Bump numpy from 1.20.3 to 1.21.0 by dependabot[bot] · Pull Request #788 · zarr-developers/zarr-python

dependabot · 2021-06-23T04:22:54Z

Bumps numpy from 1.20.3 to 1.21.0.

Release notes

v1.21.0
NumPy 1.21.0 Release Notes
The NumPy 1.21.0 release highlights are
continued SIMD work covering more functions and platforms,
initial work on the new dtype infrastructure and casting,
universal2 wheels for Python 3.8 and Python 3.9 on Mac,
improved documentation,
improved annotations,
new PCG64DXSM bitgenerator for random numbers.
In addition there are the usual large number of bug fixes and other improvements.
The Python versions supported for this release are 3.7-3.9. Official support for Python 3.10 will be added when it is released.
⚠️ Warning: there are unresolved problems compiling NumPy 1.21.0 with gcc-11.1 .
Optimization level -O3 results in many wrong warnings when running the tests.
On some hardware NumPy will hang in an infinite loop.
New functions
Add PCG64DXSM BitGenerator
Uses of the PCG64 BitGenerator in a massively-parallel context have been shown to have statistical weaknesses that were not apparent at the first release in numpy 1.17. Most users will never observe this weakness and are safe to continue to use PCG64. We have introduced a new PCG64DXSM BitGenerator that will eventually become the new default BitGenerator implementation used by default_rng in future releases. PCG64DXSM solves the statistical weakness while preserving the performance and the features of PCG64.
See upgrading-pcg64 for more details.
(gh-18906)
Expired deprecations
The shape argument numpy.unravel_index cannot be passed as dims keyword argument anymore. (Was deprecated in NumPy 1.16.)

... (truncated)

Commits

b235f9e Merge pull request #19283 from charris/prepare-1.21.0-release
34aebc2 MAINT: Update 1.21.0-notes.rst
493b64b MAINT: Update 1.21.0-changelog.rst
07d7e72 MAINT: Remove accidentally created directory.
032fca5 Merge pull request #19280 from charris/backport-19277
7d25b81 BUG: Fix refcount leak in ResultType
fa5754e BUG: Add missing DECREF in new path
61127bb Merge pull request #19268 from charris/backport-19264
143d45f Merge pull request #19269 from charris/backport-19228
d80e473 BUG: Removed typing for == and != in dtypes
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Bumps [numpy](https://github.com/numpy/numpy) from 1.20.3 to 1.21.0. - [Release notes](https://github.com/numpy/numpy/releases) - [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst.txt) - [Commits](numpy/numpy@v1.20.3...v1.21.0) --- updated-dependencies: - dependency-name: numpy dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com>

joshmoore · 2021-06-23T07:21:26Z

grrr.... The Windows build has started failing across all new PRs (also #786 #787)

`1295 Segmentation fault pytest`

zarr\tests\test_convenience.py ......................................... [ 2%]
18
................................. [ 3%]
19
Windows fatal exception: access violation
20
21
Current thread 0x00001abc (most recent call first):
22
File "c:\miniconda\envs\zarr-env\lib\site-packages\numpy\core\_internal.py", line 490 in _view_is_safe
23
File "D:\a\zarr-python\zarr-python\zarr\util.py", line 277 in normalize_fill_value
24
File "D:\a\zarr-python\zarr-python\zarr\storage.py", line 393 in _init_array_metadata
25
File "D:\a\zarr-python\zarr-python\zarr\storage.py", line 352 in init_array
26
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 88 in create_array
27
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 1024 in check_structured_array
28
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 1086 in test_structured_array_nested
29
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 633 in _callTestMethod
30
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 676 in run
31
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 736 in __call__
32
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\unittest.py", line 321 in runtest
33
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 162 in pytest_runtest_call
34
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
35
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
36
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
37
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
38
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 255 in <lambda>
39
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 311 in from_call
40
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 254 in call_runtest_hook
41
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 215 in call_and_report
42
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 126 in runtestprotocol
43
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 109 in pytest_runtest_protocol
44
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
45
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
46
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
47
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
48
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 348 in pytest_runtestloop
49
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
50
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
51
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
52
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
53
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 323 in _main
54
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 269 in wrap_session
55
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 316 in pytest_cmdline_main
56
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
57
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
58
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
59
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
60
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\config\__init__.py", line 162 in main
61
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\config\__init__.py", line 185 in console_main
62
File "C:\Miniconda\envs\zarr-env\Scripts\pytest.exe\__main__.py", line 7 in <module>
63
File "c:\miniconda\envs\zarr-env\lib\runpy.py", line 85 in _run_code
64
File "c:\miniconda\envs\zarr-env\lib\runpy.py", line 192 in _run_module_as_main
65
D:\a\_temp\886387c4-8176-4347-9faf-41846fbfce5c.sh: line 4: 1295 Segmentation fault pytest
66
Error: Process completed with exit code 139.

dependabot · 2021-06-24T15:14:08Z

Looks like numpy is no longer updatable, so this is no longer needed.

dependabot · 2021-06-23T04:22:54Z

Bumps numpy from 1.20.3 to 1.21.0.

Release notes

Sourced from numpy's releases.

v1.21.0
NumPy 1.21.0 Release Notes
The NumPy 1.21.0 release highlights are
continued SIMD work covering more functions and platforms,
initial work on the new dtype infrastructure and casting,
universal2 wheels for Python 3.8 and Python 3.9 on Mac,
improved documentation,
improved annotations,
new PCG64DXSM bitgenerator for random numbers.
In addition there are the usual large number of bug fixes and other improvements.
The Python versions supported for this release are 3.7-3.9. Official support for Python 3.10 will be added when it is released.
⚠️ Warning: there are unresolved problems compiling NumPy 1.21.0 with gcc-11.1 .
Optimization level -O3 results in many wrong warnings when running the tests.
On some hardware NumPy will hang in an infinite loop.
New functions
Add PCG64DXSM BitGenerator
Uses of the PCG64 BitGenerator in a massively-parallel context have been shown to have statistical weaknesses that were not apparent at the first release in numpy 1.17. Most users will never observe this weakness and are safe to continue to use PCG64. We have introduced a new PCG64DXSM BitGenerator that will eventually become the new default BitGenerator implementation used by default_rng in future releases. PCG64DXSM solves the statistical weakness while preserving the performance and the features of PCG64.
See upgrading-pcg64 for more details.
(gh-18906)
Expired deprecations
The shape argument numpy.unravel_index cannot be passed as dims keyword argument anymore. (Was deprecated in NumPy 1.16.)

... (truncated)

Commits

b235f9e Merge pull request #19283 from charris/prepare-1.21.0-release
34aebc2 MAINT: Update 1.21.0-notes.rst
493b64b MAINT: Update 1.21.0-changelog.rst
07d7e72 MAINT: Remove accidentally created directory.
032fca5 Merge pull request #19280 from charris/backport-19277
7d25b81 BUG: Fix refcount leak in ResultType
fa5754e BUG: Add missing DECREF in new path
61127bb Merge pull request #19268 from charris/backport-19264
143d45f Merge pull request #19269 from charris/backport-19228
d80e473 BUG: Removed typing for == and != in dtypes
Additional commits viewable in compare view

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.

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Bumps [numpy](https://github.com/numpy/numpy) from 1.20.3 to 1.21.0. - [Release notes](https://github.com/numpy/numpy/releases) - [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst.txt) - [Commits](numpy/numpy@v1.20.3...v1.21.0) --- updated-dependencies: - dependency-name: numpy dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com>

joshmoore · 2021-06-23T07:21:26Z

grrr.... The Windows build has started failing across all new PRs (also #786 #787)

`1295 Segmentation fault pytest`

zarr\tests\test_convenience.py ......................................... [ 2%]
18
................................. [ 3%]
19
Windows fatal exception: access violation
20
21
Current thread 0x00001abc (most recent call first):
22
File "c:\miniconda\envs\zarr-env\lib\site-packages\numpy\core\_internal.py", line 490 in _view_is_safe
23
File "D:\a\zarr-python\zarr-python\zarr\util.py", line 277 in normalize_fill_value
24
File "D:\a\zarr-python\zarr-python\zarr\storage.py", line 393 in _init_array_metadata
25
File "D:\a\zarr-python\zarr-python\zarr\storage.py", line 352 in init_array
26
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 88 in create_array
27
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 1024 in check_structured_array
28
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 1086 in test_structured_array_nested
29
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 633 in _callTestMethod
30
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 676 in run
31
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 736 in __call__
32
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\unittest.py", line 321 in runtest
33
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 162 in pytest_runtest_call
34
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
35
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
36
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
37
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
38
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 255 in <lambda>
39
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 311 in from_call
40
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 254 in call_runtest_hook
41
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 215 in call_and_report
42
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 126 in runtestprotocol
43
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 109 in pytest_runtest_protocol
44
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
45
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
46
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
47
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
48
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 348 in pytest_runtestloop
49
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
50
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
51
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
52
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
53
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 323 in _main
54
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 269 in wrap_session
55
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 316 in pytest_cmdline_main
56
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
57
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
58
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
59
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
60
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\config\__init__.py", line 162 in main
61
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\config\__init__.py", line 185 in console_main
62
File "C:\Miniconda\envs\zarr-env\Scripts\pytest.exe\__main__.py", line 7 in <module>
63
File "c:\miniconda\envs\zarr-env\lib\runpy.py", line 85 in _run_code
64
File "c:\miniconda\envs\zarr-env\lib\runpy.py", line 192 in _run_module_as_main
65
D:\a\_temp\886387c4-8176-4347-9faf-41846fbfce5c.sh: line 4: 1295 Segmentation fault pytest
66
Error: Process completed with exit code 139.

dependabot · 2021-06-24T15:14:08Z

Looks like numpy is no longer updatable, so this is no longer needed.

dependabot · 2021-06-23T04:22:54Z

Bumps numpy from 1.20.3 to 1.21.0.

Release notes

Sourced from numpy's releases.

v1.21.0
NumPy 1.21.0 Release Notes
The NumPy 1.21.0 release highlights are
continued SIMD work covering more functions and platforms,
initial work on the new dtype infrastructure and casting,
universal2 wheels for Python 3.8 and Python 3.9 on Mac,
improved documentation,
improved annotations,
new PCG64DXSM bitgenerator for random numbers.
In addition there are the usual large number of bug fixes and other improvements.
The Python versions supported for this release are 3.7-3.9. Official support for Python 3.10 will be added when it is released.
⚠️ Warning: there are unresolved problems compiling NumPy 1.21.0 with gcc-11.1 .
Optimization level -O3 results in many wrong warnings when running the tests.
On some hardware NumPy will hang in an infinite loop.
New functions
Add PCG64DXSM BitGenerator
Uses of the PCG64 BitGenerator in a massively-parallel context have been shown to have statistical weaknesses that were not apparent at the first release in numpy 1.17. Most users will never observe this weakness and are safe to continue to use PCG64. We have introduced a new PCG64DXSM BitGenerator that will eventually become the new default BitGenerator implementation used by default_rng in future releases. PCG64DXSM solves the statistical weakness while preserving the performance and the features of PCG64.
See upgrading-pcg64 for more details.
(gh-18906)
Expired deprecations
The shape argument numpy.unravel_index cannot be passed as dims keyword argument anymore. (Was deprecated in NumPy 1.16.)

... (truncated)

Commits

b235f9e Merge pull request #19283 from charris/prepare-1.21.0-release
34aebc2 MAINT: Update 1.21.0-notes.rst
493b64b MAINT: Update 1.21.0-changelog.rst
07d7e72 MAINT: Remove accidentally created directory.
032fca5 Merge pull request #19280 from charris/backport-19277
7d25b81 BUG: Fix refcount leak in ResultType
fa5754e BUG: Add missing DECREF in new path
61127bb Merge pull request #19268 from charris/backport-19264
143d45f Merge pull request #19269 from charris/backport-19228
d80e473 BUG: Removed typing for == and != in dtypes
Additional commits viewable in compare view

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.

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@dependabot rebase will rebase this PR
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@dependabot reopen will reopen this PR if it is closed
@dependabot close will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually
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@dependabot ignore this dependency will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)

Bumps [numpy](https://github.com/numpy/numpy) from 1.20.3 to 1.21.0. - [Release notes](https://github.com/numpy/numpy/releases) - [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst.txt) - [Commits](numpy/numpy@v1.20.3...v1.21.0) --- updated-dependencies: - dependency-name: numpy dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com>

joshmoore · 2021-06-23T07:21:26Z

grrr.... The Windows build has started failing across all new PRs (also #786 #787)

`1295 Segmentation fault pytest`

zarr\tests\test_convenience.py ......................................... [ 2%]
18
................................. [ 3%]
19
Windows fatal exception: access violation
20
21
Current thread 0x00001abc (most recent call first):
22
File "c:\miniconda\envs\zarr-env\lib\site-packages\numpy\core\_internal.py", line 490 in _view_is_safe
23
File "D:\a\zarr-python\zarr-python\zarr\util.py", line 277 in normalize_fill_value
24
File "D:\a\zarr-python\zarr-python\zarr\storage.py", line 393 in _init_array_metadata
25
File "D:\a\zarr-python\zarr-python\zarr\storage.py", line 352 in init_array
26
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 88 in create_array
27
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 1024 in check_structured_array
28
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 1086 in test_structured_array_nested
29
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 633 in _callTestMethod
30
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 676 in run
31
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 736 in __call__
32
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\unittest.py", line 321 in runtest
33
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 162 in pytest_runtest_call
34
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
35
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
36
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
37
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
38
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 255 in <lambda>
39
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 311 in from_call
40
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 254 in call_runtest_hook
41
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 215 in call_and_report
42
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 126 in runtestprotocol
43
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 109 in pytest_runtest_protocol
44
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
45
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
46
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
47
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
48
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 348 in pytest_runtestloop
49
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
50
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
51
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
52
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
53
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 323 in _main
54
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 269 in wrap_session
55
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 316 in pytest_cmdline_main
56
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
57
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
58
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
59
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
60
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\config\__init__.py", line 162 in main
61
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\config\__init__.py", line 185 in console_main
62
File "C:\Miniconda\envs\zarr-env\Scripts\pytest.exe\__main__.py", line 7 in <module>
63
File "c:\miniconda\envs\zarr-env\lib\runpy.py", line 85 in _run_code
64
File "c:\miniconda\envs\zarr-env\lib\runpy.py", line 192 in _run_module_as_main
65
D:\a\_temp\886387c4-8176-4347-9faf-41846fbfce5c.sh: line 4: 1295 Segmentation fault pytest
66
Error: Process completed with exit code 139.

dependabot · 2021-06-24T15:14:08Z

Looks like numpy is no longer updatable, so this is no longer needed.

dependabot · 2021-06-23T04:22:54Z

Bumps numpy from 1.20.3 to 1.21.0.

Release notes

Sourced from numpy's releases.

v1.21.0
NumPy 1.21.0 Release Notes
The NumPy 1.21.0 release highlights are
continued SIMD work covering more functions and platforms,
initial work on the new dtype infrastructure and casting,
universal2 wheels for Python 3.8 and Python 3.9 on Mac,
improved documentation,
improved annotations,
new PCG64DXSM bitgenerator for random numbers.
In addition there are the usual large number of bug fixes and other improvements.
The Python versions supported for this release are 3.7-3.9. Official support for Python 3.10 will be added when it is released.
⚠️ Warning: there are unresolved problems compiling NumPy 1.21.0 with gcc-11.1 .
Optimization level -O3 results in many wrong warnings when running the tests.
On some hardware NumPy will hang in an infinite loop.
New functions
Add PCG64DXSM BitGenerator
Uses of the PCG64 BitGenerator in a massively-parallel context have been shown to have statistical weaknesses that were not apparent at the first release in numpy 1.17. Most users will never observe this weakness and are safe to continue to use PCG64. We have introduced a new PCG64DXSM BitGenerator that will eventually become the new default BitGenerator implementation used by default_rng in future releases. PCG64DXSM solves the statistical weakness while preserving the performance and the features of PCG64.
See upgrading-pcg64 for more details.
(gh-18906)
Expired deprecations
The shape argument numpy.unravel_index cannot be passed as dims keyword argument anymore. (Was deprecated in NumPy 1.16.)

... (truncated)

Commits

b235f9e Merge pull request #19283 from charris/prepare-1.21.0-release
34aebc2 MAINT: Update 1.21.0-notes.rst
493b64b MAINT: Update 1.21.0-changelog.rst
07d7e72 MAINT: Remove accidentally created directory.
032fca5 Merge pull request #19280 from charris/backport-19277
7d25b81 BUG: Fix refcount leak in ResultType
fa5754e BUG: Add missing DECREF in new path
61127bb Merge pull request #19268 from charris/backport-19264
143d45f Merge pull request #19269 from charris/backport-19228
d80e473 BUG: Removed typing for == and != in dtypes
Additional commits viewable in compare view

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.

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Bumps [numpy](https://github.com/numpy/numpy) from 1.20.3 to 1.21.0. - [Release notes](https://github.com/numpy/numpy/releases) - [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst.txt) - [Commits](numpy/numpy@v1.20.3...v1.21.0) --- updated-dependencies: - dependency-name: numpy dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com>

joshmoore · 2021-06-23T07:21:26Z

grrr.... The Windows build has started failing across all new PRs (also #786 #787)

`1295 Segmentation fault pytest`

zarr\tests\test_convenience.py ......................................... [ 2%]
18
................................. [ 3%]
19
Windows fatal exception: access violation
20
21
Current thread 0x00001abc (most recent call first):
22
File "c:\miniconda\envs\zarr-env\lib\site-packages\numpy\core\_internal.py", line 490 in _view_is_safe
23
File "D:\a\zarr-python\zarr-python\zarr\util.py", line 277 in normalize_fill_value
24
File "D:\a\zarr-python\zarr-python\zarr\storage.py", line 393 in _init_array_metadata
25
File "D:\a\zarr-python\zarr-python\zarr\storage.py", line 352 in init_array
26
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 88 in create_array
27
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 1024 in check_structured_array
28
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 1086 in test_structured_array_nested
29
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 633 in _callTestMethod
30
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 676 in run
31
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 736 in __call__
32
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\unittest.py", line 321 in runtest
33
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 162 in pytest_runtest_call
34
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
35
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
36
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
37
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
38
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 255 in <lambda>
39
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 311 in from_call
40
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 254 in call_runtest_hook
41
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 215 in call_and_report
42
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 126 in runtestprotocol
43
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 109 in pytest_runtest_protocol
44
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
45
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
46
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
47
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
48
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 348 in pytest_runtestloop
49
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
50
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
51
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
52
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
53
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 323 in _main
54
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 269 in wrap_session
55
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 316 in pytest_cmdline_main
56
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
57
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
58
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
59
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
60
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\config\__init__.py", line 162 in main
61
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\config\__init__.py", line 185 in console_main
62
File "C:\Miniconda\envs\zarr-env\Scripts\pytest.exe\__main__.py", line 7 in <module>
63
File "c:\miniconda\envs\zarr-env\lib\runpy.py", line 85 in _run_code
64
File "c:\miniconda\envs\zarr-env\lib\runpy.py", line 192 in _run_module_as_main
65
D:\a\_temp\886387c4-8176-4347-9faf-41846fbfce5c.sh: line 4: 1295 Segmentation fault pytest
66
Error: Process completed with exit code 139.

dependabot · 2021-06-24T15:14:08Z

Looks like numpy is no longer updatable, so this is no longer needed.

dependabot · 2021-06-23T04:22:54Z

Bumps numpy from 1.20.3 to 1.21.0.

Release notes

Sourced from numpy's releases.

v1.21.0
NumPy 1.21.0 Release Notes
The NumPy 1.21.0 release highlights are
continued SIMD work covering more functions and platforms,
initial work on the new dtype infrastructure and casting,
universal2 wheels for Python 3.8 and Python 3.9 on Mac,
improved documentation,
improved annotations,
new PCG64DXSM bitgenerator for random numbers.
In addition there are the usual large number of bug fixes and other improvements.
The Python versions supported for this release are 3.7-3.9. Official support for Python 3.10 will be added when it is released.
⚠️ Warning: there are unresolved problems compiling NumPy 1.21.0 with gcc-11.1 .
Optimization level -O3 results in many wrong warnings when running the tests.
On some hardware NumPy will hang in an infinite loop.
New functions
Add PCG64DXSM BitGenerator
Uses of the PCG64 BitGenerator in a massively-parallel context have been shown to have statistical weaknesses that were not apparent at the first release in numpy 1.17. Most users will never observe this weakness and are safe to continue to use PCG64. We have introduced a new PCG64DXSM BitGenerator that will eventually become the new default BitGenerator implementation used by default_rng in future releases. PCG64DXSM solves the statistical weakness while preserving the performance and the features of PCG64.
See upgrading-pcg64 for more details.
(gh-18906)
Expired deprecations
The shape argument numpy.unravel_index cannot be passed as dims keyword argument anymore. (Was deprecated in NumPy 1.16.)

... (truncated)

Commits

b235f9e Merge pull request #19283 from charris/prepare-1.21.0-release
34aebc2 MAINT: Update 1.21.0-notes.rst
493b64b MAINT: Update 1.21.0-changelog.rst
07d7e72 MAINT: Remove accidentally created directory.
032fca5 Merge pull request #19280 from charris/backport-19277
7d25b81 BUG: Fix refcount leak in ResultType
fa5754e BUG: Add missing DECREF in new path
61127bb Merge pull request #19268 from charris/backport-19264
143d45f Merge pull request #19269 from charris/backport-19228
d80e473 BUG: Removed typing for == and != in dtypes
Additional commits viewable in compare view

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.

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@dependabot rebase will rebase this PR
@dependabot recreate will recreate this PR, overwriting any edits that have been made to it
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@dependabot squash and merge will squash and merge this PR after your CI passes on it
@dependabot cancel merge will cancel a previously requested merge and block automerging
@dependabot reopen will reopen this PR if it is closed
@dependabot close will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually
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@dependabot ignore this dependency will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)

Bumps [numpy](https://github.com/numpy/numpy) from 1.20.3 to 1.21.0. - [Release notes](https://github.com/numpy/numpy/releases) - [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst.txt) - [Commits](numpy/numpy@v1.20.3...v1.21.0) --- updated-dependencies: - dependency-name: numpy dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com>

joshmoore · 2021-06-23T07:21:26Z

grrr.... The Windows build has started failing across all new PRs (also #786 #787)

`1295 Segmentation fault pytest`

zarr\tests\test_convenience.py ......................................... [ 2%]
18
................................. [ 3%]
19
Windows fatal exception: access violation
20
21
Current thread 0x00001abc (most recent call first):
22
File "c:\miniconda\envs\zarr-env\lib\site-packages\numpy\core\_internal.py", line 490 in _view_is_safe
23
File "D:\a\zarr-python\zarr-python\zarr\util.py", line 277 in normalize_fill_value
24
File "D:\a\zarr-python\zarr-python\zarr\storage.py", line 393 in _init_array_metadata
25
File "D:\a\zarr-python\zarr-python\zarr\storage.py", line 352 in init_array
26
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 88 in create_array
27
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 1024 in check_structured_array
28
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 1086 in test_structured_array_nested
29
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 633 in _callTestMethod
30
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 676 in run
31
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 736 in __call__
32
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\unittest.py", line 321 in runtest
33
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 162 in pytest_runtest_call
34
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
35
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
36
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
37
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
38
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 255 in <lambda>
39
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 311 in from_call
40
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 254 in call_runtest_hook
41
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 215 in call_and_report
42
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 126 in runtestprotocol
43
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 109 in pytest_runtest_protocol
44
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
45
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
46
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
47
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
48
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 348 in pytest_runtestloop
49
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
50
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
51
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
52
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
53
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 323 in _main
54
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 269 in wrap_session
55
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 316 in pytest_cmdline_main
56
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
57
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
58
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
59
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
60
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\config\__init__.py", line 162 in main
61
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\config\__init__.py", line 185 in console_main
62
File "C:\Miniconda\envs\zarr-env\Scripts\pytest.exe\__main__.py", line 7 in <module>
63
File "c:\miniconda\envs\zarr-env\lib\runpy.py", line 85 in _run_code
64
File "c:\miniconda\envs\zarr-env\lib\runpy.py", line 192 in _run_module_as_main
65
D:\a\_temp\886387c4-8176-4347-9faf-41846fbfce5c.sh: line 4: 1295 Segmentation fault pytest
66
Error: Process completed with exit code 139.

dependabot · 2021-06-24T15:14:08Z

Looks like numpy is no longer updatable, so this is no longer needed.

dependabot · 2021-06-23T04:22:54Z

Bumps numpy from 1.20.3 to 1.21.0.

Release notes

Sourced from numpy's releases.

v1.21.0
NumPy 1.21.0 Release Notes
The NumPy 1.21.0 release highlights are
continued SIMD work covering more functions and platforms,
initial work on the new dtype infrastructure and casting,
universal2 wheels for Python 3.8 and Python 3.9 on Mac,
improved documentation,
improved annotations,
new PCG64DXSM bitgenerator for random numbers.
In addition there are the usual large number of bug fixes and other improvements.
The Python versions supported for this release are 3.7-3.9. Official support for Python 3.10 will be added when it is released.
⚠️ Warning: there are unresolved problems compiling NumPy 1.21.0 with gcc-11.1 .
Optimization level -O3 results in many wrong warnings when running the tests.
On some hardware NumPy will hang in an infinite loop.
New functions
Add PCG64DXSM BitGenerator
Uses of the PCG64 BitGenerator in a massively-parallel context have been shown to have statistical weaknesses that were not apparent at the first release in numpy 1.17. Most users will never observe this weakness and are safe to continue to use PCG64. We have introduced a new PCG64DXSM BitGenerator that will eventually become the new default BitGenerator implementation used by default_rng in future releases. PCG64DXSM solves the statistical weakness while preserving the performance and the features of PCG64.
See upgrading-pcg64 for more details.
(gh-18906)
Expired deprecations
The shape argument numpy.unravel_index cannot be passed as dims keyword argument anymore. (Was deprecated in NumPy 1.16.)

... (truncated)

Commits

b235f9e Merge pull request #19283 from charris/prepare-1.21.0-release
34aebc2 MAINT: Update 1.21.0-notes.rst
493b64b MAINT: Update 1.21.0-changelog.rst
07d7e72 MAINT: Remove accidentally created directory.
032fca5 Merge pull request #19280 from charris/backport-19277
7d25b81 BUG: Fix refcount leak in ResultType
fa5754e BUG: Add missing DECREF in new path
61127bb Merge pull request #19268 from charris/backport-19264
143d45f Merge pull request #19269 from charris/backport-19228
d80e473 BUG: Removed typing for == and != in dtypes
Additional commits viewable in compare view

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Bumps [numpy](https://github.com/numpy/numpy) from 1.20.3 to 1.21.0. - [Release notes](https://github.com/numpy/numpy/releases) - [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst.txt) - [Commits](numpy/numpy@v1.20.3...v1.21.0) --- updated-dependencies: - dependency-name: numpy dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com>

joshmoore · 2021-06-23T07:21:26Z

grrr.... The Windows build has started failing across all new PRs (also #786 #787)

`1295 Segmentation fault pytest`

zarr\tests\test_convenience.py ......................................... [ 2%]
18
................................. [ 3%]
19
Windows fatal exception: access violation
20
21
Current thread 0x00001abc (most recent call first):
22
File "c:\miniconda\envs\zarr-env\lib\site-packages\numpy\core\_internal.py", line 490 in _view_is_safe
23
File "D:\a\zarr-python\zarr-python\zarr\util.py", line 277 in normalize_fill_value
24
File "D:\a\zarr-python\zarr-python\zarr\storage.py", line 393 in _init_array_metadata
25
File "D:\a\zarr-python\zarr-python\zarr\storage.py", line 352 in init_array
26
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 88 in create_array
27
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 1024 in check_structured_array
28
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 1086 in test_structured_array_nested
29
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 633 in _callTestMethod
30
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 676 in run
31
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 736 in __call__
32
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\unittest.py", line 321 in runtest
33
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 162 in pytest_runtest_call
34
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
35
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
36
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
37
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
38
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 255 in <lambda>
39
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 311 in from_call
40
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 254 in call_runtest_hook
41
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 215 in call_and_report
42
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 126 in runtestprotocol
43
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 109 in pytest_runtest_protocol
44
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
45
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
46
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
47
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
48
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 348 in pytest_runtestloop
49
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
50
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
51
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
52
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
53
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 323 in _main
54
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 269 in wrap_session
55
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 316 in pytest_cmdline_main
56
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
57
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
58
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
59
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
60
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\config\__init__.py", line 162 in main
61
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\config\__init__.py", line 185 in console_main
62
File "C:\Miniconda\envs\zarr-env\Scripts\pytest.exe\__main__.py", line 7 in <module>
63
File "c:\miniconda\envs\zarr-env\lib\runpy.py", line 85 in _run_code
64
File "c:\miniconda\envs\zarr-env\lib\runpy.py", line 192 in _run_module_as_main
65
D:\a\_temp\886387c4-8176-4347-9faf-41846fbfce5c.sh: line 4: 1295 Segmentation fault pytest
66
Error: Process completed with exit code 139.

dependabot · 2021-06-24T15:14:08Z

Looks like numpy is no longer updatable, so this is no longer needed.

dependabot · 2021-06-23T04:22:54Z

Bumps numpy from 1.20.3 to 1.21.0.

Release notes

Sourced from numpy's releases.

v1.21.0
NumPy 1.21.0 Release Notes
The NumPy 1.21.0 release highlights are
continued SIMD work covering more functions and platforms,
initial work on the new dtype infrastructure and casting,
universal2 wheels for Python 3.8 and Python 3.9 on Mac,
improved documentation,
improved annotations,
new PCG64DXSM bitgenerator for random numbers.
In addition there are the usual large number of bug fixes and other improvements.
The Python versions supported for this release are 3.7-3.9. Official support for Python 3.10 will be added when it is released.
⚠️ Warning: there are unresolved problems compiling NumPy 1.21.0 with gcc-11.1 .
Optimization level -O3 results in many wrong warnings when running the tests.
On some hardware NumPy will hang in an infinite loop.
New functions
Add PCG64DXSM BitGenerator
Uses of the PCG64 BitGenerator in a massively-parallel context have been shown to have statistical weaknesses that were not apparent at the first release in numpy 1.17. Most users will never observe this weakness and are safe to continue to use PCG64. We have introduced a new PCG64DXSM BitGenerator that will eventually become the new default BitGenerator implementation used by default_rng in future releases. PCG64DXSM solves the statistical weakness while preserving the performance and the features of PCG64.
See upgrading-pcg64 for more details.
(gh-18906)
Expired deprecations
The shape argument numpy.unravel_index cannot be passed as dims keyword argument anymore. (Was deprecated in NumPy 1.16.)

... (truncated)

Commits

b235f9e Merge pull request #19283 from charris/prepare-1.21.0-release
34aebc2 MAINT: Update 1.21.0-notes.rst
493b64b MAINT: Update 1.21.0-changelog.rst
07d7e72 MAINT: Remove accidentally created directory.
032fca5 Merge pull request #19280 from charris/backport-19277
7d25b81 BUG: Fix refcount leak in ResultType
fa5754e BUG: Add missing DECREF in new path
61127bb Merge pull request #19268 from charris/backport-19264
143d45f Merge pull request #19269 from charris/backport-19228
d80e473 BUG: Removed typing for == and != in dtypes
Additional commits viewable in compare view

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.

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@dependabot rebase will rebase this PR
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@dependabot ignore this dependency will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)

Bumps [numpy](https://github.com/numpy/numpy) from 1.20.3 to 1.21.0. - [Release notes](https://github.com/numpy/numpy/releases) - [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst.txt) - [Commits](numpy/numpy@v1.20.3...v1.21.0) --- updated-dependencies: - dependency-name: numpy dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com>

joshmoore · 2021-06-23T07:21:26Z

grrr.... The Windows build has started failing across all new PRs (also #786 #787)

`1295 Segmentation fault pytest`

zarr\tests\test_convenience.py ......................................... [ 2%]
18
................................. [ 3%]
19
Windows fatal exception: access violation
20
21
Current thread 0x00001abc (most recent call first):
22
File "c:\miniconda\envs\zarr-env\lib\site-packages\numpy\core\_internal.py", line 490 in _view_is_safe
23
File "D:\a\zarr-python\zarr-python\zarr\util.py", line 277 in normalize_fill_value
24
File "D:\a\zarr-python\zarr-python\zarr\storage.py", line 393 in _init_array_metadata
25
File "D:\a\zarr-python\zarr-python\zarr\storage.py", line 352 in init_array
26
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 88 in create_array
27
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 1024 in check_structured_array
28
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 1086 in test_structured_array_nested
29
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 633 in _callTestMethod
30
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 676 in run
31
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 736 in __call__
32
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\unittest.py", line 321 in runtest
33
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 162 in pytest_runtest_call
34
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
35
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
36
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
37
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
38
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 255 in <lambda>
39
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 311 in from_call
40
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 254 in call_runtest_hook
41
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 215 in call_and_report
42
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 126 in runtestprotocol
43
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 109 in pytest_runtest_protocol
44
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
45
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
46
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
47
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
48
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 348 in pytest_runtestloop
49
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
50
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
51
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
52
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
53
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 323 in _main
54
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 269 in wrap_session
55
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 316 in pytest_cmdline_main
56
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
57
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
58
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
59
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
60
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\config\__init__.py", line 162 in main
61
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\config\__init__.py", line 185 in console_main
62
File "C:\Miniconda\envs\zarr-env\Scripts\pytest.exe\__main__.py", line 7 in <module>
63
File "c:\miniconda\envs\zarr-env\lib\runpy.py", line 85 in _run_code
64
File "c:\miniconda\envs\zarr-env\lib\runpy.py", line 192 in _run_module_as_main
65
D:\a\_temp\886387c4-8176-4347-9faf-41846fbfce5c.sh: line 4: 1295 Segmentation fault pytest
66
Error: Process completed with exit code 139.

dependabot · 2021-06-24T15:14:08Z

Looks like numpy is no longer updatable, so this is no longer needed.

dependabot · 2021-06-23T04:22:54Z

Bumps numpy from 1.20.3 to 1.21.0.

Release notes

Sourced from numpy's releases.

v1.21.0
NumPy 1.21.0 Release Notes
The NumPy 1.21.0 release highlights are
continued SIMD work covering more functions and platforms,
initial work on the new dtype infrastructure and casting,
universal2 wheels for Python 3.8 and Python 3.9 on Mac,
improved documentation,
improved annotations,
new PCG64DXSM bitgenerator for random numbers.
In addition there are the usual large number of bug fixes and other improvements.
The Python versions supported for this release are 3.7-3.9. Official support for Python 3.10 will be added when it is released.
⚠️ Warning: there are unresolved problems compiling NumPy 1.21.0 with gcc-11.1 .
Optimization level -O3 results in many wrong warnings when running the tests.
On some hardware NumPy will hang in an infinite loop.
New functions
Add PCG64DXSM BitGenerator
Uses of the PCG64 BitGenerator in a massively-parallel context have been shown to have statistical weaknesses that were not apparent at the first release in numpy 1.17. Most users will never observe this weakness and are safe to continue to use PCG64. We have introduced a new PCG64DXSM BitGenerator that will eventually become the new default BitGenerator implementation used by default_rng in future releases. PCG64DXSM solves the statistical weakness while preserving the performance and the features of PCG64.
See upgrading-pcg64 for more details.
(gh-18906)
Expired deprecations
The shape argument numpy.unravel_index cannot be passed as dims keyword argument anymore. (Was deprecated in NumPy 1.16.)

... (truncated)

Commits

b235f9e Merge pull request #19283 from charris/prepare-1.21.0-release
34aebc2 MAINT: Update 1.21.0-notes.rst
493b64b MAINT: Update 1.21.0-changelog.rst
07d7e72 MAINT: Remove accidentally created directory.
032fca5 Merge pull request #19280 from charris/backport-19277
7d25b81 BUG: Fix refcount leak in ResultType
fa5754e BUG: Add missing DECREF in new path
61127bb Merge pull request #19268 from charris/backport-19264
143d45f Merge pull request #19269 from charris/backport-19228
d80e473 BUG: Removed typing for == and != in dtypes
Additional commits viewable in compare view

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.

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@dependabot rebase will rebase this PR
@dependabot recreate will recreate this PR, overwriting any edits that have been made to it
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@dependabot squash and merge will squash and merge this PR after your CI passes on it
@dependabot cancel merge will cancel a previously requested merge and block automerging
@dependabot reopen will reopen this PR if it is closed
@dependabot close will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually
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@dependabot ignore this dependency will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)

Bumps [numpy](https://github.com/numpy/numpy) from 1.20.3 to 1.21.0. - [Release notes](https://github.com/numpy/numpy/releases) - [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst.txt) - [Commits](numpy/numpy@v1.20.3...v1.21.0) --- updated-dependencies: - dependency-name: numpy dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com>

joshmoore · 2021-06-23T07:21:26Z

grrr.... The Windows build has started failing across all new PRs (also #786 #787)

`1295 Segmentation fault pytest`

zarr\tests\test_convenience.py ......................................... [ 2%]
18
................................. [ 3%]
19
Windows fatal exception: access violation
20
21
Current thread 0x00001abc (most recent call first):
22
File "c:\miniconda\envs\zarr-env\lib\site-packages\numpy\core\_internal.py", line 490 in _view_is_safe
23
File "D:\a\zarr-python\zarr-python\zarr\util.py", line 277 in normalize_fill_value
24
File "D:\a\zarr-python\zarr-python\zarr\storage.py", line 393 in _init_array_metadata
25
File "D:\a\zarr-python\zarr-python\zarr\storage.py", line 352 in init_array
26
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 88 in create_array
27
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 1024 in check_structured_array
28
File "D:\a\zarr-python\zarr-python\zarr\tests\test_core.py", line 1086 in test_structured_array_nested
29
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 633 in _callTestMethod
30
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 676 in run
31
File "c:\miniconda\envs\zarr-env\lib\unittest\case.py", line 736 in __call__
32
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\unittest.py", line 321 in runtest
33
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 162 in pytest_runtest_call
34
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
35
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
36
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
37
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
38
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 255 in <lambda>
39
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 311 in from_call
40
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 254 in call_runtest_hook
41
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 215 in call_and_report
42
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 126 in runtestprotocol
43
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\runner.py", line 109 in pytest_runtest_protocol
44
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
45
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
46
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
47
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
48
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 348 in pytest_runtestloop
49
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
50
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
51
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
52
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
53
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 323 in _main
54
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 269 in wrap_session
55
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\main.py", line 316 in pytest_cmdline_main
56
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\callers.py", line 187 in _multicall
57
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 84 in <lambda>
58
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\manager.py", line 93 in _hookexec
59
File "c:\miniconda\envs\zarr-env\lib\site-packages\pluggy\hooks.py", line 286 in __call__
60
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\config\__init__.py", line 162 in main
61
File "c:\miniconda\envs\zarr-env\lib\site-packages\_pytest\config\__init__.py", line 185 in console_main
62
File "C:\Miniconda\envs\zarr-env\Scripts\pytest.exe\__main__.py", line 7 in <module>
63
File "c:\miniconda\envs\zarr-env\lib\runpy.py", line 85 in _run_code
64
File "c:\miniconda\envs\zarr-env\lib\runpy.py", line 192 in _run_module_as_main
65
D:\a\_temp\886387c4-8176-4347-9faf-41846fbfce5c.sh: line 4: 1295 Segmentation fault pytest
66
Error: Process completed with exit code 139.

dependabot · 2021-06-24T15:14:08Z

Looks like numpy is no longer updatable, so this is no longer needed.

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v1.21.0

NumPy 1.21.0 Release Notes

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