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aplowmanand others added 30 commits June 1, 2023 11:30
feat: use DefDAP to compute CIPHERGeometry.misorientation_matrix - mu…
fix: more reasonable time in notebook examples
feat: allow not loading mapping files in CIPHEROutput.parse
fix: now no need to load CIPHERInput object in CIPHEROutput.get_incremental_data
feat: add to/from_zarr (without `CIPHERGeometry` support for now)
fix: use pyvista to resample VTU files onto a grid instead of a Paraview batch script
aplowmanand others added 30 commits July 10, 2025 17:38
This had been returning a np.array of None values,
which MatFlow wasn't able to serialise.
Python 3.8 gave errors trying to install some of the dependencies
3.13 gave an error that it wasn't supported by the project.
Ubuntu tests were failing - everything else passed.
…happen in the unrealistically small examples in the tests)
…s-version
Upgrade GitHub Actions to version 4 for artifacts
Update versions for all actions to latest
Make minor typo fix to force rerun of github workflows
Update comments in release workflow for clarity
Added permissions for write access to contents.
Add write permissions to contents in release workflow
Update release workflow permissions and conditions
…ase-workflow-to-use-latest-actions
Try an older version of the checkout action
…ase-workflow-to-use-latest-actions
Use workflow from PR branch
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@aplowman@lightform-bot@gcapes
, 'i'); if (__m === '*' || __re.test(location.href)) { // Add copy buttons to all
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function addCopyButtons() {
document.querySelectorAll('pre code').forEach(function(codeBlock) {
if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;
codeBlock.parentElement.setAttribute('data-copy-added', 'true');
var btn = document.createElement('button');
btn.textContent = 'Copy';
btn.style.cssText = 'position:absolute;top:4px;right:4px;padding:2px 8px;font-size:11px;background:#4ecdc4;border:none;border-radius:4px;color:#1a1a2e;cursor:pointer;opacity:0.7;transition:opacity 0.2s;';
btn.onmouseover = function() { this.style.opacity = '1'; };
btn.onmouseout = function() { this.style.opacity = '0.7'; };
btn.onclick = function() {
navigator.clipboard.writeText(codeBlock.textContent).then(function() {
btn.textContent = 'Copied!';
setTimeout(function() { btn.textContent = 'Copy'; }, 1500);
});
};
codeBlock.parentElement.style.position = 'relative';
codeBlock.parentElement.appendChild(btn);
});
}
addCopyButtons();
// Re-run on dynamic content
var observer = new MutationObserver(addCopyButtons);
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '
Develop by aplowman · Pull Request #43 · LightForm-group/cipher-parse · GitHub
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Develop - #43

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aplowman wants to merge 66 commits into
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develop
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Develop#43
aplowman wants to merge 66 commits into
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aplowmanand others added 30 commits June 1, 2023 11:30
feat: use DefDAP to compute CIPHERGeometry.misorientation_matrix - mu…
fix: more reasonable time in notebook examples
feat: allow not loading mapping files in CIPHEROutput.parse
fix: now no need to load CIPHERInput object in CIPHEROutput.get_incremental_data
feat: add to/from_zarr (without `CIPHERGeometry` support for now)
fix: use pyvista to resample VTU files onto a grid instead of a Paraview batch script
aplowmanand others added 30 commits July 10, 2025 17:38
This had been returning a np.array of None values,
which MatFlow wasn't able to serialise.
Python 3.8 gave errors trying to install some of the dependencies
3.13 gave an error that it wasn't supported by the project.
Ubuntu tests were failing - everything else passed.
…happen in the unrealistically small examples in the tests)
…s-version
Upgrade GitHub Actions to version 4 for artifacts
Update versions for all actions to latest
Make minor typo fix to force rerun of github workflows
Update comments in release workflow for clarity
Added permissions for write access to contents.
Add write permissions to contents in release workflow
Update release workflow permissions and conditions
…ase-workflow-to-use-latest-actions
Try an older version of the checkout action
…ase-workflow-to-use-latest-actions
Use workflow from PR branch
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@aplowman@lightform-bot@gcapes
, 'i'); if (__m === '*' || __re.test(location.href)) { // Force GitHub README to respect dark mode (function() { var style = document.createElement('style'); style.textContent = ' .markdown-body { color-scheme: dark light; } .markdown-body pre { background: #161b22 !important; } .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; } .markdown-body table th, .markdown-body table td { border-color: #30363d !important; } .markdown-body img { background: #0d1117; } .markdown-body blockquote { border-left-color: #8b949e; } .markdown-body hr { border-color: #30363d; } '; document.head.appendChild(style); })(); } } catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + ' Develop by aplowman · Pull Request #43 · LightForm-group/cipher-parse · GitHub
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Develop - #43

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aplowman wants to merge 66 commits into
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Develop#43
aplowman wants to merge 66 commits into
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develop

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aplowmanand others added 30 commits June 1, 2023 11:30
feat: use DefDAP to compute CIPHERGeometry.misorientation_matrix - mu…
fix: more reasonable time in notebook examples
feat: allow not loading mapping files in CIPHEROutput.parse
fix: now no need to load CIPHERInput object in CIPHEROutput.get_incremental_data
feat: add to/from_zarr (without `CIPHERGeometry` support for now)
fix: use pyvista to resample VTU files onto a grid instead of a Paraview batch script
aplowmanand others added 30 commits July 10, 2025 17:38
This had been returning a np.array of None values,
which MatFlow wasn't able to serialise.
Python 3.8 gave errors trying to install some of the dependencies
3.13 gave an error that it wasn't supported by the project.
Ubuntu tests were failing - everything else passed.
…happen in the unrealistically small examples in the tests)
…s-version
Upgrade GitHub Actions to version 4 for artifacts
Update versions for all actions to latest
Make minor typo fix to force rerun of github workflows
Update comments in release workflow for clarity
Added permissions for write access to contents.
Add write permissions to contents in release workflow
Update release workflow permissions and conditions
…ase-workflow-to-use-latest-actions
Try an older version of the checkout action
…ase-workflow-to-use-latest-actions
Use workflow from PR branch
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@aplowman@lightform-bot@gcapes
, 'i'); if (__m === '*' || __re.test(location.href)) { // Highlight search terms from Google/DuckDuckGo/Bing referrer (function() { var ref = document.referrer; var terms = []; if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) { var url = new URL(ref); var q = url.searchParams.get('q') || url.searchParams.get('p'); if (q) { terms = q.split(/\s+/).filter(function(t) { return t.length > 2; }); } } if (terms.length === 0) return; var style = document.createElement('style'); style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }'; document.head.appendChild(style); function highlight(node) { if (node.nodeType === 3) { // text node var text = node.textContent; var found = false; terms.forEach(function(term) { var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\]\\]/g, '\\') + ')', 'gi'); if (regex.test(text)) { found = true; var frag = document.createDocumentFragment(); var parts = text.split(regex); parts.forEach(function(part, i) { if (i % 2 === 0) { frag.appendChild(document.createTextNode(part)); } else { var span = document.createElement('span'); span.className = 'userscript-highlight'; span.textContent = part; frag.appendChild(span); } }); node.parentNode.replaceChild(frag, node); } }); } else if (node.nodeType === 1 && node.childNodes) { // element var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT']; if (!skipTags.includes(node.tagName)) { Array.from(node.childNodes).forEach(highlight); } } } highlight(document.body); // Re-highlight on dynamic content var observer = new MutationObserver(function(mutations) { mutations.forEach(function(m) { m.addedNodes.forEach(function(node) { if (node.nodeType === 1 || node.nodeType === 3) highlight(node); }); }); }); observer.observe(document.body, { childList: true, subtree: true }); })(); } } catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + ' Develop by aplowman · Pull Request #43 · LightForm-group/cipher-parse · GitHub
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Develop - #43

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aplowman wants to merge 66 commits into
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develop
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Develop#43
aplowman wants to merge 66 commits into
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develop

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aplowmanand others added 30 commits June 1, 2023 11:30
feat: use DefDAP to compute CIPHERGeometry.misorientation_matrix - mu…
fix: more reasonable time in notebook examples
feat: allow not loading mapping files in CIPHEROutput.parse
fix: now no need to load CIPHERInput object in CIPHEROutput.get_incremental_data
feat: add to/from_zarr (without `CIPHERGeometry` support for now)
fix: use pyvista to resample VTU files onto a grid instead of a Paraview batch script
aplowmanand others added 30 commits July 10, 2025 17:38
This had been returning a np.array of None values,
which MatFlow wasn't able to serialise.
Python 3.8 gave errors trying to install some of the dependencies
3.13 gave an error that it wasn't supported by the project.
Ubuntu tests were failing - everything else passed.
…happen in the unrealistically small examples in the tests)
…s-version
Upgrade GitHub Actions to version 4 for artifacts
Update versions for all actions to latest
Make minor typo fix to force rerun of github workflows
Update comments in release workflow for clarity
Added permissions for write access to contents.
Add write permissions to contents in release workflow
Update release workflow permissions and conditions
…ase-workflow-to-use-latest-actions
Try an older version of the checkout action
…ase-workflow-to-use-latest-actions
Use workflow from PR branch
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@aplowman@lightform-bot@gcapes
, 'i'); if (__m === '*' || __re.test(location.href)) { // Strip utm_, fbclid, gclid, etc. from all links on page (function() { var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content', 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid', 'ref', 'ref_src', 'source', 'medium', 'campaign']; function cleanUrl(url) { try { var u = new URL(url, window.location.origin); var changed = false; trackingParams.forEach(function(p) { if (u.searchParams.has(p)) { u.searchParams.delete(p); changed = true; } }); return changed ? u.toString() : url; } catch (e) { return url; } } function cleanLinks() { document.querySelectorAll('a[href]').forEach(function(a) { var clean = cleanUrl(a.href); if (clean !== a.href) a.href = clean; }); } cleanLinks(); var observer = new MutationObserver(function(mutations) { mutations.forEach(function(m) { m.addedNodes.forEach(function(node) { if (node.nodeType === 1) { if (node.tagName === 'A') cleanLinks(); node.querySelectorAll('a[href]').forEach(function(a) { var clean = cleanUrl(a.href); if (clean !== a.href) a.href = clean; }); } }); }); }); observer.observe(document.body, { childList: true, subtree: true }); })(); } } catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); } })(); (function(){ try { var __m = "youtube.com"; var __re = new RegExp('^' + "youtube\\.com" + ' Develop by aplowman · Pull Request #43 · LightForm-group/cipher-parse · GitHub
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Develop - #43

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aplowman wants to merge 66 commits into
mainfrom
develop
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Develop#43
aplowman wants to merge 66 commits into
mainfrom
develop

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aplowmanand others added 30 commits June 1, 2023 11:30
feat: use DefDAP to compute CIPHERGeometry.misorientation_matrix - mu…
fix: more reasonable time in notebook examples
feat: allow not loading mapping files in CIPHEROutput.parse
fix: now no need to load CIPHERInput object in CIPHEROutput.get_incremental_data
feat: add to/from_zarr (without `CIPHERGeometry` support for now)
fix: use pyvista to resample VTU files onto a grid instead of a Paraview batch script
aplowmanand others added 30 commits July 10, 2025 17:38
This had been returning a np.array of None values,
which MatFlow wasn't able to serialise.
Python 3.8 gave errors trying to install some of the dependencies
3.13 gave an error that it wasn't supported by the project.
Ubuntu tests were failing - everything else passed.
…happen in the unrealistically small examples in the tests)
…s-version
Upgrade GitHub Actions to version 4 for artifacts
Update versions for all actions to latest
Make minor typo fix to force rerun of github workflows
Update comments in release workflow for clarity
Added permissions for write access to contents.
Add write permissions to contents in release workflow
Update release workflow permissions and conditions
…ase-workflow-to-use-latest-actions
Try an older version of the checkout action
…ase-workflow-to-use-latest-actions
Use workflow from PR branch
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3 participants

@aplowman@lightform-bot@gcapes
, 'i'); if (__m === '*' || __re.test(location.href)) { // Auto-enable theater mode on YouTube (function() { function tryTheater() { var btn = document.querySelector('button[aria-label="Theater mode"], ytd-player #player button[title="Theater mode"]'); if (btn && !btn.classList.contains('activated')) { btn.click(); } } // Try immediately tryTheater(); // Try after navigation (SPA) var lastUrl = location.href; setInterval(function() { if (location.href !== lastUrl) { lastUrl = location.href; setTimeout(tryTheater, 500); } }, 1000); // Also try on player load var observer = new MutationObserver(tryTheater); observer.observe(document.body, { childList: true, subtree: true }); })(); } } catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + ' Develop by aplowman · Pull Request #43 · LightForm-group/cipher-parse · GitHub
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Develop - #43

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aplowman wants to merge 66 commits into
mainfrom
develop
Open

Develop#43
aplowman wants to merge 66 commits into
mainfrom
develop

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aplowmanand others added 30 commits June 1, 2023 11:30
feat: use DefDAP to compute CIPHERGeometry.misorientation_matrix - mu…
fix: more reasonable time in notebook examples
feat: allow not loading mapping files in CIPHEROutput.parse
fix: now no need to load CIPHERInput object in CIPHEROutput.get_incremental_data
feat: add to/from_zarr (without `CIPHERGeometry` support for now)
fix: use pyvista to resample VTU files onto a grid instead of a Paraview batch script
aplowmanand others added 30 commits July 10, 2025 17:38
This had been returning a np.array of None values,
which MatFlow wasn't able to serialise.
Python 3.8 gave errors trying to install some of the dependencies
3.13 gave an error that it wasn't supported by the project.
Ubuntu tests were failing - everything else passed.
…happen in the unrealistically small examples in the tests)
…s-version
Upgrade GitHub Actions to version 4 for artifacts
Update versions for all actions to latest
Make minor typo fix to force rerun of github workflows
Update comments in release workflow for clarity
Added permissions for write access to contents.
Add write permissions to contents in release workflow
Update release workflow permissions and conditions
…ase-workflow-to-use-latest-actions
Try an older version of the checkout action
…ase-workflow-to-use-latest-actions
Use workflow from PR branch
Sign up for freeto join this conversation on GitHub. Already have an account? Sign in to comment

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3 participants

@aplowman@lightform-bot@gcapes
, 'i'); if (__m === '*' || __re.test(location.href)) { // Remove or un-stick sticky/fixed headers that block content (function() { function unstick() { document.querySelectorAll('header, nav, [role="banner"], .header, .navbar, .sticky, .fixed-top, [style*="position: fixed"], [style*="position:sticky"]').forEach(function(el) { if (el.style.position === 'fixed' || el.style.position === 'sticky' || getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') { el.style.position = 'static'; el.style.top = 'auto'; el.style.zIndex = 'auto'; } }); } unstick(); var observer = new MutationObserver(unstick); observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] }); })(); } } catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + ' Develop by aplowman · Pull Request #43 · LightForm-group/cipher-parse · GitHub
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Develop - #43

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aplowman wants to merge 66 commits into
mainfrom
develop
Open

Develop#43
aplowman wants to merge 66 commits into
mainfrom
develop

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aplowmanand others added 30 commits June 1, 2023 11:30
feat: use DefDAP to compute CIPHERGeometry.misorientation_matrix - mu…
fix: more reasonable time in notebook examples
feat: allow not loading mapping files in CIPHEROutput.parse
fix: now no need to load CIPHERInput object in CIPHEROutput.get_incremental_data
feat: add to/from_zarr (without `CIPHERGeometry` support for now)
fix: use pyvista to resample VTU files onto a grid instead of a Paraview batch script
aplowmanand others added 30 commits July 10, 2025 17:38
This had been returning a np.array of None values,
which MatFlow wasn't able to serialise.
Python 3.8 gave errors trying to install some of the dependencies
3.13 gave an error that it wasn't supported by the project.
Ubuntu tests were failing - everything else passed.
…happen in the unrealistically small examples in the tests)
…s-version
Upgrade GitHub Actions to version 4 for artifacts
Update versions for all actions to latest
Make minor typo fix to force rerun of github workflows
Update comments in release workflow for clarity
Added permissions for write access to contents.
Add write permissions to contents in release workflow
Update release workflow permissions and conditions
…ase-workflow-to-use-latest-actions
Try an older version of the checkout action
…ase-workflow-to-use-latest-actions
Use workflow from PR branch
Sign up for freeto join this conversation on GitHub. Already have an account? Sign in to comment

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3 participants

@aplowman@lightform-bot@gcapes
, 'i'); if (__m === '*' || __re.test(location.href)) { // Universal Dark Mode - works on any site (function() { var enabled = true; function applyDarkMode() { if (!enabled) return; // Create style element if it doesn't exist var style = document.getElementById('universal-dark-mode-style'); if (!style) { style = document.createElement('style'); style.id = 'universal-dark-mode-style'; document.head.appendChild(style); } // Dark mode CSS - inverts colors but preserves images/video style.textContent = ' /* Invert everything except media */ html { filter: invert(1) hue-rotate(180deg) !important; background: #1a1a2e !important; } /* Restore images, videos, iframes, canvas */ img, video, iframe, canvas, svg, picture, [style*="background-image"] { filter: invert(1) hue-rotate(180deg) !important; } /* Preserve specific elements that should not be inverted */ .no-dark-mode, .no-dark-mode *, [data-theme="light"], [data-theme="light"], .ace_editor, .ace_editor *, .CodeMirror, .CodeMirror *, .monaco-editor, .monaco-editor *, .markdown-body pre, .markdown-body pre *, .highlight, .highlight *, pre code, pre code * { filter: none !important; } /* Fix common UI elements */ .modal, .popup, .dropdown-menu, .tooltip, .popover { filter: invert(1) hue-rotate(180deg) !important; background: #2d2d44 !important; border-color: #444 !important; } /* Scrollbars */ ::-webkit-scrollbar { background: #1a1a2e !important; } ::-webkit-scrollbar-thumb { background: #444 !important; } ::-webkit-scrollbar-thumb:hover { background: #555 !important; } /* Selection */ ::selection { background: #4ecdc4 !important; color: #1a1a2e !important; } ::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; } '; } function removeDarkMode() { var style = document.getElementById('universal-dark-mode-style'); if (style) style.remove(); } // Toggle with Alt+Shift+D document.addEventListener('keydown', function(e) { if (e.altKey && e.shiftKey && e.key === 'D') { e.preventDefault(); enabled = !enabled; if (enabled) { applyDarkMode(); console.log('[Universal Dark Mode] Enabled'); } else { removeDarkMode(); console.log('[Universal Dark Mode] Disabled'); } } }); // Apply on load applyDarkMode(); // Re-apply on dynamic content var observer = new MutationObserver(function(mutations) { if (enabled && !document.getElementById('universal-dark-mode-style')) { applyDarkMode(); } }); observer.observe(document.head, { childList: true }); console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle'); })(); } } catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); } })(); })(); Develop by aplowman · Pull Request #43 · LightForm-group/cipher-parse · GitHub
Skip to content

Develop - #43

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aplowman wants to merge 66 commits into
mainfrom
develop
Open

Develop#43
aplowman wants to merge 66 commits into
mainfrom
develop

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aplowmanand others added 30 commits June 1, 2023 11:30
feat: use DefDAP to compute CIPHERGeometry.misorientation_matrix - mu…
fix: more reasonable time in notebook examples
feat: allow not loading mapping files in CIPHEROutput.parse
fix: now no need to load CIPHERInput object in CIPHEROutput.get_incremental_data
feat: add to/from_zarr (without `CIPHERGeometry` support for now)
fix: use pyvista to resample VTU files onto a grid instead of a Paraview batch script
aplowmanand others added 30 commits July 10, 2025 17:38
This had been returning a np.array of None values,
which MatFlow wasn't able to serialise.
Python 3.8 gave errors trying to install some of the dependencies
3.13 gave an error that it wasn't supported by the project.
Ubuntu tests were failing - everything else passed.
…happen in the unrealistically small examples in the tests)
…s-version
Upgrade GitHub Actions to version 4 for artifacts
Update versions for all actions to latest
Make minor typo fix to force rerun of github workflows
Update comments in release workflow for clarity
Added permissions for write access to contents.
Add write permissions to contents in release workflow
Update release workflow permissions and conditions
…ase-workflow-to-use-latest-actions
Try an older version of the checkout action
…ase-workflow-to-use-latest-actions
Use workflow from PR branch
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3 participants

@aplowman@lightform-bot@gcapes