selectionScanExercise

This repository contains code and instructions for the selection scan exercise written by Dan Schrider for EMSI 2021. See detecting_sweeps.pdf for more info.

Name		Name	Last commit message	Last commit date
ihsExercise		ihsExercise
misc		misc
preCookedData		preCookedData
0_simulate_data.sh		0_simulate_data.sh
1_calculate_stats.sh		1_calculate_stats.sh
1b_steal_stats.sh		1b_steal_stats.sh
1c_plot_stat_means.sh		1c_plot_stat_means.sh
2_train_classifier.sh		2_train_classifier.sh
3_test_classifier.sh		3_test_classifier.sh
4_apply_to_data.sh		4_apply_to_data.sh
README.md		README.md
detecting_sweeps.docx		detecting_sweeps.docx
detecting_sweeps.pdf		detecting_sweeps.pdf
diploSHIC.py		diploSHIC.py
plotStatMeans.py		plotStatMeans.py
testClassifierAndPlotConfusionMatrix.py		testClassifierAndPlotConfusionMatrix.py

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