Pinned Loading

1. PathoGenOmics-Lab/pathotyprPathoGenOmics-Lab/pathotyprPublic

   Genome classificator using machine learning and SNP markers.

   JavaScript 12 1

2. PathoGenOmics-Lab/snpickPathoGenOmics-Lab/snpickPublic

   snpick is a fast and memory-efficient Rust-based SNP extraction tool designed to handle large genomic alignments with minimal RAM usage and high-speed performance.

   Rust 16 2

3. PathoGenOmics-Lab/get_MNVPathoGenOmics-Lab/get_MNVPublic

   Identifies multiple SNVs within the same codon, reclassifies them as MNVs, and accurately computes resulting amino acid changes from genomic reads

   Rust 10 1

4. PathoGenOmics-Lab/fsticPathoGenOmics-Lab/fsticPublic

   Calculates pairwise distances between samples using alelle frequencies

   Rust 8

5. PathoGenOmics-Lab/mycolorsTBPathoGenOmics-Lab/mycolorsTBPublic

   R Color package for Mycobacterium tuberculosis complex

   R 6

6. PathoGenOmics-Lab/distreePathoGenOmics-Lab/distreePublic

   Extracts a distance matrix from a phylogeny (parallel, low-memory)

   Rust 3