fix(async): set default concurrency to 10 tasks - #2256

Merged
jhamman merged 3 commits into
zarr-developers:v3from
jhamman:fix/default-concurrency
Sep 26, 2024
Merged

fix(async): set default concurrency to 10 tasks#2256
jhamman merged 3 commits into
zarr-developers:v3from
jhamman:fix/default-concurrency

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@jhamman

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Unbounded concurrency is not a good idea. This sets the default to 10.

TODO:

  • Add unit tests and/or doctests in docstrings
  • Add docstrings and API docs for any new/modified user-facing classes and functions
  • New/modified features documented in docs/tutorial.rst
  • Changes documented in docs/release.rst
  • GitHub Actions have all passed
  • Test coverage is 100% (Codecov passes)

@dcherian

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I don't have an opinion but this is what the threading module does

Default value of max_workers is changed to min(32, os.cpu_count() + 4). This default value preserves at least 5 workers for I/O bound tasks. It utilizes at most 32 CPU cores for CPU bound tasks which release the GIL. And it avoids using very large resources implicitly on many-core machines.

@jhamman

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There are really two issues here.

  1. how many threads we try to use at once, and
  2. how many concurrent IO operations we attempt

Right now, we are using a single config for both of these but in the future, we may consider allowing users to configure the size of the thread pool and/or multi-threading behavior separately.

@jhamman
jhammanforce-pushed the fix/default-concurrency branch from 4ed330c to 5e2075bCompareSeptember 25, 2024 22:13
@jhamman
jhammanforce-pushed the fix/default-concurrency branch from 5e2075b to 818fc73CompareSeptember 25, 2024 22:15
@dcherian

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But perhaps the default should scale with cpu_count like what threading does: min(32, os.cpu_count() + 4). If we are making arbitrary choices, perhaps we just go with what the standard library does.

@jhamman

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But perhaps the default should scale with cpu_count like what threading does: min(32, os.cpu_count() + 4). If we are making arbitrary choices, perhaps we just go with what the standard library does.

I hear what you are saying. But this applies to both IO and tasks that use to_thread. I would like us to revisit the way we distribute work to IO and threaded tasks another day.

@jhammanjhamman added this to the 3.0.0 milestone Sep 26, 2024
@jhamman
jhamman merged commit 4515671 into zarr-developers:v3Sep 26, 2024
dcherian added a commit to dcherian/zarr-python that referenced this pull request Sep 27, 2024
* v3: (21 commits)
Default zarr.open to open_group if shape is not provided (zarr-developers#2158)
feat: metadata-only support for storage transformers metadata (zarr-developers#2180)
fix(async): set default concurrency to 10 tasks (zarr-developers#2256)
chore(deps): drop support for python 3.10 and numpy 1.24 (zarr-developers#2217)
feature(store): add LoggingStore wrapper (zarr-developers#2231)
Apply assorted ruff/flake8-simplify rules (SIM) (zarr-developers#2259)
Add array storage helpers (zarr-developers#2065)
Apply ruff/flake8-annotations rule ANN204 (zarr-developers#2258)
No need to run DeepSource any more - we use ruff (zarr-developers#2261)
Remove unnecessary lambda expression (zarr-developers#2260)
Enforce ruff/flake8-comprehensions rules (C4) (zarr-developers#2239)
Use `map(str, *)` in `test_accessed_chunks` (zarr-developers#2229)
Replace Gitter with Zulip (zarr-developers#2254)
Enforce ruff/flake8-pytest-style rules (PT) (zarr-developers#2236)
Fix multiple identical imports (zarr-developers#2241)
Enforce ruff/flake8-return rules (RET) (zarr-developers#2237)
Enforce ruff/flynt rules (FLY) (zarr-developers#2240)
Fix fill_value handling for complex dtypes (zarr-developers#2200)
Update V2 codec pipeline to use concrete classes (zarr-developers#2244)
Apply and enforce more ruff rules (zarr-developers#2053)
...
@jhammanjhamman added the V3 label Oct 11, 2024
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@jhamman@dcherian
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Add copy buttons to all
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})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '
Skip to content

fix(async): set default concurrency to 10 tasks - #2256

Merged
jhamman merged 3 commits into
zarr-developers:v3from
jhamman:fix/default-concurrency
Sep 26, 2024
Merged

fix(async): set default concurrency to 10 tasks#2256
jhamman merged 3 commits into
zarr-developers:v3from
jhamman:fix/default-concurrency

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@jhamman

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Unbounded concurrency is not a good idea. This sets the default to 10.

TODO:

  • Add unit tests and/or doctests in docstrings
  • Add docstrings and API docs for any new/modified user-facing classes and functions
  • New/modified features documented in docs/tutorial.rst
  • Changes documented in docs/release.rst
  • GitHub Actions have all passed
  • Test coverage is 100% (Codecov passes)

@dcherian

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I don't have an opinion but this is what the threading module does

Default value of max_workers is changed to min(32, os.cpu_count() + 4). This default value preserves at least 5 workers for I/O bound tasks. It utilizes at most 32 CPU cores for CPU bound tasks which release the GIL. And it avoids using very large resources implicitly on many-core machines.

@jhamman

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There are really two issues here.

  1. how many threads we try to use at once, and
  2. how many concurrent IO operations we attempt

Right now, we are using a single config for both of these but in the future, we may consider allowing users to configure the size of the thread pool and/or multi-threading behavior separately.

@jhamman
jhammanforce-pushed the fix/default-concurrency branch from 4ed330c to 5e2075bCompareSeptember 25, 2024 22:13
@jhamman
jhammanforce-pushed the fix/default-concurrency branch from 5e2075b to 818fc73CompareSeptember 25, 2024 22:15
@dcherian

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But perhaps the default should scale with cpu_count like what threading does: min(32, os.cpu_count() + 4). If we are making arbitrary choices, perhaps we just go with what the standard library does.

@jhamman

Copy link
Copy Markdown
MemberAuthor

But perhaps the default should scale with cpu_count like what threading does: min(32, os.cpu_count() + 4). If we are making arbitrary choices, perhaps we just go with what the standard library does.

I hear what you are saying. But this applies to both IO and tasks that use to_thread. I would like us to revisit the way we distribute work to IO and threaded tasks another day.

@jhammanjhamman added this to the 3.0.0 milestone Sep 26, 2024
@jhamman
jhamman merged commit 4515671 into zarr-developers:v3Sep 26, 2024
dcherian added a commit to dcherian/zarr-python that referenced this pull request Sep 27, 2024
* v3: (21 commits)
Default zarr.open to open_group if shape is not provided (zarr-developers#2158)
feat: metadata-only support for storage transformers metadata (zarr-developers#2180)
fix(async): set default concurrency to 10 tasks (zarr-developers#2256)
chore(deps): drop support for python 3.10 and numpy 1.24 (zarr-developers#2217)
feature(store): add LoggingStore wrapper (zarr-developers#2231)
Apply assorted ruff/flake8-simplify rules (SIM) (zarr-developers#2259)
Add array storage helpers (zarr-developers#2065)
Apply ruff/flake8-annotations rule ANN204 (zarr-developers#2258)
No need to run DeepSource any more - we use ruff (zarr-developers#2261)
Remove unnecessary lambda expression (zarr-developers#2260)
Enforce ruff/flake8-comprehensions rules (C4) (zarr-developers#2239)
Use `map(str, *)` in `test_accessed_chunks` (zarr-developers#2229)
Replace Gitter with Zulip (zarr-developers#2254)
Enforce ruff/flake8-pytest-style rules (PT) (zarr-developers#2236)
Fix multiple identical imports (zarr-developers#2241)
Enforce ruff/flake8-return rules (RET) (zarr-developers#2237)
Enforce ruff/flynt rules (FLY) (zarr-developers#2240)
Fix fill_value handling for complex dtypes (zarr-developers#2200)
Update V2 codec pipeline to use concrete classes (zarr-developers#2244)
Apply and enforce more ruff rules (zarr-developers#2053)
...
@jhammanjhamman added the V3 label Oct 11, 2024
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Successfully merging this pull request may close these issues.

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@jhamman@dcherian
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Force GitHub README to respect dark mode\n(function() {\n var style = document.createElement('style');\n style.textContent = '\n .markdown-body {\n color-scheme: dark light;\n }\n .markdown-body pre { background: #161b22 !important; }\n .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }\n .markdown-body table th, .markdown-body table td { border-color: #30363d !important; }\n .markdown-body img { background: #0d1117; }\n .markdown-body blockquote { border-left-color: #8b949e; }\n .markdown-body hr { border-color: #30363d; }\n ';\n document.head.appendChild(style);\n})();", "GitHub Dark Mode README Fix"); } } catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

fix(async): set default concurrency to 10 tasks - #2256

Merged
jhamman merged 3 commits into
zarr-developers:v3from
jhamman:fix/default-concurrency
Sep 26, 2024
Merged

fix(async): set default concurrency to 10 tasks#2256
jhamman merged 3 commits into
zarr-developers:v3from
jhamman:fix/default-concurrency

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@jhamman

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Unbounded concurrency is not a good idea. This sets the default to 10.

TODO:

  • Add unit tests and/or doctests in docstrings
  • Add docstrings and API docs for any new/modified user-facing classes and functions
  • New/modified features documented in docs/tutorial.rst
  • Changes documented in docs/release.rst
  • GitHub Actions have all passed
  • Test coverage is 100% (Codecov passes)

@dcherian

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I don't have an opinion but this is what the threading module does

Default value of max_workers is changed to min(32, os.cpu_count() + 4). This default value preserves at least 5 workers for I/O bound tasks. It utilizes at most 32 CPU cores for CPU bound tasks which release the GIL. And it avoids using very large resources implicitly on many-core machines.

@jhamman

Copy link
Copy Markdown
MemberAuthor

There are really two issues here.

  1. how many threads we try to use at once, and
  2. how many concurrent IO operations we attempt

Right now, we are using a single config for both of these but in the future, we may consider allowing users to configure the size of the thread pool and/or multi-threading behavior separately.

@jhamman
jhammanforce-pushed the fix/default-concurrency branch from 4ed330c to 5e2075bCompareSeptember 25, 2024 22:13
@jhamman
jhammanforce-pushed the fix/default-concurrency branch from 5e2075b to 818fc73CompareSeptember 25, 2024 22:15
@dcherian

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But perhaps the default should scale with cpu_count like what threading does: min(32, os.cpu_count() + 4). If we are making arbitrary choices, perhaps we just go with what the standard library does.

@jhamman

Copy link
Copy Markdown
MemberAuthor

But perhaps the default should scale with cpu_count like what threading does: min(32, os.cpu_count() + 4). If we are making arbitrary choices, perhaps we just go with what the standard library does.

I hear what you are saying. But this applies to both IO and tasks that use to_thread. I would like us to revisit the way we distribute work to IO and threaded tasks another day.

@jhammanjhamman added this to the 3.0.0 milestone Sep 26, 2024
@jhamman
jhamman merged commit 4515671 into zarr-developers:v3Sep 26, 2024
dcherian added a commit to dcherian/zarr-python that referenced this pull request Sep 27, 2024
* v3: (21 commits)
Default zarr.open to open_group if shape is not provided (zarr-developers#2158)
feat: metadata-only support for storage transformers metadata (zarr-developers#2180)
fix(async): set default concurrency to 10 tasks (zarr-developers#2256)
chore(deps): drop support for python 3.10 and numpy 1.24 (zarr-developers#2217)
feature(store): add LoggingStore wrapper (zarr-developers#2231)
Apply assorted ruff/flake8-simplify rules (SIM) (zarr-developers#2259)
Add array storage helpers (zarr-developers#2065)
Apply ruff/flake8-annotations rule ANN204 (zarr-developers#2258)
No need to run DeepSource any more - we use ruff (zarr-developers#2261)
Remove unnecessary lambda expression (zarr-developers#2260)
Enforce ruff/flake8-comprehensions rules (C4) (zarr-developers#2239)
Use `map(str, *)` in `test_accessed_chunks` (zarr-developers#2229)
Replace Gitter with Zulip (zarr-developers#2254)
Enforce ruff/flake8-pytest-style rules (PT) (zarr-developers#2236)
Fix multiple identical imports (zarr-developers#2241)
Enforce ruff/flake8-return rules (RET) (zarr-developers#2237)
Enforce ruff/flynt rules (FLY) (zarr-developers#2240)
Fix fill_value handling for complex dtypes (zarr-developers#2200)
Update V2 codec pipeline to use concrete classes (zarr-developers#2244)
Apply and enforce more ruff rules (zarr-developers#2053)
...
@jhammanjhamman added the V3 label Oct 11, 2024
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@jhamman@dcherian
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Highlight search terms from Google/DuckDuckGo/Bing referrer\n(function() {\n var ref = document.referrer;\n var terms = [];\n \n if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {\n var url = new URL(ref);\n var q = url.searchParams.get('q') || url.searchParams.get('p');\n if (q) {\n terms = q.split(/\\s+/).filter(function(t) { return t.length > 2; });\n }\n }\n \n if (terms.length === 0) return;\n \n var style = document.createElement('style');\n style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';\n document.head.appendChild(style);\n \n function highlight(node) {\n if (node.nodeType === 3) { // text node\n var text = node.textContent;\n var found = false;\n terms.forEach(function(term) {\n var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\\]\\\\]/g, '\\\\') + ')', 'gi');\n if (regex.test(text)) {\n found = true;\n var frag = document.createDocumentFragment();\n var parts = text.split(regex);\n parts.forEach(function(part, i) {\n if (i % 2 === 0) {\n frag.appendChild(document.createTextNode(part));\n } else {\n var span = document.createElement('span');\n span.className = 'userscript-highlight';\n span.textContent = part;\n frag.appendChild(span);\n }\n });\n node.parentNode.replaceChild(frag, node);\n }\n });\n } else if (node.nodeType === 1 && node.childNodes) { // element\n var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];\n if (!skipTags.includes(node.tagName)) {\n Array.from(node.childNodes).forEach(highlight);\n }\n }\n }\n \n highlight(document.body);\n \n // Re-highlight on dynamic content\n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1 || node.nodeType === 3) highlight(node);\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Highlight Search Terms"); } } catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

fix(async): set default concurrency to 10 tasks - #2256

Merged
jhamman merged 3 commits into
zarr-developers:v3from
jhamman:fix/default-concurrency
Sep 26, 2024
Merged

fix(async): set default concurrency to 10 tasks#2256
jhamman merged 3 commits into
zarr-developers:v3from
jhamman:fix/default-concurrency

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@jhamman

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Unbounded concurrency is not a good idea. This sets the default to 10.

TODO:

  • Add unit tests and/or doctests in docstrings
  • Add docstrings and API docs for any new/modified user-facing classes and functions
  • New/modified features documented in docs/tutorial.rst
  • Changes documented in docs/release.rst
  • GitHub Actions have all passed
  • Test coverage is 100% (Codecov passes)

@dcherian

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I don't have an opinion but this is what the threading module does

Default value of max_workers is changed to min(32, os.cpu_count() + 4). This default value preserves at least 5 workers for I/O bound tasks. It utilizes at most 32 CPU cores for CPU bound tasks which release the GIL. And it avoids using very large resources implicitly on many-core machines.

@jhamman

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There are really two issues here.

  1. how many threads we try to use at once, and
  2. how many concurrent IO operations we attempt

Right now, we are using a single config for both of these but in the future, we may consider allowing users to configure the size of the thread pool and/or multi-threading behavior separately.

@jhamman
jhammanforce-pushed the fix/default-concurrency branch from 4ed330c to 5e2075bCompareSeptember 25, 2024 22:13
@jhamman
jhammanforce-pushed the fix/default-concurrency branch from 5e2075b to 818fc73CompareSeptember 25, 2024 22:15
@dcherian

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But perhaps the default should scale with cpu_count like what threading does: min(32, os.cpu_count() + 4). If we are making arbitrary choices, perhaps we just go with what the standard library does.

@jhamman

Copy link
Copy Markdown
MemberAuthor

But perhaps the default should scale with cpu_count like what threading does: min(32, os.cpu_count() + 4). If we are making arbitrary choices, perhaps we just go with what the standard library does.

I hear what you are saying. But this applies to both IO and tasks that use to_thread. I would like us to revisit the way we distribute work to IO and threaded tasks another day.

@jhammanjhamman added this to the 3.0.0 milestone Sep 26, 2024
@jhamman
jhamman merged commit 4515671 into zarr-developers:v3Sep 26, 2024
dcherian added a commit to dcherian/zarr-python that referenced this pull request Sep 27, 2024
* v3: (21 commits)
Default zarr.open to open_group if shape is not provided (zarr-developers#2158)
feat: metadata-only support for storage transformers metadata (zarr-developers#2180)
fix(async): set default concurrency to 10 tasks (zarr-developers#2256)
chore(deps): drop support for python 3.10 and numpy 1.24 (zarr-developers#2217)
feature(store): add LoggingStore wrapper (zarr-developers#2231)
Apply assorted ruff/flake8-simplify rules (SIM) (zarr-developers#2259)
Add array storage helpers (zarr-developers#2065)
Apply ruff/flake8-annotations rule ANN204 (zarr-developers#2258)
No need to run DeepSource any more - we use ruff (zarr-developers#2261)
Remove unnecessary lambda expression (zarr-developers#2260)
Enforce ruff/flake8-comprehensions rules (C4) (zarr-developers#2239)
Use `map(str, *)` in `test_accessed_chunks` (zarr-developers#2229)
Replace Gitter with Zulip (zarr-developers#2254)
Enforce ruff/flake8-pytest-style rules (PT) (zarr-developers#2236)
Fix multiple identical imports (zarr-developers#2241)
Enforce ruff/flake8-return rules (RET) (zarr-developers#2237)
Enforce ruff/flynt rules (FLY) (zarr-developers#2240)
Fix fill_value handling for complex dtypes (zarr-developers#2200)
Update V2 codec pipeline to use concrete classes (zarr-developers#2244)
Apply and enforce more ruff rules (zarr-developers#2053)
...
@jhammanjhamman added the V3 label Oct 11, 2024
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Successfully merging this pull request may close these issues.

2 participants

@jhamman@dcherian
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Strip utm_, fbclid, gclid, etc. from all links on page\n(function() {\n var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',\n 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',\n 'ref', 'ref_src', 'source', 'medium', 'campaign'];\n \n function cleanUrl(url) {\n try {\n var u = new URL(url, window.location.origin);\n var changed = false;\n trackingParams.forEach(function(p) {\n if (u.searchParams.has(p)) {\n u.searchParams.delete(p);\n changed = true;\n }\n });\n return changed ? u.toString() : url;\n } catch (e) {\n return url;\n }\n }\n \n function cleanLinks() {\n document.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n \n cleanLinks();\n \n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1) {\n if (node.tagName === 'A') cleanLinks();\n node.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Remove Tracking Parameters from Links"); } } catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); } })(); (function(){ try { var __m = "youtube.com"; var __re = new RegExp('^' + "youtube\\.com" + '
Skip to content

fix(async): set default concurrency to 10 tasks - #2256

Merged
jhamman merged 3 commits into
zarr-developers:v3from
jhamman:fix/default-concurrency
Sep 26, 2024
Merged

fix(async): set default concurrency to 10 tasks#2256
jhamman merged 3 commits into
zarr-developers:v3from
jhamman:fix/default-concurrency

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@jhamman

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Unbounded concurrency is not a good idea. This sets the default to 10.

TODO:

  • Add unit tests and/or doctests in docstrings
  • Add docstrings and API docs for any new/modified user-facing classes and functions
  • New/modified features documented in docs/tutorial.rst
  • Changes documented in docs/release.rst
  • GitHub Actions have all passed
  • Test coverage is 100% (Codecov passes)

@dcherian

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I don't have an opinion but this is what the threading module does

Default value of max_workers is changed to min(32, os.cpu_count() + 4). This default value preserves at least 5 workers for I/O bound tasks. It utilizes at most 32 CPU cores for CPU bound tasks which release the GIL. And it avoids using very large resources implicitly on many-core machines.

@jhamman

Copy link
Copy Markdown
MemberAuthor

There are really two issues here.

  1. how many threads we try to use at once, and
  2. how many concurrent IO operations we attempt

Right now, we are using a single config for both of these but in the future, we may consider allowing users to configure the size of the thread pool and/or multi-threading behavior separately.

@jhamman
jhammanforce-pushed the fix/default-concurrency branch from 4ed330c to 5e2075bCompareSeptember 25, 2024 22:13
@jhamman
jhammanforce-pushed the fix/default-concurrency branch from 5e2075b to 818fc73CompareSeptember 25, 2024 22:15
@dcherian

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But perhaps the default should scale with cpu_count like what threading does: min(32, os.cpu_count() + 4). If we are making arbitrary choices, perhaps we just go with what the standard library does.

@jhamman

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But perhaps the default should scale with cpu_count like what threading does: min(32, os.cpu_count() + 4). If we are making arbitrary choices, perhaps we just go with what the standard library does.

I hear what you are saying. But this applies to both IO and tasks that use to_thread. I would like us to revisit the way we distribute work to IO and threaded tasks another day.

@jhammanjhamman added this to the 3.0.0 milestone Sep 26, 2024
@jhamman
jhamman merged commit 4515671 into zarr-developers:v3Sep 26, 2024
dcherian added a commit to dcherian/zarr-python that referenced this pull request Sep 27, 2024
* v3: (21 commits)
Default zarr.open to open_group if shape is not provided (zarr-developers#2158)
feat: metadata-only support for storage transformers metadata (zarr-developers#2180)
fix(async): set default concurrency to 10 tasks (zarr-developers#2256)
chore(deps): drop support for python 3.10 and numpy 1.24 (zarr-developers#2217)
feature(store): add LoggingStore wrapper (zarr-developers#2231)
Apply assorted ruff/flake8-simplify rules (SIM) (zarr-developers#2259)
Add array storage helpers (zarr-developers#2065)
Apply ruff/flake8-annotations rule ANN204 (zarr-developers#2258)
No need to run DeepSource any more - we use ruff (zarr-developers#2261)
Remove unnecessary lambda expression (zarr-developers#2260)
Enforce ruff/flake8-comprehensions rules (C4) (zarr-developers#2239)
Use `map(str, *)` in `test_accessed_chunks` (zarr-developers#2229)
Replace Gitter with Zulip (zarr-developers#2254)
Enforce ruff/flake8-pytest-style rules (PT) (zarr-developers#2236)
Fix multiple identical imports (zarr-developers#2241)
Enforce ruff/flake8-return rules (RET) (zarr-developers#2237)
Enforce ruff/flynt rules (FLY) (zarr-developers#2240)
Fix fill_value handling for complex dtypes (zarr-developers#2200)
Update V2 codec pipeline to use concrete classes (zarr-developers#2244)
Apply and enforce more ruff rules (zarr-developers#2053)
...
@jhammanjhamman added the V3 label Oct 11, 2024
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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Auto-enable theater mode on YouTube\n(function() {\n function tryTheater() {\n var btn = document.querySelector('button[aria-label=\"Theater mode\"], ytd-player #player button[title=\"Theater mode\"]');\n if (btn && !btn.classList.contains('activated')) {\n btn.click();\n }\n }\n \n // Try immediately\n tryTheater();\n \n // Try after navigation (SPA)\n var lastUrl = location.href;\n setInterval(function() {\n if (location.href !== lastUrl) {\n lastUrl = location.href;\n setTimeout(tryTheater, 500);\n }\n }, 1000);\n \n // Also try on player load\n var observer = new MutationObserver(tryTheater);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "YouTube Theater Mode Default"); } } catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

fix(async): set default concurrency to 10 tasks - #2256

Merged
jhamman merged 3 commits into
zarr-developers:v3from
jhamman:fix/default-concurrency
Sep 26, 2024
Merged

fix(async): set default concurrency to 10 tasks#2256
jhamman merged 3 commits into
zarr-developers:v3from
jhamman:fix/default-concurrency

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@jhamman

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Unbounded concurrency is not a good idea. This sets the default to 10.

TODO:

  • Add unit tests and/or doctests in docstrings
  • Add docstrings and API docs for any new/modified user-facing classes and functions
  • New/modified features documented in docs/tutorial.rst
  • Changes documented in docs/release.rst
  • GitHub Actions have all passed
  • Test coverage is 100% (Codecov passes)

@dcherian

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I don't have an opinion but this is what the threading module does

Default value of max_workers is changed to min(32, os.cpu_count() + 4). This default value preserves at least 5 workers for I/O bound tasks. It utilizes at most 32 CPU cores for CPU bound tasks which release the GIL. And it avoids using very large resources implicitly on many-core machines.

@jhamman

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There are really two issues here.

  1. how many threads we try to use at once, and
  2. how many concurrent IO operations we attempt

Right now, we are using a single config for both of these but in the future, we may consider allowing users to configure the size of the thread pool and/or multi-threading behavior separately.

@jhamman
jhammanforce-pushed the fix/default-concurrency branch from 4ed330c to 5e2075bCompareSeptember 25, 2024 22:13
@jhamman
jhammanforce-pushed the fix/default-concurrency branch from 5e2075b to 818fc73CompareSeptember 25, 2024 22:15
@dcherian

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But perhaps the default should scale with cpu_count like what threading does: min(32, os.cpu_count() + 4). If we are making arbitrary choices, perhaps we just go with what the standard library does.

@jhamman

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But perhaps the default should scale with cpu_count like what threading does: min(32, os.cpu_count() + 4). If we are making arbitrary choices, perhaps we just go with what the standard library does.

I hear what you are saying. But this applies to both IO and tasks that use to_thread. I would like us to revisit the way we distribute work to IO and threaded tasks another day.

@jhammanjhamman added this to the 3.0.0 milestone Sep 26, 2024
@jhamman
jhamman merged commit 4515671 into zarr-developers:v3Sep 26, 2024
dcherian added a commit to dcherian/zarr-python that referenced this pull request Sep 27, 2024
* v3: (21 commits)
Default zarr.open to open_group if shape is not provided (zarr-developers#2158)
feat: metadata-only support for storage transformers metadata (zarr-developers#2180)
fix(async): set default concurrency to 10 tasks (zarr-developers#2256)
chore(deps): drop support for python 3.10 and numpy 1.24 (zarr-developers#2217)
feature(store): add LoggingStore wrapper (zarr-developers#2231)
Apply assorted ruff/flake8-simplify rules (SIM) (zarr-developers#2259)
Add array storage helpers (zarr-developers#2065)
Apply ruff/flake8-annotations rule ANN204 (zarr-developers#2258)
No need to run DeepSource any more - we use ruff (zarr-developers#2261)
Remove unnecessary lambda expression (zarr-developers#2260)
Enforce ruff/flake8-comprehensions rules (C4) (zarr-developers#2239)
Use `map(str, *)` in `test_accessed_chunks` (zarr-developers#2229)
Replace Gitter with Zulip (zarr-developers#2254)
Enforce ruff/flake8-pytest-style rules (PT) (zarr-developers#2236)
Fix multiple identical imports (zarr-developers#2241)
Enforce ruff/flake8-return rules (RET) (zarr-developers#2237)
Enforce ruff/flynt rules (FLY) (zarr-developers#2240)
Fix fill_value handling for complex dtypes (zarr-developers#2200)
Update V2 codec pipeline to use concrete classes (zarr-developers#2244)
Apply and enforce more ruff rules (zarr-developers#2053)
...
@jhammanjhamman added the V3 label Oct 11, 2024
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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Remove or un-stick sticky/fixed headers that block content\n(function() {\n function unstick() {\n document.querySelectorAll('header, nav, [role=\"banner\"], .header, .navbar, .sticky, .fixed-top, [style*=\"position: fixed\"], [style*=\"position:sticky\"]').forEach(function(el) {\n if (el.style.position === 'fixed' || el.style.position === 'sticky' || \n getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {\n el.style.position = 'static';\n el.style.top = 'auto';\n el.style.zIndex = 'auto';\n }\n });\n }\n \n unstick();\n \n var observer = new MutationObserver(unstick);\n observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });\n})();", "Kill Sticky Headers"); } } catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

fix(async): set default concurrency to 10 tasks - #2256

Merged
jhamman merged 3 commits into
zarr-developers:v3from
jhamman:fix/default-concurrency
Sep 26, 2024
Merged

fix(async): set default concurrency to 10 tasks#2256
jhamman merged 3 commits into
zarr-developers:v3from
jhamman:fix/default-concurrency

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@jhamman

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Unbounded concurrency is not a good idea. This sets the default to 10.

TODO:

  • Add unit tests and/or doctests in docstrings
  • Add docstrings and API docs for any new/modified user-facing classes and functions
  • New/modified features documented in docs/tutorial.rst
  • Changes documented in docs/release.rst
  • GitHub Actions have all passed
  • Test coverage is 100% (Codecov passes)

@dcherian

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I don't have an opinion but this is what the threading module does

Default value of max_workers is changed to min(32, os.cpu_count() + 4). This default value preserves at least 5 workers for I/O bound tasks. It utilizes at most 32 CPU cores for CPU bound tasks which release the GIL. And it avoids using very large resources implicitly on many-core machines.

@jhamman

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MemberAuthor

There are really two issues here.

  1. how many threads we try to use at once, and
  2. how many concurrent IO operations we attempt

Right now, we are using a single config for both of these but in the future, we may consider allowing users to configure the size of the thread pool and/or multi-threading behavior separately.

@jhamman
jhammanforce-pushed the fix/default-concurrency branch from 4ed330c to 5e2075bCompareSeptember 25, 2024 22:13
@jhamman
jhammanforce-pushed the fix/default-concurrency branch from 5e2075b to 818fc73CompareSeptember 25, 2024 22:15
@dcherian

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But perhaps the default should scale with cpu_count like what threading does: min(32, os.cpu_count() + 4). If we are making arbitrary choices, perhaps we just go with what the standard library does.

@jhamman

Copy link
Copy Markdown
MemberAuthor

But perhaps the default should scale with cpu_count like what threading does: min(32, os.cpu_count() + 4). If we are making arbitrary choices, perhaps we just go with what the standard library does.

I hear what you are saying. But this applies to both IO and tasks that use to_thread. I would like us to revisit the way we distribute work to IO and threaded tasks another day.

@jhammanjhamman added this to the 3.0.0 milestone Sep 26, 2024
@jhamman
jhamman merged commit 4515671 into zarr-developers:v3Sep 26, 2024
dcherian added a commit to dcherian/zarr-python that referenced this pull request Sep 27, 2024
* v3: (21 commits)
Default zarr.open to open_group if shape is not provided (zarr-developers#2158)
feat: metadata-only support for storage transformers metadata (zarr-developers#2180)
fix(async): set default concurrency to 10 tasks (zarr-developers#2256)
chore(deps): drop support for python 3.10 and numpy 1.24 (zarr-developers#2217)
feature(store): add LoggingStore wrapper (zarr-developers#2231)
Apply assorted ruff/flake8-simplify rules (SIM) (zarr-developers#2259)
Add array storage helpers (zarr-developers#2065)
Apply ruff/flake8-annotations rule ANN204 (zarr-developers#2258)
No need to run DeepSource any more - we use ruff (zarr-developers#2261)
Remove unnecessary lambda expression (zarr-developers#2260)
Enforce ruff/flake8-comprehensions rules (C4) (zarr-developers#2239)
Use `map(str, *)` in `test_accessed_chunks` (zarr-developers#2229)
Replace Gitter with Zulip (zarr-developers#2254)
Enforce ruff/flake8-pytest-style rules (PT) (zarr-developers#2236)
Fix multiple identical imports (zarr-developers#2241)
Enforce ruff/flake8-return rules (RET) (zarr-developers#2237)
Enforce ruff/flynt rules (FLY) (zarr-developers#2240)
Fix fill_value handling for complex dtypes (zarr-developers#2200)
Update V2 codec pipeline to use concrete classes (zarr-developers#2244)
Apply and enforce more ruff rules (zarr-developers#2053)
...
@jhammanjhamman added the V3 label Oct 11, 2024
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Labels

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Status: Done

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Successfully merging this pull request may close these issues.

2 participants

@jhamman@dcherian
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Universal Dark Mode - works on any site\n(function() {\n var enabled = true;\n \n function applyDarkMode() {\n if (!enabled) return;\n \n // Create style element if it doesn't exist\n var style = document.getElementById('universal-dark-mode-style');\n if (!style) {\n style = document.createElement('style');\n style.id = 'universal-dark-mode-style';\n document.head.appendChild(style);\n }\n \n // Dark mode CSS - inverts colors but preserves images/video\n style.textContent = '\n /* Invert everything except media */\n html {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #1a1a2e !important;\n }\n \n /* Restore images, videos, iframes, canvas */\n img, video, iframe, canvas, svg, picture, [style*=\"background-image\"] {\n filter: invert(1) hue-rotate(180deg) !important;\n }\n \n /* Preserve specific elements that should not be inverted */\n .no-dark-mode, .no-dark-mode *,\n [data-theme=\"light\"], [data-theme=\"light\"],\n .ace_editor, .ace_editor *,\n .CodeMirror, .CodeMirror *,\n .monaco-editor, .monaco-editor *,\n .markdown-body pre, .markdown-body pre *,\n .highlight, .highlight *,\n pre code, pre code * {\n filter: none !important;\n }\n \n /* Fix common UI elements */\n .modal, .popup, .dropdown-menu, .tooltip, .popover {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #2d2d44 !important;\n border-color: #444 !important;\n }\n \n /* Scrollbars */\n ::-webkit-scrollbar { background: #1a1a2e !important; }\n ::-webkit-scrollbar-thumb { background: #444 !important; }\n ::-webkit-scrollbar-thumb:hover { background: #555 !important; }\n \n /* Selection */\n ::selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ';\n }\n \n function removeDarkMode() {\n var style = document.getElementById('universal-dark-mode-style');\n if (style) style.remove();\n }\n \n // Toggle with Alt+Shift+D\n document.addEventListener('keydown', function(e) {\n if (e.altKey && e.shiftKey && e.key === 'D') {\n e.preventDefault();\n enabled = !enabled;\n if (enabled) {\n applyDarkMode();\n console.log('[Universal Dark Mode] Enabled');\n } else {\n removeDarkMode();\n console.log('[Universal Dark Mode] Disabled');\n }\n }\n });\n \n // Apply on load\n applyDarkMode();\n \n // Re-apply on dynamic content\n var observer = new MutationObserver(function(mutations) {\n if (enabled && !document.getElementById('universal-dark-mode-style')) {\n applyDarkMode();\n }\n });\n observer.observe(document.head, { childList: true });\n \n console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');\n})();", "Universal Dark Mode"); } } catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); } })(); })();
Skip to content

fix(async): set default concurrency to 10 tasks - #2256

Merged
jhamman merged 3 commits into
zarr-developers:v3from
jhamman:fix/default-concurrency
Sep 26, 2024
Merged

fix(async): set default concurrency to 10 tasks#2256
jhamman merged 3 commits into
zarr-developers:v3from
jhamman:fix/default-concurrency

Conversation

@jhamman

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Unbounded concurrency is not a good idea. This sets the default to 10.

TODO:

  • Add unit tests and/or doctests in docstrings
  • Add docstrings and API docs for any new/modified user-facing classes and functions
  • New/modified features documented in docs/tutorial.rst
  • Changes documented in docs/release.rst
  • GitHub Actions have all passed
  • Test coverage is 100% (Codecov passes)

@dcherian

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I don't have an opinion but this is what the threading module does

Default value of max_workers is changed to min(32, os.cpu_count() + 4). This default value preserves at least 5 workers for I/O bound tasks. It utilizes at most 32 CPU cores for CPU bound tasks which release the GIL. And it avoids using very large resources implicitly on many-core machines.

@jhamman

Copy link
Copy Markdown
MemberAuthor

There are really two issues here.

  1. how many threads we try to use at once, and
  2. how many concurrent IO operations we attempt

Right now, we are using a single config for both of these but in the future, we may consider allowing users to configure the size of the thread pool and/or multi-threading behavior separately.

@jhamman
jhammanforce-pushed the fix/default-concurrency branch from 4ed330c to 5e2075bCompareSeptember 25, 2024 22:13
@jhamman
jhammanforce-pushed the fix/default-concurrency branch from 5e2075b to 818fc73CompareSeptember 25, 2024 22:15
@dcherian

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But perhaps the default should scale with cpu_count like what threading does: min(32, os.cpu_count() + 4). If we are making arbitrary choices, perhaps we just go with what the standard library does.

@jhamman

Copy link
Copy Markdown
MemberAuthor

But perhaps the default should scale with cpu_count like what threading does: min(32, os.cpu_count() + 4). If we are making arbitrary choices, perhaps we just go with what the standard library does.

I hear what you are saying. But this applies to both IO and tasks that use to_thread. I would like us to revisit the way we distribute work to IO and threaded tasks another day.

@jhammanjhamman added this to the 3.0.0 milestone Sep 26, 2024
@jhamman
jhamman merged commit 4515671 into zarr-developers:v3Sep 26, 2024
dcherian added a commit to dcherian/zarr-python that referenced this pull request Sep 27, 2024
* v3: (21 commits)
Default zarr.open to open_group if shape is not provided (zarr-developers#2158)
feat: metadata-only support for storage transformers metadata (zarr-developers#2180)
fix(async): set default concurrency to 10 tasks (zarr-developers#2256)
chore(deps): drop support for python 3.10 and numpy 1.24 (zarr-developers#2217)
feature(store): add LoggingStore wrapper (zarr-developers#2231)
Apply assorted ruff/flake8-simplify rules (SIM) (zarr-developers#2259)
Add array storage helpers (zarr-developers#2065)
Apply ruff/flake8-annotations rule ANN204 (zarr-developers#2258)
No need to run DeepSource any more - we use ruff (zarr-developers#2261)
Remove unnecessary lambda expression (zarr-developers#2260)
Enforce ruff/flake8-comprehensions rules (C4) (zarr-developers#2239)
Use `map(str, *)` in `test_accessed_chunks` (zarr-developers#2229)
Replace Gitter with Zulip (zarr-developers#2254)
Enforce ruff/flake8-pytest-style rules (PT) (zarr-developers#2236)
Fix multiple identical imports (zarr-developers#2241)
Enforce ruff/flake8-return rules (RET) (zarr-developers#2237)
Enforce ruff/flynt rules (FLY) (zarr-developers#2240)
Fix fill_value handling for complex dtypes (zarr-developers#2200)
Update V2 codec pipeline to use concrete classes (zarr-developers#2244)
Apply and enforce more ruff rules (zarr-developers#2053)
...
@jhammanjhamman added the V3 label Oct 11, 2024
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Status: Done

Development

Successfully merging this pull request may close these issues.

2 participants

@jhamman@dcherian