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2 changes: 1 addition & 1 deletion .github/PULL_REQUEST_TEMPLATE.md
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,6 +4,6 @@ TODO:
* [ ] Add unit tests and/or doctests in docstrings
* [ ] Add docstrings and API docs for any new/modified user-facing classes and functions
* [ ] New/modified features documented in `docs/user-guide/*.rst`
* [ ] Changes documented in `docs/release-notes.rst`
* [ ] Changes documented as a new file in `changes/`
* [ ] GitHub Actions have all passed
* [ ] Test coverage is 100% (Codecov passes)
6 changes: 4 additions & 2 deletions .github/labeler.yml
Original file line numberDiff line numberDiff line change
@@ -1,2 +1,4 @@
needs release notes:
- all: ['!docs/release-notes.rst']
- needs release notes:
- all:
- changed-files:
- any-glob-to-any-file: 'changes/*.rst'
5 changes: 4 additions & 1 deletion .github/workflows/needs_release_notes.yml
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,8 +4,11 @@ on:
- pull_request_target

jobs:
triage:
labeler:
if: ${{ github.event.pull_request.user.login != 'dependabot[bot]' }} && ${{ github.event.pull_request.user.login != 'pre-commit-ci[bot]' }}
permissions:
contents: read
pull-requests: write
runs-on: ubuntu-latest
steps:
- uses: actions/labeler@8558fd74291d67161a8a78ce36a881fa63b766a9 # v5.0.0
Expand Down
4 changes: 4 additions & 0 deletions .pre-commit-config.yaml
Original file line numberDiff line numberDiff line change
Expand Up@@ -49,3 +49,7 @@ repos:
rev: v1.8.0
hooks:
- id: numpydoc-validation
- repo: https://github.com/twisted/towncrier
rev: 23.11.0
hooks:
- id: towncrier-check
7 changes: 7 additions & 0 deletions .readthedocs.yaml
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,6 +4,13 @@ build:
os: ubuntu-22.04
tools:
python: "3.12"
jobs:
pre_build:
- |
if [ "$READTHEDOCS_VERSION_TYPE" != "tag" ];
then
towncrier build --version Unreleased --yes;
fi

sphinx:
configuration: docs/conf.py
Expand Down
1 change: 1 addition & 0 deletions changes/.gitignore
Original file line numberDiff line numberDiff line change
@@ -0,0 +1 @@
!.gitignore
1 change: 1 addition & 0 deletions changes/2681.bugfix.rst
Original file line numberDiff line numberDiff line change
@@ -0,0 +1 @@
Added backwards compatibility for Zarr format 2 structured arrays.
2 changes: 2 additions & 0 deletions changes/2736.doc.rst
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,2 @@
Changed the machinery for creating changelog entries.
Now individual entries should be added as files to the `changes` directory in the `zarr-python` repository, instead of directly to the changelog file.
14 changes: 14 additions & 0 deletions changes/README.md
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,14 @@
Writing a changelog entry
-------------------------

Please put a new file in this directory named `xxxx.<type>.rst`, where

- `xxxx` is the pull request number associated with this entry
- `<type>` is one of:
- feature
- bugfix
- doc
- removal
- misc

Inside the file, please write a short description of what you have changed, and how it impacts users of `zarr-python`.
14 changes: 6 additions & 8 deletions docs/developers/contributing.rst
Original file line numberDiff line numberDiff line change
Expand Up@@ -216,8 +216,8 @@ The documentation consists both of prose and API documentation. All user-facing
and functions are included in the API documentation, under the ``docs/api`` folder
using the `autodoc <https://www.sphinx-doc.org/en/master/usage/extensions/autodoc.html>`_
extension to sphinx. Any new features or important usage information should be included in the
user-guide (``docs/user-guide``). Any changes should also be included in the release
notes (``docs/release-notes.rst``).
user-guide (``docs/user-guide``). Any changes should also be included as a new file in the
:file:`changes` directory.

The documentation can be built locally by running::

Expand DownExpand Up@@ -335,11 +335,9 @@ Release procedure

Pre-release
"""""""""""
1. Make sure that all pull requests which will be
included in the release have been properly documented in
:file:`docs/release-notes.rst`.
2. Rename the "Unreleased" section heading in :file:`docs/release-notes.rst`
to the version you are about to release.
1. Make sure that all pull requests which will be included in the release
have been properly documented as changelog files in :file:`changes`.
Comment thread
d-v-b marked this conversation as resolved.
2. Run ``towncrier build --version x.y.z`` to create the changelog.

Releasing
"""""""""
Expand All@@ -352,7 +350,7 @@ appropriate suffix (e.g. `v0.0.0a1` or `v0.0.0rc2`).

Set the description of the release to::

See release notes https://zarr.readthedocs.io/en/stable/release.html#release-0-0-0
See release notes https://zarr.readthedocs.io/en/stable/release-notes.html#release-0-0-0

replacing the correct version numbers. For pre-release versions,
the URL should omit the pre-release suffix, e.g. "a1" or "rc1".
Expand Down
16 changes: 1 addition & 15 deletions docs/release-notes.rst
Original file line numberDiff line numberDiff line change
@@ -1,22 +1,8 @@
Release notes
=============

Unreleased
----------
.. towncrier release notes start

Bug fixes
~~~~~~~~~

* Backwards compatibility for Zarr format 2 structured arrays (:issue:`2134`)

Features
~~~~~~~~

Documentation
~~~~~~~~~~~~~

Other
~~~~~

3.0.1 (Jan. 17, 2025)
---------------------
Expand Down
10 changes: 10 additions & 0 deletions pyproject.toml
Original file line numberDiff line numberDiff line change
Expand Up@@ -85,6 +85,7 @@ test = [
]
optional = ["rich", "universal-pathlib"]
docs = [
# Doc building
'sphinx==8.1.3',
'sphinx-autobuild>=2021.3.14',
'sphinx-autoapi==3.4.0',
Expand All@@ -94,6 +95,9 @@ docs = [
'sphinx-reredirects',
'pydata-sphinx-theme',
'numpydoc',
# Changelog generation
'towncrier',
# Optional dependencies to run examples
'numcodecs[msgpack]',
'rich',
's3fs',
Expand DownExpand Up@@ -415,3 +419,9 @@ checks = [
"PR05",
"PR06",
]

[tool.towncrier]
directory = 'changes'
filename = "docs/release-notes.rst"
underlines = ["-", "~", "^"]
issue_format = ":issue:`{issue}`"
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Add copy buttons to all
 blocks\n(function() {\n function addCopyButtons() {\n document.querySelectorAll('pre code').forEach(function(codeBlock) {\n if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;\n codeBlock.parentElement.setAttribute('data-copy-added', 'true');\n \n var btn = document.createElement('button');\n btn.textContent = 'Copy';\n btn.style.cssText = 'position:absolute;top:4px;right:4px;padding:2px 8px;font-size:11px;background:#4ecdc4;border:none;border-radius:4px;color:#1a1a2e;cursor:pointer;opacity:0.7;transition:opacity 0.2s;';\n btn.onmouseover = function() { this.style.opacity = '1'; };\n btn.onmouseout = function() { this.style.opacity = '0.7'; };\n btn.onclick = function() {\n navigator.clipboard.writeText(codeBlock.textContent).then(function() {\n btn.textContent = 'Copied!';\n setTimeout(function() { btn.textContent = 'Copy'; }, 1500);\n });\n };\n codeBlock.parentElement.style.position = 'relative';\n codeBlock.parentElement.appendChild(btn);\n });\n }\n \n addCopyButtons();\n \n // Re-run on dynamic content\n var observer = new MutationObserver(addCopyButtons);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Add Copy Buttons to Code Blocks");
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '
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2 changes: 1 addition & 1 deletion .github/PULL_REQUEST_TEMPLATE.md
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,6 +4,6 @@ TODO:
* [ ] Add unit tests and/or doctests in docstrings
* [ ] Add docstrings and API docs for any new/modified user-facing classes and functions
* [ ] New/modified features documented in `docs/user-guide/*.rst`
* [ ] Changes documented in `docs/release-notes.rst`
* [ ] Changes documented as a new file in `changes/`
* [ ] GitHub Actions have all passed
* [ ] Test coverage is 100% (Codecov passes)
6 changes: 4 additions & 2 deletions .github/labeler.yml
Original file line numberDiff line numberDiff line change
@@ -1,2 +1,4 @@
needs release notes:
- all: ['!docs/release-notes.rst']
- needs release notes:
- all:
- changed-files:
- any-glob-to-any-file: 'changes/*.rst'
5 changes: 4 additions & 1 deletion .github/workflows/needs_release_notes.yml
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,8 +4,11 @@ on:
- pull_request_target

jobs:
triage:
labeler:
if: ${{ github.event.pull_request.user.login != 'dependabot[bot]' }} && ${{ github.event.pull_request.user.login != 'pre-commit-ci[bot]' }}
permissions:
contents: read
pull-requests: write
runs-on: ubuntu-latest
steps:
- uses: actions/labeler@8558fd74291d67161a8a78ce36a881fa63b766a9 # v5.0.0
Expand Down
4 changes: 4 additions & 0 deletions .pre-commit-config.yaml
Original file line numberDiff line numberDiff line change
Expand Up@@ -49,3 +49,7 @@ repos:
rev: v1.8.0
hooks:
- id: numpydoc-validation
- repo: https://github.com/twisted/towncrier
rev: 23.11.0
hooks:
- id: towncrier-check
7 changes: 7 additions & 0 deletions .readthedocs.yaml
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,6 +4,13 @@ build:
os: ubuntu-22.04
tools:
python: "3.12"
jobs:
pre_build:
- |
if [ "$READTHEDOCS_VERSION_TYPE" != "tag" ];
then
towncrier build --version Unreleased --yes;
fi

sphinx:
configuration: docs/conf.py
Expand Down
1 change: 1 addition & 0 deletions changes/.gitignore
Original file line numberDiff line numberDiff line change
@@ -0,0 +1 @@
!.gitignore
1 change: 1 addition & 0 deletions changes/2681.bugfix.rst
Original file line numberDiff line numberDiff line change
@@ -0,0 +1 @@
Added backwards compatibility for Zarr format 2 structured arrays.
2 changes: 2 additions & 0 deletions changes/2736.doc.rst
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,2 @@
Changed the machinery for creating changelog entries.
Now individual entries should be added as files to the `changes` directory in the `zarr-python` repository, instead of directly to the changelog file.
14 changes: 14 additions & 0 deletions changes/README.md
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,14 @@
Writing a changelog entry
-------------------------

Please put a new file in this directory named `xxxx.<type>.rst`, where

- `xxxx` is the pull request number associated with this entry
- `<type>` is one of:
- feature
- bugfix
- doc
- removal
- misc

Inside the file, please write a short description of what you have changed, and how it impacts users of `zarr-python`.
14 changes: 6 additions & 8 deletions docs/developers/contributing.rst
Original file line numberDiff line numberDiff line change
Expand Up@@ -216,8 +216,8 @@ The documentation consists both of prose and API documentation. All user-facing
and functions are included in the API documentation, under the ``docs/api`` folder
using the `autodoc <https://www.sphinx-doc.org/en/master/usage/extensions/autodoc.html>`_
extension to sphinx. Any new features or important usage information should be included in the
user-guide (``docs/user-guide``). Any changes should also be included in the release
notes (``docs/release-notes.rst``).
user-guide (``docs/user-guide``). Any changes should also be included as a new file in the
:file:`changes` directory.

The documentation can be built locally by running::

Expand DownExpand Up@@ -335,11 +335,9 @@ Release procedure

Pre-release
"""""""""""
1. Make sure that all pull requests which will be
included in the release have been properly documented in
:file:`docs/release-notes.rst`.
2. Rename the "Unreleased" section heading in :file:`docs/release-notes.rst`
to the version you are about to release.
1. Make sure that all pull requests which will be included in the release
have been properly documented as changelog files in :file:`changes`.
Comment thread
d-v-b marked this conversation as resolved.
2. Run ``towncrier build --version x.y.z`` to create the changelog.

Releasing
"""""""""
Expand All@@ -352,7 +350,7 @@ appropriate suffix (e.g. `v0.0.0a1` or `v0.0.0rc2`).

Set the description of the release to::

See release notes https://zarr.readthedocs.io/en/stable/release.html#release-0-0-0
See release notes https://zarr.readthedocs.io/en/stable/release-notes.html#release-0-0-0

replacing the correct version numbers. For pre-release versions,
the URL should omit the pre-release suffix, e.g. "a1" or "rc1".
Expand Down
16 changes: 1 addition & 15 deletions docs/release-notes.rst
Original file line numberDiff line numberDiff line change
@@ -1,22 +1,8 @@
Release notes
=============

Unreleased
----------
.. towncrier release notes start

Bug fixes
~~~~~~~~~

* Backwards compatibility for Zarr format 2 structured arrays (:issue:`2134`)

Features
~~~~~~~~

Documentation
~~~~~~~~~~~~~

Other
~~~~~

3.0.1 (Jan. 17, 2025)
---------------------
Expand Down
10 changes: 10 additions & 0 deletions pyproject.toml
Original file line numberDiff line numberDiff line change
Expand Up@@ -85,6 +85,7 @@ test = [
]
optional = ["rich", "universal-pathlib"]
docs = [
# Doc building
'sphinx==8.1.3',
'sphinx-autobuild>=2021.3.14',
'sphinx-autoapi==3.4.0',
Expand All@@ -94,6 +95,9 @@ docs = [
'sphinx-reredirects',
'pydata-sphinx-theme',
'numpydoc',
# Changelog generation
'towncrier',
# Optional dependencies to run examples
'numcodecs[msgpack]',
'rich',
's3fs',
Expand DownExpand Up@@ -415,3 +419,9 @@ checks = [
"PR05",
"PR06",
]

[tool.towncrier]
directory = 'changes'
filename = "docs/release-notes.rst"
underlines = ["-", "~", "^"]
issue_format = ":issue:`{issue}`"
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Force GitHub README to respect dark mode\n(function() {\n var style = document.createElement('style');\n style.textContent = '\n .markdown-body {\n color-scheme: dark light;\n }\n .markdown-body pre { background: #161b22 !important; }\n .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }\n .markdown-body table th, .markdown-body table td { border-color: #30363d !important; }\n .markdown-body img { background: #0d1117; }\n .markdown-body blockquote { border-left-color: #8b949e; }\n .markdown-body hr { border-color: #30363d; }\n ';\n document.head.appendChild(style);\n})();", "GitHub Dark Mode README Fix"); } } catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content
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2 changes: 1 addition & 1 deletion .github/PULL_REQUEST_TEMPLATE.md
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,6 +4,6 @@ TODO:
* [ ] Add unit tests and/or doctests in docstrings
* [ ] Add docstrings and API docs for any new/modified user-facing classes and functions
* [ ] New/modified features documented in `docs/user-guide/*.rst`
* [ ] Changes documented in `docs/release-notes.rst`
* [ ] Changes documented as a new file in `changes/`
* [ ] GitHub Actions have all passed
* [ ] Test coverage is 100% (Codecov passes)
6 changes: 4 additions & 2 deletions .github/labeler.yml
Original file line numberDiff line numberDiff line change
@@ -1,2 +1,4 @@
needs release notes:
- all: ['!docs/release-notes.rst']
- needs release notes:
- all:
- changed-files:
- any-glob-to-any-file: 'changes/*.rst'
5 changes: 4 additions & 1 deletion .github/workflows/needs_release_notes.yml
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,8 +4,11 @@ on:
- pull_request_target

jobs:
triage:
labeler:
if: ${{ github.event.pull_request.user.login != 'dependabot[bot]' }} && ${{ github.event.pull_request.user.login != 'pre-commit-ci[bot]' }}
permissions:
contents: read
pull-requests: write
runs-on: ubuntu-latest
steps:
- uses: actions/labeler@8558fd74291d67161a8a78ce36a881fa63b766a9 # v5.0.0
Expand Down
4 changes: 4 additions & 0 deletions .pre-commit-config.yaml
Original file line numberDiff line numberDiff line change
Expand Up@@ -49,3 +49,7 @@ repos:
rev: v1.8.0
hooks:
- id: numpydoc-validation
- repo: https://github.com/twisted/towncrier
rev: 23.11.0
hooks:
- id: towncrier-check
7 changes: 7 additions & 0 deletions .readthedocs.yaml
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,6 +4,13 @@ build:
os: ubuntu-22.04
tools:
python: "3.12"
jobs:
pre_build:
- |
if [ "$READTHEDOCS_VERSION_TYPE" != "tag" ];
then
towncrier build --version Unreleased --yes;
fi

sphinx:
configuration: docs/conf.py
Expand Down
1 change: 1 addition & 0 deletions changes/.gitignore
Original file line numberDiff line numberDiff line change
@@ -0,0 +1 @@
!.gitignore
1 change: 1 addition & 0 deletions changes/2681.bugfix.rst
Original file line numberDiff line numberDiff line change
@@ -0,0 +1 @@
Added backwards compatibility for Zarr format 2 structured arrays.
2 changes: 2 additions & 0 deletions changes/2736.doc.rst
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,2 @@
Changed the machinery for creating changelog entries.
Now individual entries should be added as files to the `changes` directory in the `zarr-python` repository, instead of directly to the changelog file.
14 changes: 14 additions & 0 deletions changes/README.md
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,14 @@
Writing a changelog entry
-------------------------

Please put a new file in this directory named `xxxx.<type>.rst`, where

- `xxxx` is the pull request number associated with this entry
- `<type>` is one of:
- feature
- bugfix
- doc
- removal
- misc

Inside the file, please write a short description of what you have changed, and how it impacts users of `zarr-python`.
14 changes: 6 additions & 8 deletions docs/developers/contributing.rst
Original file line numberDiff line numberDiff line change
Expand Up@@ -216,8 +216,8 @@ The documentation consists both of prose and API documentation. All user-facing
and functions are included in the API documentation, under the ``docs/api`` folder
using the `autodoc <https://www.sphinx-doc.org/en/master/usage/extensions/autodoc.html>`_
extension to sphinx. Any new features or important usage information should be included in the
user-guide (``docs/user-guide``). Any changes should also be included in the release
notes (``docs/release-notes.rst``).
user-guide (``docs/user-guide``). Any changes should also be included as a new file in the
:file:`changes` directory.

The documentation can be built locally by running::

Expand DownExpand Up@@ -335,11 +335,9 @@ Release procedure

Pre-release
"""""""""""
1. Make sure that all pull requests which will be
included in the release have been properly documented in
:file:`docs/release-notes.rst`.
2. Rename the "Unreleased" section heading in :file:`docs/release-notes.rst`
to the version you are about to release.
1. Make sure that all pull requests which will be included in the release
have been properly documented as changelog files in :file:`changes`.
Comment thread
d-v-b marked this conversation as resolved.
2. Run ``towncrier build --version x.y.z`` to create the changelog.

Releasing
"""""""""
Expand All@@ -352,7 +350,7 @@ appropriate suffix (e.g. `v0.0.0a1` or `v0.0.0rc2`).

Set the description of the release to::

See release notes https://zarr.readthedocs.io/en/stable/release.html#release-0-0-0
See release notes https://zarr.readthedocs.io/en/stable/release-notes.html#release-0-0-0

replacing the correct version numbers. For pre-release versions,
the URL should omit the pre-release suffix, e.g. "a1" or "rc1".
Expand Down
16 changes: 1 addition & 15 deletions docs/release-notes.rst
Original file line numberDiff line numberDiff line change
@@ -1,22 +1,8 @@
Release notes
=============

Unreleased
----------
.. towncrier release notes start

Bug fixes
~~~~~~~~~

* Backwards compatibility for Zarr format 2 structured arrays (:issue:`2134`)

Features
~~~~~~~~

Documentation
~~~~~~~~~~~~~

Other
~~~~~

3.0.1 (Jan. 17, 2025)
---------------------
Expand Down
10 changes: 10 additions & 0 deletions pyproject.toml
Original file line numberDiff line numberDiff line change
Expand Up@@ -85,6 +85,7 @@ test = [
]
optional = ["rich", "universal-pathlib"]
docs = [
# Doc building
'sphinx==8.1.3',
'sphinx-autobuild>=2021.3.14',
'sphinx-autoapi==3.4.0',
Expand All@@ -94,6 +95,9 @@ docs = [
'sphinx-reredirects',
'pydata-sphinx-theme',
'numpydoc',
# Changelog generation
'towncrier',
# Optional dependencies to run examples
'numcodecs[msgpack]',
'rich',
's3fs',
Expand DownExpand Up@@ -415,3 +419,9 @@ checks = [
"PR05",
"PR06",
]

[tool.towncrier]
directory = 'changes'
filename = "docs/release-notes.rst"
underlines = ["-", "~", "^"]
issue_format = ":issue:`{issue}`"
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Highlight search terms from Google/DuckDuckGo/Bing referrer\n(function() {\n var ref = document.referrer;\n var terms = [];\n \n if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {\n var url = new URL(ref);\n var q = url.searchParams.get('q') || url.searchParams.get('p');\n if (q) {\n terms = q.split(/\\s+/).filter(function(t) { return t.length > 2; });\n }\n }\n \n if (terms.length === 0) return;\n \n var style = document.createElement('style');\n style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';\n document.head.appendChild(style);\n \n function highlight(node) {\n if (node.nodeType === 3) { // text node\n var text = node.textContent;\n var found = false;\n terms.forEach(function(term) {\n var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\\]\\\\]/g, '\\\\') + ')', 'gi');\n if (regex.test(text)) {\n found = true;\n var frag = document.createDocumentFragment();\n var parts = text.split(regex);\n parts.forEach(function(part, i) {\n if (i % 2 === 0) {\n frag.appendChild(document.createTextNode(part));\n } else {\n var span = document.createElement('span');\n span.className = 'userscript-highlight';\n span.textContent = part;\n frag.appendChild(span);\n }\n });\n node.parentNode.replaceChild(frag, node);\n }\n });\n } else if (node.nodeType === 1 && node.childNodes) { // element\n var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];\n if (!skipTags.includes(node.tagName)) {\n Array.from(node.childNodes).forEach(highlight);\n }\n }\n }\n \n highlight(document.body);\n \n // Re-highlight on dynamic content\n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1 || node.nodeType === 3) highlight(node);\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Highlight Search Terms"); } } catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
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2 changes: 1 addition & 1 deletion .github/PULL_REQUEST_TEMPLATE.md
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,6 +4,6 @@ TODO:
* [ ] Add unit tests and/or doctests in docstrings
* [ ] Add docstrings and API docs for any new/modified user-facing classes and functions
* [ ] New/modified features documented in `docs/user-guide/*.rst`
* [ ] Changes documented in `docs/release-notes.rst`
* [ ] Changes documented as a new file in `changes/`
* [ ] GitHub Actions have all passed
* [ ] Test coverage is 100% (Codecov passes)
6 changes: 4 additions & 2 deletions .github/labeler.yml
Original file line numberDiff line numberDiff line change
@@ -1,2 +1,4 @@
needs release notes:
- all: ['!docs/release-notes.rst']
- needs release notes:
- all:
- changed-files:
- any-glob-to-any-file: 'changes/*.rst'
5 changes: 4 additions & 1 deletion .github/workflows/needs_release_notes.yml
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,8 +4,11 @@ on:
- pull_request_target

jobs:
triage:
labeler:
if: ${{ github.event.pull_request.user.login != 'dependabot[bot]' }} && ${{ github.event.pull_request.user.login != 'pre-commit-ci[bot]' }}
permissions:
contents: read
pull-requests: write
runs-on: ubuntu-latest
steps:
- uses: actions/labeler@8558fd74291d67161a8a78ce36a881fa63b766a9 # v5.0.0
Expand Down
4 changes: 4 additions & 0 deletions .pre-commit-config.yaml
Original file line numberDiff line numberDiff line change
Expand Up@@ -49,3 +49,7 @@ repos:
rev: v1.8.0
hooks:
- id: numpydoc-validation
- repo: https://github.com/twisted/towncrier
rev: 23.11.0
hooks:
- id: towncrier-check
7 changes: 7 additions & 0 deletions .readthedocs.yaml
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,6 +4,13 @@ build:
os: ubuntu-22.04
tools:
python: "3.12"
jobs:
pre_build:
- |
if [ "$READTHEDOCS_VERSION_TYPE" != "tag" ];
then
towncrier build --version Unreleased --yes;
fi

sphinx:
configuration: docs/conf.py
Expand Down
1 change: 1 addition & 0 deletions changes/.gitignore
Original file line numberDiff line numberDiff line change
@@ -0,0 +1 @@
!.gitignore
1 change: 1 addition & 0 deletions changes/2681.bugfix.rst
Original file line numberDiff line numberDiff line change
@@ -0,0 +1 @@
Added backwards compatibility for Zarr format 2 structured arrays.
2 changes: 2 additions & 0 deletions changes/2736.doc.rst
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,2 @@
Changed the machinery for creating changelog entries.
Now individual entries should be added as files to the `changes` directory in the `zarr-python` repository, instead of directly to the changelog file.
14 changes: 14 additions & 0 deletions changes/README.md
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,14 @@
Writing a changelog entry
-------------------------

Please put a new file in this directory named `xxxx.<type>.rst`, where

- `xxxx` is the pull request number associated with this entry
- `<type>` is one of:
- feature
- bugfix
- doc
- removal
- misc

Inside the file, please write a short description of what you have changed, and how it impacts users of `zarr-python`.
14 changes: 6 additions & 8 deletions docs/developers/contributing.rst
Original file line numberDiff line numberDiff line change
Expand Up@@ -216,8 +216,8 @@ The documentation consists both of prose and API documentation. All user-facing
and functions are included in the API documentation, under the ``docs/api`` folder
using the `autodoc <https://www.sphinx-doc.org/en/master/usage/extensions/autodoc.html>`_
extension to sphinx. Any new features or important usage information should be included in the
user-guide (``docs/user-guide``). Any changes should also be included in the release
notes (``docs/release-notes.rst``).
user-guide (``docs/user-guide``). Any changes should also be included as a new file in the
:file:`changes` directory.

The documentation can be built locally by running::

Expand DownExpand Up@@ -335,11 +335,9 @@ Release procedure

Pre-release
"""""""""""
1. Make sure that all pull requests which will be
included in the release have been properly documented in
:file:`docs/release-notes.rst`.
2. Rename the "Unreleased" section heading in :file:`docs/release-notes.rst`
to the version you are about to release.
1. Make sure that all pull requests which will be included in the release
have been properly documented as changelog files in :file:`changes`.
Comment thread
d-v-b marked this conversation as resolved.
2. Run ``towncrier build --version x.y.z`` to create the changelog.

Releasing
"""""""""
Expand All@@ -352,7 +350,7 @@ appropriate suffix (e.g. `v0.0.0a1` or `v0.0.0rc2`).

Set the description of the release to::

See release notes https://zarr.readthedocs.io/en/stable/release.html#release-0-0-0
See release notes https://zarr.readthedocs.io/en/stable/release-notes.html#release-0-0-0

replacing the correct version numbers. For pre-release versions,
the URL should omit the pre-release suffix, e.g. "a1" or "rc1".
Expand Down
16 changes: 1 addition & 15 deletions docs/release-notes.rst
Original file line numberDiff line numberDiff line change
@@ -1,22 +1,8 @@
Release notes
=============

Unreleased
----------
.. towncrier release notes start

Bug fixes
~~~~~~~~~

* Backwards compatibility for Zarr format 2 structured arrays (:issue:`2134`)

Features
~~~~~~~~

Documentation
~~~~~~~~~~~~~

Other
~~~~~

3.0.1 (Jan. 17, 2025)
---------------------
Expand Down
10 changes: 10 additions & 0 deletions pyproject.toml
Original file line numberDiff line numberDiff line change
Expand Up@@ -85,6 +85,7 @@ test = [
]
optional = ["rich", "universal-pathlib"]
docs = [
# Doc building
'sphinx==8.1.3',
'sphinx-autobuild>=2021.3.14',
'sphinx-autoapi==3.4.0',
Expand All@@ -94,6 +95,9 @@ docs = [
'sphinx-reredirects',
'pydata-sphinx-theme',
'numpydoc',
# Changelog generation
'towncrier',
# Optional dependencies to run examples
'numcodecs[msgpack]',
'rich',
's3fs',
Expand DownExpand Up@@ -415,3 +419,9 @@ checks = [
"PR05",
"PR06",
]

[tool.towncrier]
directory = 'changes'
filename = "docs/release-notes.rst"
underlines = ["-", "~", "^"]
issue_format = ":issue:`{issue}`"
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Strip utm_, fbclid, gclid, etc. from all links on page\n(function() {\n var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',\n 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',\n 'ref', 'ref_src', 'source', 'medium', 'campaign'];\n \n function cleanUrl(url) {\n try {\n var u = new URL(url, window.location.origin);\n var changed = false;\n trackingParams.forEach(function(p) {\n if (u.searchParams.has(p)) {\n u.searchParams.delete(p);\n changed = true;\n }\n });\n return changed ? u.toString() : url;\n } catch (e) {\n return url;\n }\n }\n \n function cleanLinks() {\n document.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n \n cleanLinks();\n \n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1) {\n if (node.tagName === 'A') cleanLinks();\n node.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Remove Tracking Parameters from Links"); } } catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); } })(); (function(){ try { var __m = "youtube.com"; var __re = new RegExp('^' + "youtube\\.com" + '
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2 changes: 1 addition & 1 deletion .github/PULL_REQUEST_TEMPLATE.md
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,6 +4,6 @@ TODO:
* [ ] Add unit tests and/or doctests in docstrings
* [ ] Add docstrings and API docs for any new/modified user-facing classes and functions
* [ ] New/modified features documented in `docs/user-guide/*.rst`
* [ ] Changes documented in `docs/release-notes.rst`
* [ ] Changes documented as a new file in `changes/`
* [ ] GitHub Actions have all passed
* [ ] Test coverage is 100% (Codecov passes)
6 changes: 4 additions & 2 deletions .github/labeler.yml
Original file line numberDiff line numberDiff line change
@@ -1,2 +1,4 @@
needs release notes:
- all: ['!docs/release-notes.rst']
- needs release notes:
- all:
- changed-files:
- any-glob-to-any-file: 'changes/*.rst'
5 changes: 4 additions & 1 deletion .github/workflows/needs_release_notes.yml
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,8 +4,11 @@ on:
- pull_request_target

jobs:
triage:
labeler:
if: ${{ github.event.pull_request.user.login != 'dependabot[bot]' }} && ${{ github.event.pull_request.user.login != 'pre-commit-ci[bot]' }}
permissions:
contents: read
pull-requests: write
runs-on: ubuntu-latest
steps:
- uses: actions/labeler@8558fd74291d67161a8a78ce36a881fa63b766a9 # v5.0.0
Expand Down
4 changes: 4 additions & 0 deletions .pre-commit-config.yaml
Original file line numberDiff line numberDiff line change
Expand Up@@ -49,3 +49,7 @@ repos:
rev: v1.8.0
hooks:
- id: numpydoc-validation
- repo: https://github.com/twisted/towncrier
rev: 23.11.0
hooks:
- id: towncrier-check
7 changes: 7 additions & 0 deletions .readthedocs.yaml
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,6 +4,13 @@ build:
os: ubuntu-22.04
tools:
python: "3.12"
jobs:
pre_build:
- |
if [ "$READTHEDOCS_VERSION_TYPE" != "tag" ];
then
towncrier build --version Unreleased --yes;
fi

sphinx:
configuration: docs/conf.py
Expand Down
1 change: 1 addition & 0 deletions changes/.gitignore
Original file line numberDiff line numberDiff line change
@@ -0,0 +1 @@
!.gitignore
1 change: 1 addition & 0 deletions changes/2681.bugfix.rst
Original file line numberDiff line numberDiff line change
@@ -0,0 +1 @@
Added backwards compatibility for Zarr format 2 structured arrays.
2 changes: 2 additions & 0 deletions changes/2736.doc.rst
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,2 @@
Changed the machinery for creating changelog entries.
Now individual entries should be added as files to the `changes` directory in the `zarr-python` repository, instead of directly to the changelog file.
14 changes: 14 additions & 0 deletions changes/README.md
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,14 @@
Writing a changelog entry
-------------------------

Please put a new file in this directory named `xxxx.<type>.rst`, where

- `xxxx` is the pull request number associated with this entry
- `<type>` is one of:
- feature
- bugfix
- doc
- removal
- misc

Inside the file, please write a short description of what you have changed, and how it impacts users of `zarr-python`.
14 changes: 6 additions & 8 deletions docs/developers/contributing.rst
Original file line numberDiff line numberDiff line change
Expand Up@@ -216,8 +216,8 @@ The documentation consists both of prose and API documentation. All user-facing
and functions are included in the API documentation, under the ``docs/api`` folder
using the `autodoc <https://www.sphinx-doc.org/en/master/usage/extensions/autodoc.html>`_
extension to sphinx. Any new features or important usage information should be included in the
user-guide (``docs/user-guide``). Any changes should also be included in the release
notes (``docs/release-notes.rst``).
user-guide (``docs/user-guide``). Any changes should also be included as a new file in the
:file:`changes` directory.

The documentation can be built locally by running::

Expand DownExpand Up@@ -335,11 +335,9 @@ Release procedure

Pre-release
"""""""""""
1. Make sure that all pull requests which will be
included in the release have been properly documented in
:file:`docs/release-notes.rst`.
2. Rename the "Unreleased" section heading in :file:`docs/release-notes.rst`
to the version you are about to release.
1. Make sure that all pull requests which will be included in the release
have been properly documented as changelog files in :file:`changes`.
Comment thread
d-v-b marked this conversation as resolved.
2. Run ``towncrier build --version x.y.z`` to create the changelog.

Releasing
"""""""""
Expand All@@ -352,7 +350,7 @@ appropriate suffix (e.g. `v0.0.0a1` or `v0.0.0rc2`).

Set the description of the release to::

See release notes https://zarr.readthedocs.io/en/stable/release.html#release-0-0-0
See release notes https://zarr.readthedocs.io/en/stable/release-notes.html#release-0-0-0

replacing the correct version numbers. For pre-release versions,
the URL should omit the pre-release suffix, e.g. "a1" or "rc1".
Expand Down
16 changes: 1 addition & 15 deletions docs/release-notes.rst
Original file line numberDiff line numberDiff line change
@@ -1,22 +1,8 @@
Release notes
=============

Unreleased
----------
.. towncrier release notes start

Bug fixes
~~~~~~~~~

* Backwards compatibility for Zarr format 2 structured arrays (:issue:`2134`)

Features
~~~~~~~~

Documentation
~~~~~~~~~~~~~

Other
~~~~~

3.0.1 (Jan. 17, 2025)
---------------------
Expand Down
10 changes: 10 additions & 0 deletions pyproject.toml
Original file line numberDiff line numberDiff line change
Expand Up@@ -85,6 +85,7 @@ test = [
]
optional = ["rich", "universal-pathlib"]
docs = [
# Doc building
'sphinx==8.1.3',
'sphinx-autobuild>=2021.3.14',
'sphinx-autoapi==3.4.0',
Expand All@@ -94,6 +95,9 @@ docs = [
'sphinx-reredirects',
'pydata-sphinx-theme',
'numpydoc',
# Changelog generation
'towncrier',
# Optional dependencies to run examples
'numcodecs[msgpack]',
'rich',
's3fs',
Expand DownExpand Up@@ -415,3 +419,9 @@ checks = [
"PR05",
"PR06",
]

[tool.towncrier]
directory = 'changes'
filename = "docs/release-notes.rst"
underlines = ["-", "~", "^"]
issue_format = ":issue:`{issue}`"
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Auto-enable theater mode on YouTube\n(function() {\n function tryTheater() {\n var btn = document.querySelector('button[aria-label=\"Theater mode\"], ytd-player #player button[title=\"Theater mode\"]');\n if (btn && !btn.classList.contains('activated')) {\n btn.click();\n }\n }\n \n // Try immediately\n tryTheater();\n \n // Try after navigation (SPA)\n var lastUrl = location.href;\n setInterval(function() {\n if (location.href !== lastUrl) {\n lastUrl = location.href;\n setTimeout(tryTheater, 500);\n }\n }, 1000);\n \n // Also try on player load\n var observer = new MutationObserver(tryTheater);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "YouTube Theater Mode Default"); } } catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
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2 changes: 1 addition & 1 deletion .github/PULL_REQUEST_TEMPLATE.md
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,6 +4,6 @@ TODO:
* [ ] Add unit tests and/or doctests in docstrings
* [ ] Add docstrings and API docs for any new/modified user-facing classes and functions
* [ ] New/modified features documented in `docs/user-guide/*.rst`
* [ ] Changes documented in `docs/release-notes.rst`
* [ ] Changes documented as a new file in `changes/`
* [ ] GitHub Actions have all passed
* [ ] Test coverage is 100% (Codecov passes)
6 changes: 4 additions & 2 deletions .github/labeler.yml
Original file line numberDiff line numberDiff line change
@@ -1,2 +1,4 @@
needs release notes:
- all: ['!docs/release-notes.rst']
- needs release notes:
- all:
- changed-files:
- any-glob-to-any-file: 'changes/*.rst'
5 changes: 4 additions & 1 deletion .github/workflows/needs_release_notes.yml
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,8 +4,11 @@ on:
- pull_request_target

jobs:
triage:
labeler:
if: ${{ github.event.pull_request.user.login != 'dependabot[bot]' }} && ${{ github.event.pull_request.user.login != 'pre-commit-ci[bot]' }}
permissions:
contents: read
pull-requests: write
runs-on: ubuntu-latest
steps:
- uses: actions/labeler@8558fd74291d67161a8a78ce36a881fa63b766a9 # v5.0.0
Expand Down
4 changes: 4 additions & 0 deletions .pre-commit-config.yaml
Original file line numberDiff line numberDiff line change
Expand Up@@ -49,3 +49,7 @@ repos:
rev: v1.8.0
hooks:
- id: numpydoc-validation
- repo: https://github.com/twisted/towncrier
rev: 23.11.0
hooks:
- id: towncrier-check
7 changes: 7 additions & 0 deletions .readthedocs.yaml
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,6 +4,13 @@ build:
os: ubuntu-22.04
tools:
python: "3.12"
jobs:
pre_build:
- |
if [ "$READTHEDOCS_VERSION_TYPE" != "tag" ];
then
towncrier build --version Unreleased --yes;
fi

sphinx:
configuration: docs/conf.py
Expand Down
1 change: 1 addition & 0 deletions changes/.gitignore
Original file line numberDiff line numberDiff line change
@@ -0,0 +1 @@
!.gitignore
1 change: 1 addition & 0 deletions changes/2681.bugfix.rst
Original file line numberDiff line numberDiff line change
@@ -0,0 +1 @@
Added backwards compatibility for Zarr format 2 structured arrays.
2 changes: 2 additions & 0 deletions changes/2736.doc.rst
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,2 @@
Changed the machinery for creating changelog entries.
Now individual entries should be added as files to the `changes` directory in the `zarr-python` repository, instead of directly to the changelog file.
14 changes: 14 additions & 0 deletions changes/README.md
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,14 @@
Writing a changelog entry
-------------------------

Please put a new file in this directory named `xxxx.<type>.rst`, where

- `xxxx` is the pull request number associated with this entry
- `<type>` is one of:
- feature
- bugfix
- doc
- removal
- misc

Inside the file, please write a short description of what you have changed, and how it impacts users of `zarr-python`.
14 changes: 6 additions & 8 deletions docs/developers/contributing.rst
Original file line numberDiff line numberDiff line change
Expand Up@@ -216,8 +216,8 @@ The documentation consists both of prose and API documentation. All user-facing
and functions are included in the API documentation, under the ``docs/api`` folder
using the `autodoc <https://www.sphinx-doc.org/en/master/usage/extensions/autodoc.html>`_
extension to sphinx. Any new features or important usage information should be included in the
user-guide (``docs/user-guide``). Any changes should also be included in the release
notes (``docs/release-notes.rst``).
user-guide (``docs/user-guide``). Any changes should also be included as a new file in the
:file:`changes` directory.

The documentation can be built locally by running::

Expand DownExpand Up@@ -335,11 +335,9 @@ Release procedure

Pre-release
"""""""""""
1. Make sure that all pull requests which will be
included in the release have been properly documented in
:file:`docs/release-notes.rst`.
2. Rename the "Unreleased" section heading in :file:`docs/release-notes.rst`
to the version you are about to release.
1. Make sure that all pull requests which will be included in the release
have been properly documented as changelog files in :file:`changes`.
Comment thread
d-v-b marked this conversation as resolved.
2. Run ``towncrier build --version x.y.z`` to create the changelog.

Releasing
"""""""""
Expand All@@ -352,7 +350,7 @@ appropriate suffix (e.g. `v0.0.0a1` or `v0.0.0rc2`).

Set the description of the release to::

See release notes https://zarr.readthedocs.io/en/stable/release.html#release-0-0-0
See release notes https://zarr.readthedocs.io/en/stable/release-notes.html#release-0-0-0

replacing the correct version numbers. For pre-release versions,
the URL should omit the pre-release suffix, e.g. "a1" or "rc1".
Expand Down
16 changes: 1 addition & 15 deletions docs/release-notes.rst
Original file line numberDiff line numberDiff line change
@@ -1,22 +1,8 @@
Release notes
=============

Unreleased
----------
.. towncrier release notes start

Bug fixes
~~~~~~~~~

* Backwards compatibility for Zarr format 2 structured arrays (:issue:`2134`)

Features
~~~~~~~~

Documentation
~~~~~~~~~~~~~

Other
~~~~~

3.0.1 (Jan. 17, 2025)
---------------------
Expand Down
10 changes: 10 additions & 0 deletions pyproject.toml
Original file line numberDiff line numberDiff line change
Expand Up@@ -85,6 +85,7 @@ test = [
]
optional = ["rich", "universal-pathlib"]
docs = [
# Doc building
'sphinx==8.1.3',
'sphinx-autobuild>=2021.3.14',
'sphinx-autoapi==3.4.0',
Expand All@@ -94,6 +95,9 @@ docs = [
'sphinx-reredirects',
'pydata-sphinx-theme',
'numpydoc',
# Changelog generation
'towncrier',
# Optional dependencies to run examples
'numcodecs[msgpack]',
'rich',
's3fs',
Expand DownExpand Up@@ -415,3 +419,9 @@ checks = [
"PR05",
"PR06",
]

[tool.towncrier]
directory = 'changes'
filename = "docs/release-notes.rst"
underlines = ["-", "~", "^"]
issue_format = ":issue:`{issue}`"
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Remove or un-stick sticky/fixed headers that block content\n(function() {\n function unstick() {\n document.querySelectorAll('header, nav, [role=\"banner\"], .header, .navbar, .sticky, .fixed-top, [style*=\"position: fixed\"], [style*=\"position:sticky\"]').forEach(function(el) {\n if (el.style.position === 'fixed' || el.style.position === 'sticky' || \n getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {\n el.style.position = 'static';\n el.style.top = 'auto';\n el.style.zIndex = 'auto';\n }\n });\n }\n \n unstick();\n \n var observer = new MutationObserver(unstick);\n observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });\n})();", "Kill Sticky Headers"); } } catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
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2 changes: 1 addition & 1 deletion .github/PULL_REQUEST_TEMPLATE.md
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,6 +4,6 @@ TODO:
* [ ] Add unit tests and/or doctests in docstrings
* [ ] Add docstrings and API docs for any new/modified user-facing classes and functions
* [ ] New/modified features documented in `docs/user-guide/*.rst`
* [ ] Changes documented in `docs/release-notes.rst`
* [ ] Changes documented as a new file in `changes/`
* [ ] GitHub Actions have all passed
* [ ] Test coverage is 100% (Codecov passes)
6 changes: 4 additions & 2 deletions .github/labeler.yml
Original file line numberDiff line numberDiff line change
@@ -1,2 +1,4 @@
needs release notes:
- all: ['!docs/release-notes.rst']
- needs release notes:
- all:
- changed-files:
- any-glob-to-any-file: 'changes/*.rst'
5 changes: 4 additions & 1 deletion .github/workflows/needs_release_notes.yml
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,8 +4,11 @@ on:
- pull_request_target

jobs:
triage:
labeler:
if: ${{ github.event.pull_request.user.login != 'dependabot[bot]' }} && ${{ github.event.pull_request.user.login != 'pre-commit-ci[bot]' }}
permissions:
contents: read
pull-requests: write
runs-on: ubuntu-latest
steps:
- uses: actions/labeler@8558fd74291d67161a8a78ce36a881fa63b766a9 # v5.0.0
Expand Down
4 changes: 4 additions & 0 deletions .pre-commit-config.yaml
Original file line numberDiff line numberDiff line change
Expand Up@@ -49,3 +49,7 @@ repos:
rev: v1.8.0
hooks:
- id: numpydoc-validation
- repo: https://github.com/twisted/towncrier
rev: 23.11.0
hooks:
- id: towncrier-check
7 changes: 7 additions & 0 deletions .readthedocs.yaml
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,6 +4,13 @@ build:
os: ubuntu-22.04
tools:
python: "3.12"
jobs:
pre_build:
- |
if [ "$READTHEDOCS_VERSION_TYPE" != "tag" ];
then
towncrier build --version Unreleased --yes;
fi

sphinx:
configuration: docs/conf.py
Expand Down
1 change: 1 addition & 0 deletions changes/.gitignore
Original file line numberDiff line numberDiff line change
@@ -0,0 +1 @@
!.gitignore
1 change: 1 addition & 0 deletions changes/2681.bugfix.rst
Original file line numberDiff line numberDiff line change
@@ -0,0 +1 @@
Added backwards compatibility for Zarr format 2 structured arrays.
2 changes: 2 additions & 0 deletions changes/2736.doc.rst
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,2 @@
Changed the machinery for creating changelog entries.
Now individual entries should be added as files to the `changes` directory in the `zarr-python` repository, instead of directly to the changelog file.
14 changes: 14 additions & 0 deletions changes/README.md
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,14 @@
Writing a changelog entry
-------------------------

Please put a new file in this directory named `xxxx.<type>.rst`, where

- `xxxx` is the pull request number associated with this entry
- `<type>` is one of:
- feature
- bugfix
- doc
- removal
- misc

Inside the file, please write a short description of what you have changed, and how it impacts users of `zarr-python`.
14 changes: 6 additions & 8 deletions docs/developers/contributing.rst
Original file line numberDiff line numberDiff line change
Expand Up@@ -216,8 +216,8 @@ The documentation consists both of prose and API documentation. All user-facing
and functions are included in the API documentation, under the ``docs/api`` folder
using the `autodoc <https://www.sphinx-doc.org/en/master/usage/extensions/autodoc.html>`_
extension to sphinx. Any new features or important usage information should be included in the
user-guide (``docs/user-guide``). Any changes should also be included in the release
notes (``docs/release-notes.rst``).
user-guide (``docs/user-guide``). Any changes should also be included as a new file in the
:file:`changes` directory.

The documentation can be built locally by running::

Expand DownExpand Up@@ -335,11 +335,9 @@ Release procedure

Pre-release
"""""""""""
1. Make sure that all pull requests which will be
included in the release have been properly documented in
:file:`docs/release-notes.rst`.
2. Rename the "Unreleased" section heading in :file:`docs/release-notes.rst`
to the version you are about to release.
1. Make sure that all pull requests which will be included in the release
have been properly documented as changelog files in :file:`changes`.
Comment thread
d-v-b marked this conversation as resolved.
2. Run ``towncrier build --version x.y.z`` to create the changelog.

Releasing
"""""""""
Expand All@@ -352,7 +350,7 @@ appropriate suffix (e.g. `v0.0.0a1` or `v0.0.0rc2`).

Set the description of the release to::

See release notes https://zarr.readthedocs.io/en/stable/release.html#release-0-0-0
See release notes https://zarr.readthedocs.io/en/stable/release-notes.html#release-0-0-0

replacing the correct version numbers. For pre-release versions,
the URL should omit the pre-release suffix, e.g. "a1" or "rc1".
Expand Down
16 changes: 1 addition & 15 deletions docs/release-notes.rst
Original file line numberDiff line numberDiff line change
@@ -1,22 +1,8 @@
Release notes
=============

Unreleased
----------
.. towncrier release notes start

Bug fixes
~~~~~~~~~

* Backwards compatibility for Zarr format 2 structured arrays (:issue:`2134`)

Features
~~~~~~~~

Documentation
~~~~~~~~~~~~~

Other
~~~~~

3.0.1 (Jan. 17, 2025)
---------------------
Expand Down
10 changes: 10 additions & 0 deletions pyproject.toml
Original file line numberDiff line numberDiff line change
Expand Up@@ -85,6 +85,7 @@ test = [
]
optional = ["rich", "universal-pathlib"]
docs = [
# Doc building
'sphinx==8.1.3',
'sphinx-autobuild>=2021.3.14',
'sphinx-autoapi==3.4.0',
Expand All@@ -94,6 +95,9 @@ docs = [
'sphinx-reredirects',
'pydata-sphinx-theme',
'numpydoc',
# Changelog generation
'towncrier',
# Optional dependencies to run examples
'numcodecs[msgpack]',
'rich',
's3fs',
Expand DownExpand Up@@ -415,3 +419,9 @@ checks = [
"PR05",
"PR06",
]

[tool.towncrier]
directory = 'changes'
filename = "docs/release-notes.rst"
underlines = ["-", "~", "^"]
issue_format = ":issue:`{issue}`"
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Universal Dark Mode - works on any site\n(function() {\n var enabled = true;\n \n function applyDarkMode() {\n if (!enabled) return;\n \n // Create style element if it doesn't exist\n var style = document.getElementById('universal-dark-mode-style');\n if (!style) {\n style = document.createElement('style');\n style.id = 'universal-dark-mode-style';\n document.head.appendChild(style);\n }\n \n // Dark mode CSS - inverts colors but preserves images/video\n style.textContent = '\n /* Invert everything except media */\n html {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #1a1a2e !important;\n }\n \n /* Restore images, videos, iframes, canvas */\n img, video, iframe, canvas, svg, picture, [style*=\"background-image\"] {\n filter: invert(1) hue-rotate(180deg) !important;\n }\n \n /* Preserve specific elements that should not be inverted */\n .no-dark-mode, .no-dark-mode *,\n [data-theme=\"light\"], [data-theme=\"light\"],\n .ace_editor, .ace_editor *,\n .CodeMirror, .CodeMirror *,\n .monaco-editor, .monaco-editor *,\n .markdown-body pre, .markdown-body pre *,\n .highlight, .highlight *,\n pre code, pre code * {\n filter: none !important;\n }\n \n /* Fix common UI elements */\n .modal, .popup, .dropdown-menu, .tooltip, .popover {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #2d2d44 !important;\n border-color: #444 !important;\n }\n \n /* Scrollbars */\n ::-webkit-scrollbar { background: #1a1a2e !important; }\n ::-webkit-scrollbar-thumb { background: #444 !important; }\n ::-webkit-scrollbar-thumb:hover { background: #555 !important; }\n \n /* Selection */\n ::selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ';\n }\n \n function removeDarkMode() {\n var style = document.getElementById('universal-dark-mode-style');\n if (style) style.remove();\n }\n \n // Toggle with Alt+Shift+D\n document.addEventListener('keydown', function(e) {\n if (e.altKey && e.shiftKey && e.key === 'D') {\n e.preventDefault();\n enabled = !enabled;\n if (enabled) {\n applyDarkMode();\n console.log('[Universal Dark Mode] Enabled');\n } else {\n removeDarkMode();\n console.log('[Universal Dark Mode] Disabled');\n }\n }\n });\n \n // Apply on load\n applyDarkMode();\n \n // Re-apply on dynamic content\n var observer = new MutationObserver(function(mutations) {\n if (enabled && !document.getElementById('universal-dark-mode-style')) {\n applyDarkMode();\n }\n });\n observer.observe(document.head, { childList: true });\n \n console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');\n})();", "Universal Dark Mode"); } } catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); } })(); })();
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2 changes: 1 addition & 1 deletion .github/PULL_REQUEST_TEMPLATE.md
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,6 +4,6 @@ TODO:
* [ ] Add unit tests and/or doctests in docstrings
* [ ] Add docstrings and API docs for any new/modified user-facing classes and functions
* [ ] New/modified features documented in `docs/user-guide/*.rst`
* [ ] Changes documented in `docs/release-notes.rst`
* [ ] Changes documented as a new file in `changes/`
* [ ] GitHub Actions have all passed
* [ ] Test coverage is 100% (Codecov passes)
6 changes: 4 additions & 2 deletions .github/labeler.yml
Original file line numberDiff line numberDiff line change
@@ -1,2 +1,4 @@
needs release notes:
- all: ['!docs/release-notes.rst']
- needs release notes:
- all:
- changed-files:
- any-glob-to-any-file: 'changes/*.rst'
5 changes: 4 additions & 1 deletion .github/workflows/needs_release_notes.yml
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,8 +4,11 @@ on:
- pull_request_target

jobs:
triage:
labeler:
if: ${{ github.event.pull_request.user.login != 'dependabot[bot]' }} && ${{ github.event.pull_request.user.login != 'pre-commit-ci[bot]' }}
permissions:
contents: read
pull-requests: write
runs-on: ubuntu-latest
steps:
- uses: actions/labeler@8558fd74291d67161a8a78ce36a881fa63b766a9 # v5.0.0
Expand Down
4 changes: 4 additions & 0 deletions .pre-commit-config.yaml
Original file line numberDiff line numberDiff line change
Expand Up@@ -49,3 +49,7 @@ repos:
rev: v1.8.0
hooks:
- id: numpydoc-validation
- repo: https://github.com/twisted/towncrier
rev: 23.11.0
hooks:
- id: towncrier-check
7 changes: 7 additions & 0 deletions .readthedocs.yaml
Original file line numberDiff line numberDiff line change
Expand Up@@ -4,6 +4,13 @@ build:
os: ubuntu-22.04
tools:
python: "3.12"
jobs:
pre_build:
- |
if [ "$READTHEDOCS_VERSION_TYPE" != "tag" ];
then
towncrier build --version Unreleased --yes;
fi

sphinx:
configuration: docs/conf.py
Expand Down
1 change: 1 addition & 0 deletions changes/.gitignore
Original file line numberDiff line numberDiff line change
@@ -0,0 +1 @@
!.gitignore
1 change: 1 addition & 0 deletions changes/2681.bugfix.rst
Original file line numberDiff line numberDiff line change
@@ -0,0 +1 @@
Added backwards compatibility for Zarr format 2 structured arrays.
2 changes: 2 additions & 0 deletions changes/2736.doc.rst
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,2 @@
Changed the machinery for creating changelog entries.
Now individual entries should be added as files to the `changes` directory in the `zarr-python` repository, instead of directly to the changelog file.
14 changes: 14 additions & 0 deletions changes/README.md
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,14 @@
Writing a changelog entry
-------------------------

Please put a new file in this directory named `xxxx.<type>.rst`, where

- `xxxx` is the pull request number associated with this entry
- `<type>` is one of:
- feature
- bugfix
- doc
- removal
- misc

Inside the file, please write a short description of what you have changed, and how it impacts users of `zarr-python`.
14 changes: 6 additions & 8 deletions docs/developers/contributing.rst
Original file line numberDiff line numberDiff line change
Expand Up@@ -216,8 +216,8 @@ The documentation consists both of prose and API documentation. All user-facing
and functions are included in the API documentation, under the ``docs/api`` folder
using the `autodoc <https://www.sphinx-doc.org/en/master/usage/extensions/autodoc.html>`_
extension to sphinx. Any new features or important usage information should be included in the
user-guide (``docs/user-guide``). Any changes should also be included in the release
notes (``docs/release-notes.rst``).
user-guide (``docs/user-guide``). Any changes should also be included as a new file in the
:file:`changes` directory.

The documentation can be built locally by running::

Expand DownExpand Up@@ -335,11 +335,9 @@ Release procedure

Pre-release
"""""""""""
1. Make sure that all pull requests which will be
included in the release have been properly documented in
:file:`docs/release-notes.rst`.
2. Rename the "Unreleased" section heading in :file:`docs/release-notes.rst`
to the version you are about to release.
1. Make sure that all pull requests which will be included in the release
have been properly documented as changelog files in :file:`changes`.
Comment thread
d-v-b marked this conversation as resolved.
2. Run ``towncrier build --version x.y.z`` to create the changelog.

Releasing
"""""""""
Expand All@@ -352,7 +350,7 @@ appropriate suffix (e.g. `v0.0.0a1` or `v0.0.0rc2`).

Set the description of the release to::

See release notes https://zarr.readthedocs.io/en/stable/release.html#release-0-0-0
See release notes https://zarr.readthedocs.io/en/stable/release-notes.html#release-0-0-0

replacing the correct version numbers. For pre-release versions,
the URL should omit the pre-release suffix, e.g. "a1" or "rc1".
Expand Down
16 changes: 1 addition & 15 deletions docs/release-notes.rst
Original file line numberDiff line numberDiff line change
@@ -1,22 +1,8 @@
Release notes
=============

Unreleased
----------
.. towncrier release notes start

Bug fixes
~~~~~~~~~

* Backwards compatibility for Zarr format 2 structured arrays (:issue:`2134`)

Features
~~~~~~~~

Documentation
~~~~~~~~~~~~~

Other
~~~~~

3.0.1 (Jan. 17, 2025)
---------------------
Expand Down
10 changes: 10 additions & 0 deletions pyproject.toml
Original file line numberDiff line numberDiff line change
Expand Up@@ -85,6 +85,7 @@ test = [
]
optional = ["rich", "universal-pathlib"]
docs = [
# Doc building
'sphinx==8.1.3',
'sphinx-autobuild>=2021.3.14',
'sphinx-autoapi==3.4.0',
Expand All@@ -94,6 +95,9 @@ docs = [
'sphinx-reredirects',
'pydata-sphinx-theme',
'numpydoc',
# Changelog generation
'towncrier',
# Optional dependencies to run examples
'numcodecs[msgpack]',
'rich',
's3fs',
Expand DownExpand Up@@ -415,3 +419,9 @@ checks = [
"PR05",
"PR06",
]

[tool.towncrier]
directory = 'changes'
filename = "docs/release-notes.rst"
underlines = ["-", "~", "^"]
issue_format = ":issue:`{issue}`"