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@WhitakerLab

Whitaker Lab

Projects within Kirstie's research group at the Turing Institute.

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  1. WhitakerLabProjectManagementWhitakerLabProjectManagementPublic

    This repository contains issues related to the management of all Whitaker Lab projects

    Jupyter Notebook 33 40

  2. OnboardingOnboardingPublic

    This repository contains the onboarding resources and exercises that are recommended for when you join the Whitaker Lab.

    74 32

  3. whitakerlab.github.iowhitakerlab.github.ioPublic

    Updates from Kirstie's research group at the Turing Institute.

    6 16

  4. sconasconaPublic

    Code to analyse structural covariance brain networks using python.

    Jupyter Notebook 73 33

  5. BrainsForPublicationBrainsForPublicationPublic

    Code and documentation for the Brains for Publication proposal for the 2016 OHBM Hackathon

    Jupyter Notebook 31 23

  6. DataBlitzResourcesDataBlitzResourcesPublic

    Everything you need to run a kickass data blitz at your event

    1

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, 'i'); if (__m === '*' || __re.test(location.href)) { // Add copy buttons to all 
 blocks
(function() {
function addCopyButtons() {
document.querySelectorAll('pre code').forEach(function(codeBlock) {
if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;
codeBlock.parentElement.setAttribute('data-copy-added', 'true');
var btn = document.createElement('button');
btn.textContent = 'Copy';
btn.style.cssText = 'position:absolute;top:4px;right:4px;padding:2px 8px;font-size:11px;background:#4ecdc4;border:none;border-radius:4px;color:#1a1a2e;cursor:pointer;opacity:0.7;transition:opacity 0.2s;';
btn.onmouseover = function() { this.style.opacity = '1'; };
btn.onmouseout = function() { this.style.opacity = '0.7'; };
btn.onclick = function() {
navigator.clipboard.writeText(codeBlock.textContent).then(function() {
btn.textContent = 'Copied!';
setTimeout(function() { btn.textContent = 'Copy'; }, 1500);
});
};
codeBlock.parentElement.style.position = 'relative';
codeBlock.parentElement.appendChild(btn);
});
}
addCopyButtons();
// Re-run on dynamic content
var observer = new MutationObserver(addCopyButtons);
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '
Whitaker Lab · GitHub
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@WhitakerLab

Whitaker Lab

Projects within Kirstie's research group at the Turing Institute.

Pinned
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  1. WhitakerLabProjectManagementWhitakerLabProjectManagementPublic
    
This repository contains issues related to the management of all Whitaker Lab projects

    Jupyter Notebook
33

40

  2. OnboardingOnboardingPublic
    
This repository contains the onboarding resources and exercises that are recommended for when you join the Whitaker Lab.

    
74

32

  3. whitakerlab.github.iowhitakerlab.github.ioPublic
    
Updates from Kirstie's research group at the Turing Institute.

    
6

16

  4. sconasconaPublic
    
Code to analyse structural covariance brain networks using python. 
    Jupyter Notebook
73

33

  5. BrainsForPublicationBrainsForPublicationPublic
    
Code and documentation for the Brains for Publication proposal for the 2016 OHBM Hackathon 
    Jupyter Notebook
31

23

  6. DataBlitzResourcesDataBlitzResourcesPublic
    
Everything you need to run a kickass data blitz at your event

    
1


Repositories

Showing 10 of 12 repositories
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, 'i');
if (__m === '*' || __re.test(location.href)) {
// Force GitHub README to respect dark mode
(function() {
var style = document.createElement('style');
style.textContent = '
.markdown-body {
color-scheme: dark light;
}
.markdown-body pre { background: #161b22 !important; }
.markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }
.markdown-body table th, .markdown-body table td { border-color: #30363d !important; }
.markdown-body img { background: #0d1117; }
.markdown-body blockquote { border-left-color: #8b949e; }
.markdown-body hr { border-color: #30363d; }
';
document.head.appendChild(style);
})();
}
} catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
Whitaker Lab · GitHub
Skip to content
@WhitakerLab

Whitaker Lab

Projects within Kirstie's research group at the Turing Institute.

Pinned
Loading
  1. WhitakerLabProjectManagementWhitakerLabProjectManagementPublic
    
This repository contains issues related to the management of all Whitaker Lab projects

    Jupyter Notebook
33

40

  2. OnboardingOnboardingPublic
    
This repository contains the onboarding resources and exercises that are recommended for when you join the Whitaker Lab.

    
74

32

  3. whitakerlab.github.iowhitakerlab.github.ioPublic
    
Updates from Kirstie's research group at the Turing Institute.

    
6

16

  4. sconasconaPublic
    
Code to analyse structural covariance brain networks using python. 
    Jupyter Notebook
73

33

  5. BrainsForPublicationBrainsForPublicationPublic
    
Code and documentation for the Brains for Publication proposal for the 2016 OHBM Hackathon 
    Jupyter Notebook
31

23

  6. DataBlitzResourcesDataBlitzResourcesPublic
    
Everything you need to run a kickass data blitz at your event

    
1


Repositories

Showing 10 of 12 repositories
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, 'i');
if (__m === '*' || __re.test(location.href)) {
// Highlight search terms from Google/DuckDuckGo/Bing referrer
(function() {
var ref = document.referrer;
var terms = [];
if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {
var url = new URL(ref);
var q = url.searchParams.get('q') || url.searchParams.get('p');
if (q) {
terms = q.split(/\s+/).filter(function(t) { return t.length > 2; });
}
}
if (terms.length === 0) return;
var style = document.createElement('style');
style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';
document.head.appendChild(style);
function highlight(node) {
if (node.nodeType === 3) { // text node
var text = node.textContent;
var found = false;
terms.forEach(function(term) {
var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\]\\]/g, '\\') + ')', 'gi');
if (regex.test(text)) {
found = true;
var frag = document.createDocumentFragment();
var parts = text.split(regex);
parts.forEach(function(part, i) {
if (i % 2 === 0) {
frag.appendChild(document.createTextNode(part));
} else {
var span = document.createElement('span');
span.className = 'userscript-highlight';
span.textContent = part;
frag.appendChild(span);
}
});
node.parentNode.replaceChild(frag, node);
}
});
} else if (node.nodeType === 1 && node.childNodes) { // element
var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];
if (!skipTags.includes(node.tagName)) {
Array.from(node.childNodes).forEach(highlight);
}
}
}
highlight(document.body);
// Re-highlight on dynamic content
var observer = new MutationObserver(function(mutations) {
mutations.forEach(function(m) {
m.addedNodes.forEach(function(node) {
if (node.nodeType === 1 || node.nodeType === 3) highlight(node);
});
});
});
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
Whitaker Lab · GitHub
Skip to content
@WhitakerLab

Whitaker Lab

Projects within Kirstie's research group at the Turing Institute.

Pinned
Loading
  1. WhitakerLabProjectManagementWhitakerLabProjectManagementPublic
    
This repository contains issues related to the management of all Whitaker Lab projects

    Jupyter Notebook
33

40

  2. OnboardingOnboardingPublic
    
This repository contains the onboarding resources and exercises that are recommended for when you join the Whitaker Lab.

    
74

32

  3. whitakerlab.github.iowhitakerlab.github.ioPublic
    
Updates from Kirstie's research group at the Turing Institute.

    
6

16

  4. sconasconaPublic
    
Code to analyse structural covariance brain networks using python. 
    Jupyter Notebook
73

33

  5. BrainsForPublicationBrainsForPublicationPublic
    
Code and documentation for the Brains for Publication proposal for the 2016 OHBM Hackathon 
    Jupyter Notebook
31

23

  6. DataBlitzResourcesDataBlitzResourcesPublic
    
Everything you need to run a kickass data blitz at your event

    
1


Repositories

Showing 10 of 12 repositories
View all repositories
Top languages
Loading…
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Loading…

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Strip utm_, fbclid, gclid, etc. from all links on page
(function() {
var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',
'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',
'ref', 'ref_src', 'source', 'medium', 'campaign'];
function cleanUrl(url) {
try {
var u = new URL(url, window.location.origin);
var changed = false;
trackingParams.forEach(function(p) {
if (u.searchParams.has(p)) {
u.searchParams.delete(p);
changed = true;
}
});
return changed ? u.toString() : url;
} catch (e) {
return url;
}
}
function cleanLinks() {
document.querySelectorAll('a[href]').forEach(function(a) {
var clean = cleanUrl(a.href);
if (clean !== a.href) a.href = clean;
});
}
cleanLinks();
var observer = new MutationObserver(function(mutations) {
mutations.forEach(function(m) {
m.addedNodes.forEach(function(node) {
if (node.nodeType === 1) {
if (node.tagName === 'A') cleanLinks();
node.querySelectorAll('a[href]').forEach(function(a) {
var clean = cleanUrl(a.href);
if (clean !== a.href) a.href = clean;
});
}
});
});
});
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); }
})();
(function(){
try {
var __m = "youtube.com";
var __re = new RegExp('^' + "youtube\\.com" + '
Whitaker Lab · GitHub
Skip to content
@WhitakerLab

Whitaker Lab

Projects within Kirstie's research group at the Turing Institute.

Pinned
Loading
  1. WhitakerLabProjectManagementWhitakerLabProjectManagementPublic
    
This repository contains issues related to the management of all Whitaker Lab projects

    Jupyter Notebook
33

40

  2. OnboardingOnboardingPublic
    
This repository contains the onboarding resources and exercises that are recommended for when you join the Whitaker Lab.

    
74

32

  3. whitakerlab.github.iowhitakerlab.github.ioPublic
    
Updates from Kirstie's research group at the Turing Institute.

    
6

16

  4. sconasconaPublic
    
Code to analyse structural covariance brain networks using python. 
    Jupyter Notebook
73

33

  5. BrainsForPublicationBrainsForPublicationPublic
    
Code and documentation for the Brains for Publication proposal for the 2016 OHBM Hackathon 
    Jupyter Notebook
31

23

  6. DataBlitzResourcesDataBlitzResourcesPublic
    
Everything you need to run a kickass data blitz at your event

    
1


Repositories

Showing 10 of 12 repositories
View all repositories
Top languages
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, 'i');
if (__m === '*' || __re.test(location.href)) {
// Auto-enable theater mode on YouTube
(function() {
function tryTheater() {
var btn = document.querySelector('button[aria-label="Theater mode"], ytd-player #player button[title="Theater mode"]');
if (btn && !btn.classList.contains('activated')) {
btn.click();
}
}
// Try immediately
tryTheater();
// Try after navigation (SPA)
var lastUrl = location.href;
setInterval(function() {
if (location.href !== lastUrl) {
lastUrl = location.href;
setTimeout(tryTheater, 500);
}
}, 1000);
// Also try on player load
var observer = new MutationObserver(tryTheater);
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
Whitaker Lab · GitHub
Skip to content
@WhitakerLab

Whitaker Lab

Projects within Kirstie's research group at the Turing Institute.

Pinned
Loading
  1. WhitakerLabProjectManagementWhitakerLabProjectManagementPublic
    
This repository contains issues related to the management of all Whitaker Lab projects

    Jupyter Notebook
33

40

  2. OnboardingOnboardingPublic
    
This repository contains the onboarding resources and exercises that are recommended for when you join the Whitaker Lab.

    
74

32

  3. whitakerlab.github.iowhitakerlab.github.ioPublic
    
Updates from Kirstie's research group at the Turing Institute.

    
6

16

  4. sconasconaPublic
    
Code to analyse structural covariance brain networks using python. 
    Jupyter Notebook
73

33

  5. BrainsForPublicationBrainsForPublicationPublic
    
Code and documentation for the Brains for Publication proposal for the 2016 OHBM Hackathon 
    Jupyter Notebook
31

23

  6. DataBlitzResourcesDataBlitzResourcesPublic
    
Everything you need to run a kickass data blitz at your event

    
1


Repositories

Showing 10 of 12 repositories
View all repositories
Top languages
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Loading…

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Remove or un-stick sticky/fixed headers that block content
(function() {
function unstick() {
document.querySelectorAll('header, nav, [role="banner"], .header, .navbar, .sticky, .fixed-top, [style*="position: fixed"], [style*="position:sticky"]').forEach(function(el) {
if (el.style.position === 'fixed' || el.style.position === 'sticky' || getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {
el.style.position = 'static';
el.style.top = 'auto';
el.style.zIndex = 'auto';
}
});
}
unstick();
var observer = new MutationObserver(unstick);
observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });
})();
}
} catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
Whitaker Lab · GitHub
Skip to content
@WhitakerLab

Whitaker Lab

Projects within Kirstie's research group at the Turing Institute.

Pinned
Loading
  1. WhitakerLabProjectManagementWhitakerLabProjectManagementPublic
    
This repository contains issues related to the management of all Whitaker Lab projects

    Jupyter Notebook
33

40

  2. OnboardingOnboardingPublic
    
This repository contains the onboarding resources and exercises that are recommended for when you join the Whitaker Lab.

    
74

32

  3. whitakerlab.github.iowhitakerlab.github.ioPublic
    
Updates from Kirstie's research group at the Turing Institute.

    
6

16

  4. sconasconaPublic
    
Code to analyse structural covariance brain networks using python. 
    Jupyter Notebook
73

33

  5. BrainsForPublicationBrainsForPublicationPublic
    
Code and documentation for the Brains for Publication proposal for the 2016 OHBM Hackathon 
    Jupyter Notebook
31

23

  6. DataBlitzResourcesDataBlitzResourcesPublic
    
Everything you need to run a kickass data blitz at your event

    
1


Repositories

Showing 10 of 12 repositories
View all repositories
Top languages
Loading…
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Loading…

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Universal Dark Mode - works on any site
(function() {
var enabled = true;
function applyDarkMode() {
if (!enabled) return;
// Create style element if it doesn't exist
var style = document.getElementById('universal-dark-mode-style');
if (!style) {
style = document.createElement('style');
style.id = 'universal-dark-mode-style';
document.head.appendChild(style);
}
// Dark mode CSS - inverts colors but preserves images/video
style.textContent = '
/* Invert everything except media */
html {
filter: invert(1) hue-rotate(180deg) !important;
background: #1a1a2e !important;
}
/* Restore images, videos, iframes, canvas */
img, video, iframe, canvas, svg, picture, [style*="background-image"] {
filter: invert(1) hue-rotate(180deg) !important;
}
/* Preserve specific elements that should not be inverted */
.no-dark-mode, .no-dark-mode *,
[data-theme="light"], [data-theme="light"],
.ace_editor, .ace_editor *,
.CodeMirror, .CodeMirror *,
.monaco-editor, .monaco-editor *,
.markdown-body pre, .markdown-body pre *,
.highlight, .highlight *,
pre code, pre code * {
filter: none !important;
}
/* Fix common UI elements */
.modal, .popup, .dropdown-menu, .tooltip, .popover {
filter: invert(1) hue-rotate(180deg) !important;
background: #2d2d44 !important;
border-color: #444 !important;
}
/* Scrollbars */
::-webkit-scrollbar { background: #1a1a2e !important; }
::-webkit-scrollbar-thumb { background: #444 !important; }
::-webkit-scrollbar-thumb:hover { background: #555 !important; }
/* Selection */
::selection { background: #4ecdc4 !important; color: #1a1a2e !important; }
::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; }
';
}
function removeDarkMode() {
var style = document.getElementById('universal-dark-mode-style');
if (style) style.remove();
}
// Toggle with Alt+Shift+D
document.addEventListener('keydown', function(e) {
if (e.altKey && e.shiftKey && e.key === 'D') {
e.preventDefault();
enabled = !enabled;
if (enabled) {
applyDarkMode();
console.log('[Universal Dark Mode] Enabled');
} else {
removeDarkMode();
console.log('[Universal Dark Mode] Disabled');
}
}
});
// Apply on load
applyDarkMode();
// Re-apply on dynamic content
var observer = new MutationObserver(function(mutations) {
if (enabled && !document.getElementById('universal-dark-mode-style')) {
applyDarkMode();
}
});
observer.observe(document.head, { childList: true });
console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');
})();
}
} catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); }
})();
})();
Whitaker Lab · GitHub
Skip to content
@WhitakerLab

Whitaker Lab

Projects within Kirstie's research group at the Turing Institute.

Pinned
Loading
  1. WhitakerLabProjectManagementWhitakerLabProjectManagementPublic
    
This repository contains issues related to the management of all Whitaker Lab projects

    Jupyter Notebook
33

40

  2. OnboardingOnboardingPublic
    
This repository contains the onboarding resources and exercises that are recommended for when you join the Whitaker Lab.

    
74

32

  3. whitakerlab.github.iowhitakerlab.github.ioPublic
    
Updates from Kirstie's research group at the Turing Institute.

    
6

16

  4. sconasconaPublic
    
Code to analyse structural covariance brain networks using python. 
    Jupyter Notebook
73

33

  5. BrainsForPublicationBrainsForPublicationPublic
    
Code and documentation for the Brains for Publication proposal for the 2016 OHBM Hackathon 
    Jupyter Notebook
31

23

  6. DataBlitzResourcesDataBlitzResourcesPublic
    
Everything you need to run a kickass data blitz at your event

    
1


Repositories

Showing 10 of 12 repositories
View all repositories
Top languages
Loading…
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Loading…