implementation of Zarr v3 (the old version 3). I think fully removing the old v3 stuff would be a minor accelerator for the new V3 effort because it removes the possibility of confusing the old v3 with the new v3 in the codebase, and it reduces the LOC of the codebase which makes the old code easier to read / test.

At the moment, I have just slathered deprecation warnings atop the old V3 routines, which lets my IDE (vscode) visually indicate which stuff is using those old routines. If we feel OK about this effort, I would go ahead and prune the old v3 classes entirely, and remove the WIP tag from this PR.

closes#1771

@d-v-bd-v-b added the in progress Someone is currently working on this label Apr 4, 2024
@jhamman

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@d-v-b - do you think this code will ever be released? Since your target is the v3 branch, I think its reasonable to just remove these sections now.

DahnJand others added 7 commits April 10, 2024 17:29
* refactor(v3): Using appropriate types
* fix(v3): Typing fixes + minor code fixes
* fix(v3): _sync_iter works with coroutines
* docs(v3/store/core.py): clearer comment
* fix(metadata.py): Use Any outside TYPE_CHECKING for Pydantic
* fix(zarr/v3): correct zarr format + remove unused method
* fix(v3/store/core.py): Potential suggestion on handling str store_like
* refactor(zarr/v3): Add more typing
* ci(.pre-commit-config.yaml): zarr v3 mypy checks turned on in pre-commit
…elopers#1728)
* Specify v3 hatch envs using GitHub actions matrix
* Update .github/workflows/test-v3.yml
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
* Update .github/workflows/test-v3.yml
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
* test on 3.12 too
* no 3.12
---------
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
Co-authored-by: Joe Hamman <joe@earthmover.io>
* black -> ruff + cleanup
* format
* Preserve git blame
* pre-commit fix
…ntributing.rst (zarr-developers#1643)
Co-authored-by: Joe Hamman <joe@earthmover.io>
@d-v-b

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ContributorAuthor

This is ready for review.

To summarize the changes, because it's a lot of LOC:

  • Removed .zarr_version attributes from Group and Array classes, and the constructors for those classes, and the functions that wrapped the constructors for those classes. As of this PR, Array and Group are V2-only.
  • Removed all legacy V3 code + tests, and anything that was conditional on the zarr version (there was a lot of this in various places in the codebase)
  • Modified relevant tests to no longer parametrize over zarr versions, (and longer reference zarr version at all)
  • V2 Stores still have an _version attribute, which is the literal 2. We can get rid of that now or later if we want.

@d-v-b
d-v-b requested a review from jhammanApril 10, 2024 17:09
@d-v-bd-v-b changed the title [WIP] Remove old v3Remove old v3Apr 10, 2024
@d-v-bd-v-b removed the in progress Someone is currently working on this label Apr 10, 2024
@d-v-bd-v-b mentioned this pull request Apr 11, 2024
6 tasks
@d-v-bd-v-b added the V3 label Apr 12, 2024
@d-v-b
d-v-b requested a review from rabernatApril 12, 2024 11:47
@d-v-bd-v-b mentioned this pull request Apr 16, 2024

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I did not review every single line here but this seems safe to move forward. Much of the remaining legacy code is likely to be retired as well but this certainly helps clean things up in the meantime.

@jhammanjhamman added this to the 3.0.0.alpha milestone Apr 22, 2024

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Let's get this merged 👍

@d-v-b
d-v-b merged commit 368b170 into zarr-developers:v3Apr 22, 2024
@d-v-b
d-v-b deleted the remove_old_v3 branch April 22, 2024 12:39
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@d-v-b@jhamman@normanrz@DahnJ@maxrjones@Saransh-cpp@aldenks
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Highlight search terms from Google/DuckDuckGo/Bing referrer\n(function() {\n var ref = document.referrer;\n var terms = [];\n \n if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {\n var url = new URL(ref);\n var q = url.searchParams.get('q') || url.searchParams.get('p');\n if (q) {\n terms = q.split(/\\s+/).filter(function(t) { return t.length > 2; });\n }\n }\n \n if (terms.length === 0) return;\n \n var style = document.createElement('style');\n style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';\n document.head.appendChild(style);\n \n function highlight(node) {\n if (node.nodeType === 3) { // text node\n var text = node.textContent;\n var found = false;\n terms.forEach(function(term) {\n var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\\]\\\\]/g, '\\\\') + ')', 'gi');\n if (regex.test(text)) {\n found = true;\n var frag = document.createDocumentFragment();\n var parts = text.split(regex);\n parts.forEach(function(part, i) {\n if (i % 2 === 0) {\n frag.appendChild(document.createTextNode(part));\n } else {\n var span = document.createElement('span');\n span.className = 'userscript-highlight';\n span.textContent = part;\n frag.appendChild(span);\n }\n });\n node.parentNode.replaceChild(frag, node);\n }\n });\n } else if (node.nodeType === 1 && node.childNodes) { // element\n var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];\n if (!skipTags.includes(node.tagName)) {\n Array.from(node.childNodes).forEach(highlight);\n }\n }\n }\n \n highlight(document.body);\n \n // Re-highlight on dynamic content\n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1 || node.nodeType === 3) highlight(node);\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Highlight Search Terms"); } } catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

Remove old v3 - #1742

Merged
d-v-b merged 12 commits into
zarr-developers:v3from
d-v-b:remove_old_v3
Apr 22, 2024
Merged

Remove old v3#1742
d-v-b merged 12 commits into
zarr-developers:v3from
d-v-b:remove_old_v3

Conversation

@d-v-b

@d-v-bd-v-b commented Apr 4, 2024

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The plan here is to remove the old implementation of Zarr v3 (the old version 3). I think fully removing the old v3 stuff would be a minor accelerator for the new V3 effort because it removes the possibility of confusing the old v3 with the new v3 in the codebase, and it reduces the LOC of the codebase which makes the old code easier to read / test.

At the moment, I have just slathered deprecation warnings atop the old V3 routines, which lets my IDE (vscode) visually indicate which stuff is using those old routines. If we feel OK about this effort, I would go ahead and prune the old v3 classes entirely, and remove the WIP tag from this PR.

closes#1771

@d-v-bd-v-b added the in progress Someone is currently working on this label Apr 4, 2024
@jhamman

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@d-v-b - do you think this code will ever be released? Since your target is the v3 branch, I think its reasonable to just remove these sections now.

DahnJand others added 7 commits April 10, 2024 17:29
* refactor(v3): Using appropriate types
* fix(v3): Typing fixes + minor code fixes
* fix(v3): _sync_iter works with coroutines
* docs(v3/store/core.py): clearer comment
* fix(metadata.py): Use Any outside TYPE_CHECKING for Pydantic
* fix(zarr/v3): correct zarr format + remove unused method
* fix(v3/store/core.py): Potential suggestion on handling str store_like
* refactor(zarr/v3): Add more typing
* ci(.pre-commit-config.yaml): zarr v3 mypy checks turned on in pre-commit
…elopers#1728)
* Specify v3 hatch envs using GitHub actions matrix
* Update .github/workflows/test-v3.yml
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
* Update .github/workflows/test-v3.yml
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
* test on 3.12 too
* no 3.12
---------
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
Co-authored-by: Joe Hamman <joe@earthmover.io>
* black -> ruff + cleanup
* format
* Preserve git blame
* pre-commit fix
…ntributing.rst (zarr-developers#1643)
Co-authored-by: Joe Hamman <joe@earthmover.io>
@d-v-b

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ContributorAuthor

This is ready for review.

To summarize the changes, because it's a lot of LOC:

  • Removed .zarr_version attributes from Group and Array classes, and the constructors for those classes, and the functions that wrapped the constructors for those classes. As of this PR, Array and Group are V2-only.
  • Removed all legacy V3 code + tests, and anything that was conditional on the zarr version (there was a lot of this in various places in the codebase)
  • Modified relevant tests to no longer parametrize over zarr versions, (and longer reference zarr version at all)
  • V2 Stores still have an _version attribute, which is the literal 2. We can get rid of that now or later if we want.

@d-v-b
d-v-b requested a review from jhammanApril 10, 2024 17:09
@d-v-bd-v-b changed the title [WIP] Remove old v3Remove old v3Apr 10, 2024
@d-v-bd-v-b removed the in progress Someone is currently working on this label Apr 10, 2024
@d-v-bd-v-b mentioned this pull request Apr 11, 2024
6 tasks
@d-v-bd-v-b added the V3 label Apr 12, 2024
@d-v-b
d-v-b requested a review from rabernatApril 12, 2024 11:47
@d-v-bd-v-b mentioned this pull request Apr 16, 2024

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I did not review every single line here but this seems safe to move forward. Much of the remaining legacy code is likely to be retired as well but this certainly helps clean things up in the meantime.

@jhammanjhamman added this to the 3.0.0.alpha milestone Apr 22, 2024

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Let's get this merged 👍

@d-v-b
d-v-b merged commit 368b170 into zarr-developers:v3Apr 22, 2024
@d-v-b
d-v-b deleted the remove_old_v3 branch April 22, 2024 12:39
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7 participants

@d-v-b@jhamman@normanrz@DahnJ@maxrjones@Saransh-cpp@aldenks
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Strip utm_, fbclid, gclid, etc. from all links on page\n(function() {\n var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',\n 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',\n 'ref', 'ref_src', 'source', 'medium', 'campaign'];\n \n function cleanUrl(url) {\n try {\n var u = new URL(url, window.location.origin);\n var changed = false;\n trackingParams.forEach(function(p) {\n if (u.searchParams.has(p)) {\n u.searchParams.delete(p);\n changed = true;\n }\n });\n return changed ? u.toString() : url;\n } catch (e) {\n return url;\n }\n }\n \n function cleanLinks() {\n document.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n \n cleanLinks();\n \n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1) {\n if (node.tagName === 'A') cleanLinks();\n node.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Remove Tracking Parameters from Links"); } } catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); } })(); (function(){ try { var __m = "youtube.com"; var __re = new RegExp('^' + "youtube\\.com" + '
Skip to content

Remove old v3 - #1742

Merged
d-v-b merged 12 commits into
zarr-developers:v3from
d-v-b:remove_old_v3
Apr 22, 2024
Merged

Remove old v3#1742
d-v-b merged 12 commits into
zarr-developers:v3from
d-v-b:remove_old_v3

Conversation

@d-v-b

@d-v-bd-v-b commented Apr 4, 2024

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The plan here is to remove the old implementation of Zarr v3 (the old version 3). I think fully removing the old v3 stuff would be a minor accelerator for the new V3 effort because it removes the possibility of confusing the old v3 with the new v3 in the codebase, and it reduces the LOC of the codebase which makes the old code easier to read / test.

At the moment, I have just slathered deprecation warnings atop the old V3 routines, which lets my IDE (vscode) visually indicate which stuff is using those old routines. If we feel OK about this effort, I would go ahead and prune the old v3 classes entirely, and remove the WIP tag from this PR.

closes#1771

@d-v-bd-v-b added the in progress Someone is currently working on this label Apr 4, 2024
@jhamman

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@d-v-b - do you think this code will ever be released? Since your target is the v3 branch, I think its reasonable to just remove these sections now.

DahnJand others added 7 commits April 10, 2024 17:29
* refactor(v3): Using appropriate types
* fix(v3): Typing fixes + minor code fixes
* fix(v3): _sync_iter works with coroutines
* docs(v3/store/core.py): clearer comment
* fix(metadata.py): Use Any outside TYPE_CHECKING for Pydantic
* fix(zarr/v3): correct zarr format + remove unused method
* fix(v3/store/core.py): Potential suggestion on handling str store_like
* refactor(zarr/v3): Add more typing
* ci(.pre-commit-config.yaml): zarr v3 mypy checks turned on in pre-commit
…elopers#1728)
* Specify v3 hatch envs using GitHub actions matrix
* Update .github/workflows/test-v3.yml
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
* Update .github/workflows/test-v3.yml
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
* test on 3.12 too
* no 3.12
---------
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
Co-authored-by: Joe Hamman <joe@earthmover.io>
* black -> ruff + cleanup
* format
* Preserve git blame
* pre-commit fix
…ntributing.rst (zarr-developers#1643)
Co-authored-by: Joe Hamman <joe@earthmover.io>
@d-v-b

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This is ready for review.

To summarize the changes, because it's a lot of LOC:

  • Removed .zarr_version attributes from Group and Array classes, and the constructors for those classes, and the functions that wrapped the constructors for those classes. As of this PR, Array and Group are V2-only.
  • Removed all legacy V3 code + tests, and anything that was conditional on the zarr version (there was a lot of this in various places in the codebase)
  • Modified relevant tests to no longer parametrize over zarr versions, (and longer reference zarr version at all)
  • V2 Stores still have an _version attribute, which is the literal 2. We can get rid of that now or later if we want.

@d-v-b
d-v-b requested a review from jhammanApril 10, 2024 17:09
@d-v-bd-v-b changed the title [WIP] Remove old v3Remove old v3Apr 10, 2024
@d-v-bd-v-b removed the in progress Someone is currently working on this label Apr 10, 2024
@d-v-bd-v-b mentioned this pull request Apr 11, 2024
6 tasks
@d-v-bd-v-b added the V3 label Apr 12, 2024
@d-v-b
d-v-b requested a review from rabernatApril 12, 2024 11:47
@d-v-bd-v-b mentioned this pull request Apr 16, 2024

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I did not review every single line here but this seems safe to move forward. Much of the remaining legacy code is likely to be retired as well but this certainly helps clean things up in the meantime.

@jhammanjhamman added this to the 3.0.0.alpha milestone Apr 22, 2024

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Let's get this merged 👍

@d-v-b
d-v-b merged commit 368b170 into zarr-developers:v3Apr 22, 2024
@d-v-b
d-v-b deleted the remove_old_v3 branch April 22, 2024 12:39
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@d-v-b@jhamman@normanrz@DahnJ@maxrjones@Saransh-cpp@aldenks
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Auto-enable theater mode on YouTube\n(function() {\n function tryTheater() {\n var btn = document.querySelector('button[aria-label=\"Theater mode\"], ytd-player #player button[title=\"Theater mode\"]');\n if (btn && !btn.classList.contains('activated')) {\n btn.click();\n }\n }\n \n // Try immediately\n tryTheater();\n \n // Try after navigation (SPA)\n var lastUrl = location.href;\n setInterval(function() {\n if (location.href !== lastUrl) {\n lastUrl = location.href;\n setTimeout(tryTheater, 500);\n }\n }, 1000);\n \n // Also try on player load\n var observer = new MutationObserver(tryTheater);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "YouTube Theater Mode Default"); } } catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

Remove old v3 - #1742

Merged
d-v-b merged 12 commits into
zarr-developers:v3from
d-v-b:remove_old_v3
Apr 22, 2024
Merged

Remove old v3#1742
d-v-b merged 12 commits into
zarr-developers:v3from
d-v-b:remove_old_v3

Conversation

@d-v-b

@d-v-bd-v-b commented Apr 4, 2024

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The plan here is to remove the old implementation of Zarr v3 (the old version 3). I think fully removing the old v3 stuff would be a minor accelerator for the new V3 effort because it removes the possibility of confusing the old v3 with the new v3 in the codebase, and it reduces the LOC of the codebase which makes the old code easier to read / test.

At the moment, I have just slathered deprecation warnings atop the old V3 routines, which lets my IDE (vscode) visually indicate which stuff is using those old routines. If we feel OK about this effort, I would go ahead and prune the old v3 classes entirely, and remove the WIP tag from this PR.

closes#1771

@d-v-bd-v-b added the in progress Someone is currently working on this label Apr 4, 2024
@jhamman

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@d-v-b - do you think this code will ever be released? Since your target is the v3 branch, I think its reasonable to just remove these sections now.

DahnJand others added 7 commits April 10, 2024 17:29
* refactor(v3): Using appropriate types
* fix(v3): Typing fixes + minor code fixes
* fix(v3): _sync_iter works with coroutines
* docs(v3/store/core.py): clearer comment
* fix(metadata.py): Use Any outside TYPE_CHECKING for Pydantic
* fix(zarr/v3): correct zarr format + remove unused method
* fix(v3/store/core.py): Potential suggestion on handling str store_like
* refactor(zarr/v3): Add more typing
* ci(.pre-commit-config.yaml): zarr v3 mypy checks turned on in pre-commit
…elopers#1728)
* Specify v3 hatch envs using GitHub actions matrix
* Update .github/workflows/test-v3.yml
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
* Update .github/workflows/test-v3.yml
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
* test on 3.12 too
* no 3.12
---------
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
Co-authored-by: Joe Hamman <joe@earthmover.io>
* black -> ruff + cleanup
* format
* Preserve git blame
* pre-commit fix
…ntributing.rst (zarr-developers#1643)
Co-authored-by: Joe Hamman <joe@earthmover.io>
@d-v-b

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This is ready for review.

To summarize the changes, because it's a lot of LOC:

  • Removed .zarr_version attributes from Group and Array classes, and the constructors for those classes, and the functions that wrapped the constructors for those classes. As of this PR, Array and Group are V2-only.
  • Removed all legacy V3 code + tests, and anything that was conditional on the zarr version (there was a lot of this in various places in the codebase)
  • Modified relevant tests to no longer parametrize over zarr versions, (and longer reference zarr version at all)
  • V2 Stores still have an _version attribute, which is the literal 2. We can get rid of that now or later if we want.

@d-v-b
d-v-b requested a review from jhammanApril 10, 2024 17:09
@d-v-bd-v-b changed the title [WIP] Remove old v3Remove old v3Apr 10, 2024
@d-v-bd-v-b removed the in progress Someone is currently working on this label Apr 10, 2024
@d-v-bd-v-b mentioned this pull request Apr 11, 2024
6 tasks
@d-v-bd-v-b added the V3 label Apr 12, 2024
@d-v-b
d-v-b requested a review from rabernatApril 12, 2024 11:47
@d-v-bd-v-b mentioned this pull request Apr 16, 2024

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I did not review every single line here but this seems safe to move forward. Much of the remaining legacy code is likely to be retired as well but this certainly helps clean things up in the meantime.

@jhammanjhamman added this to the 3.0.0.alpha milestone Apr 22, 2024

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Let's get this merged 👍

@d-v-b
d-v-b merged commit 368b170 into zarr-developers:v3Apr 22, 2024
@d-v-b
d-v-b deleted the remove_old_v3 branch April 22, 2024 12:39
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@d-v-b@jhamman@normanrz@DahnJ@maxrjones@Saransh-cpp@aldenks
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Remove or un-stick sticky/fixed headers that block content\n(function() {\n function unstick() {\n document.querySelectorAll('header, nav, [role=\"banner\"], .header, .navbar, .sticky, .fixed-top, [style*=\"position: fixed\"], [style*=\"position:sticky\"]').forEach(function(el) {\n if (el.style.position === 'fixed' || el.style.position === 'sticky' || \n getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {\n el.style.position = 'static';\n el.style.top = 'auto';\n el.style.zIndex = 'auto';\n }\n });\n }\n \n unstick();\n \n var observer = new MutationObserver(unstick);\n observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });\n})();", "Kill Sticky Headers"); } } catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

Remove old v3 - #1742

Merged
d-v-b merged 12 commits into
zarr-developers:v3from
d-v-b:remove_old_v3
Apr 22, 2024
Merged

Remove old v3#1742
d-v-b merged 12 commits into
zarr-developers:v3from
d-v-b:remove_old_v3

Conversation

@d-v-b

@d-v-bd-v-b commented Apr 4, 2024

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The plan here is to remove the old implementation of Zarr v3 (the old version 3). I think fully removing the old v3 stuff would be a minor accelerator for the new V3 effort because it removes the possibility of confusing the old v3 with the new v3 in the codebase, and it reduces the LOC of the codebase which makes the old code easier to read / test.

At the moment, I have just slathered deprecation warnings atop the old V3 routines, which lets my IDE (vscode) visually indicate which stuff is using those old routines. If we feel OK about this effort, I would go ahead and prune the old v3 classes entirely, and remove the WIP tag from this PR.

closes#1771

@d-v-bd-v-b added the in progress Someone is currently working on this label Apr 4, 2024
@jhamman

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@d-v-b - do you think this code will ever be released? Since your target is the v3 branch, I think its reasonable to just remove these sections now.

DahnJand others added 7 commits April 10, 2024 17:29
* refactor(v3): Using appropriate types
* fix(v3): Typing fixes + minor code fixes
* fix(v3): _sync_iter works with coroutines
* docs(v3/store/core.py): clearer comment
* fix(metadata.py): Use Any outside TYPE_CHECKING for Pydantic
* fix(zarr/v3): correct zarr format + remove unused method
* fix(v3/store/core.py): Potential suggestion on handling str store_like
* refactor(zarr/v3): Add more typing
* ci(.pre-commit-config.yaml): zarr v3 mypy checks turned on in pre-commit
…elopers#1728)
* Specify v3 hatch envs using GitHub actions matrix
* Update .github/workflows/test-v3.yml
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
* Update .github/workflows/test-v3.yml
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
* test on 3.12 too
* no 3.12
---------
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
Co-authored-by: Joe Hamman <joe@earthmover.io>
* black -> ruff + cleanup
* format
* Preserve git blame
* pre-commit fix
…ntributing.rst (zarr-developers#1643)
Co-authored-by: Joe Hamman <joe@earthmover.io>
@d-v-b

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ContributorAuthor

This is ready for review.

To summarize the changes, because it's a lot of LOC:

  • Removed .zarr_version attributes from Group and Array classes, and the constructors for those classes, and the functions that wrapped the constructors for those classes. As of this PR, Array and Group are V2-only.
  • Removed all legacy V3 code + tests, and anything that was conditional on the zarr version (there was a lot of this in various places in the codebase)
  • Modified relevant tests to no longer parametrize over zarr versions, (and longer reference zarr version at all)
  • V2 Stores still have an _version attribute, which is the literal 2. We can get rid of that now or later if we want.

@d-v-b
d-v-b requested a review from jhammanApril 10, 2024 17:09
@d-v-bd-v-b changed the title [WIP] Remove old v3Remove old v3Apr 10, 2024
@d-v-bd-v-b removed the in progress Someone is currently working on this label Apr 10, 2024
@d-v-bd-v-b mentioned this pull request Apr 11, 2024
6 tasks
@d-v-bd-v-b added the V3 label Apr 12, 2024
@d-v-b
d-v-b requested a review from rabernatApril 12, 2024 11:47
@d-v-bd-v-b mentioned this pull request Apr 16, 2024

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I did not review every single line here but this seems safe to move forward. Much of the remaining legacy code is likely to be retired as well but this certainly helps clean things up in the meantime.

@jhammanjhamman added this to the 3.0.0.alpha milestone Apr 22, 2024

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Let's get this merged 👍

@d-v-b
d-v-b merged commit 368b170 into zarr-developers:v3Apr 22, 2024
@d-v-b
d-v-b deleted the remove_old_v3 branch April 22, 2024 12:39
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7 participants

@d-v-b@jhamman@normanrz@DahnJ@maxrjones@Saransh-cpp@aldenks
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Universal Dark Mode - works on any site\n(function() {\n var enabled = true;\n \n function applyDarkMode() {\n if (!enabled) return;\n \n // Create style element if it doesn't exist\n var style = document.getElementById('universal-dark-mode-style');\n if (!style) {\n style = document.createElement('style');\n style.id = 'universal-dark-mode-style';\n document.head.appendChild(style);\n }\n \n // Dark mode CSS - inverts colors but preserves images/video\n style.textContent = '\n /* Invert everything except media */\n html {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #1a1a2e !important;\n }\n \n /* Restore images, videos, iframes, canvas */\n img, video, iframe, canvas, svg, picture, [style*=\"background-image\"] {\n filter: invert(1) hue-rotate(180deg) !important;\n }\n \n /* Preserve specific elements that should not be inverted */\n .no-dark-mode, .no-dark-mode *,\n [data-theme=\"light\"], [data-theme=\"light\"],\n .ace_editor, .ace_editor *,\n .CodeMirror, .CodeMirror *,\n .monaco-editor, .monaco-editor *,\n .markdown-body pre, .markdown-body pre *,\n .highlight, .highlight *,\n pre code, pre code * {\n filter: none !important;\n }\n \n /* Fix common UI elements */\n .modal, .popup, .dropdown-menu, .tooltip, .popover {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #2d2d44 !important;\n border-color: #444 !important;\n }\n \n /* Scrollbars */\n ::-webkit-scrollbar { background: #1a1a2e !important; }\n ::-webkit-scrollbar-thumb { background: #444 !important; }\n ::-webkit-scrollbar-thumb:hover { background: #555 !important; }\n \n /* Selection */\n ::selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ';\n }\n \n function removeDarkMode() {\n var style = document.getElementById('universal-dark-mode-style');\n if (style) style.remove();\n }\n \n // Toggle with Alt+Shift+D\n document.addEventListener('keydown', function(e) {\n if (e.altKey && e.shiftKey && e.key === 'D') {\n e.preventDefault();\n enabled = !enabled;\n if (enabled) {\n applyDarkMode();\n console.log('[Universal Dark Mode] Enabled');\n } else {\n removeDarkMode();\n console.log('[Universal Dark Mode] Disabled');\n }\n }\n });\n \n // Apply on load\n applyDarkMode();\n \n // Re-apply on dynamic content\n var observer = new MutationObserver(function(mutations) {\n if (enabled && !document.getElementById('universal-dark-mode-style')) {\n applyDarkMode();\n }\n });\n observer.observe(document.head, { childList: true });\n \n console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');\n})();", "Universal Dark Mode"); } } catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); } })(); })();
Skip to content

Remove old v3 - #1742

Merged
d-v-b merged 12 commits into
zarr-developers:v3from
d-v-b:remove_old_v3
Apr 22, 2024
Merged

Remove old v3#1742
d-v-b merged 12 commits into
zarr-developers:v3from
d-v-b:remove_old_v3

Conversation

@d-v-b

@d-v-bd-v-b commented Apr 4, 2024

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The plan here is to remove the old implementation of Zarr v3 (the old version 3). I think fully removing the old v3 stuff would be a minor accelerator for the new V3 effort because it removes the possibility of confusing the old v3 with the new v3 in the codebase, and it reduces the LOC of the codebase which makes the old code easier to read / test.

At the moment, I have just slathered deprecation warnings atop the old V3 routines, which lets my IDE (vscode) visually indicate which stuff is using those old routines. If we feel OK about this effort, I would go ahead and prune the old v3 classes entirely, and remove the WIP tag from this PR.

closes#1771

@d-v-bd-v-b added the in progress Someone is currently working on this label Apr 4, 2024
@jhamman

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@d-v-b - do you think this code will ever be released? Since your target is the v3 branch, I think its reasonable to just remove these sections now.

DahnJand others added 7 commits April 10, 2024 17:29
* refactor(v3): Using appropriate types
* fix(v3): Typing fixes + minor code fixes
* fix(v3): _sync_iter works with coroutines
* docs(v3/store/core.py): clearer comment
* fix(metadata.py): Use Any outside TYPE_CHECKING for Pydantic
* fix(zarr/v3): correct zarr format + remove unused method
* fix(v3/store/core.py): Potential suggestion on handling str store_like
* refactor(zarr/v3): Add more typing
* ci(.pre-commit-config.yaml): zarr v3 mypy checks turned on in pre-commit
…elopers#1728)
* Specify v3 hatch envs using GitHub actions matrix
* Update .github/workflows/test-v3.yml
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
* Update .github/workflows/test-v3.yml
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
* test on 3.12 too
* no 3.12
---------
Co-authored-by: Joe Hamman <jhamman1@gmail.com>
Co-authored-by: Joe Hamman <joe@earthmover.io>
* black -> ruff + cleanup
* format
* Preserve git blame
* pre-commit fix
…ntributing.rst (zarr-developers#1643)
Co-authored-by: Joe Hamman <joe@earthmover.io>
@d-v-b

Copy link
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ContributorAuthor

This is ready for review.

To summarize the changes, because it's a lot of LOC:

  • Removed .zarr_version attributes from Group and Array classes, and the constructors for those classes, and the functions that wrapped the constructors for those classes. As of this PR, Array and Group are V2-only.
  • Removed all legacy V3 code + tests, and anything that was conditional on the zarr version (there was a lot of this in various places in the codebase)
  • Modified relevant tests to no longer parametrize over zarr versions, (and longer reference zarr version at all)
  • V2 Stores still have an _version attribute, which is the literal 2. We can get rid of that now or later if we want.

@d-v-b
d-v-b requested a review from jhammanApril 10, 2024 17:09
@d-v-bd-v-b changed the title [WIP] Remove old v3Remove old v3Apr 10, 2024
@d-v-bd-v-b removed the in progress Someone is currently working on this label Apr 10, 2024
@d-v-bd-v-b mentioned this pull request Apr 11, 2024
6 tasks
@d-v-bd-v-b added the V3 label Apr 12, 2024
@d-v-b
d-v-b requested a review from rabernatApril 12, 2024 11:47
@d-v-bd-v-b mentioned this pull request Apr 16, 2024

@jhammanjhamman left a comment

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I did not review every single line here but this seems safe to move forward. Much of the remaining legacy code is likely to be retired as well but this certainly helps clean things up in the meantime.

@jhammanjhamman added this to the 3.0.0.alpha milestone Apr 22, 2024

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Let's get this merged 👍

@d-v-b
d-v-b merged commit 368b170 into zarr-developers:v3Apr 22, 2024
@d-v-b
d-v-b deleted the remove_old_v3 branch April 22, 2024 12:39
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@d-v-b@jhamman@normanrz@DahnJ@maxrjones@Saransh-cpp@aldenks