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  1. DeepRUOTDeepRUOTPublic

    Learning stochastic dynamics from snapshots through regularized unbalanced optimal transport (ICLR'25 oral)

    Jupyter Notebook 35 3

  2. DeepRUOTv2DeepRUOTv2Public

    DeepRUOTv2 (Dynamical Optimal Transport Tools)

    Jupyter Notebook 22 2

  3. CytoBridgeCytoBridgePublic

    A Toolkit for Single Cell Spatiotemporal Dynamical Generative Modeling

    Jupyter Notebook 17 1

  4. CytoBridge-NeurIPSCytoBridge-NeurIPSPublic

    Modeling Cell Dynamics and Interactions with Unbalanced Mean Field Schrödinger Bridge (NeurIPS 2025)

    Python 9 2