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1. Deep-MI/FastSurferDeep-MI/FastSurferPublic

   PyTorch implementation of FastSurferCNN

   Python 626 155

2. Deep-MI/neurolitDeep-MI/neurolitPublic

   Neuro Lesion Inpainting Tool (neuroLIT / FastSurfer-LIT) for lesion inpainting e.g. for whole brain segmentation and cortical surface reconstruction in the presence of tumor, surgical cavities or o…

   Python 22 5

3. Deep-MI/head-motion-from-MRIDeep-MI/head-motion-from-MRIPublic

   Code for the paper "Estimating Head Motion from MRI", which predicts motion scores directly from MRI images.

   Python 4 2

4. Deep-MI/head-motion-toolsDeep-MI/head-motion-toolsPublic

   Python 2

5. How to run freesurfer inside a pytho...How to run freesurfer inside a python script

   1

   importshlex

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   importsubprocess

   3

   importsys

   4

   defwhich(program):

   5

   defis_exe(fpath):

6. launch_processes.pylaunch_processes.py

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   importargparse

   2

   importsubprocess

   3

   importtime

   4

   importsys

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   importselect