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Achievements

Achievement: Pair Extraordinairex3Achievement: QuickdrawAchievement: YOLOAchievement: Pull Sharkx3Achievement: StarstruckAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair Extraordinairex3Achievement: QuickdrawAchievement: YOLOAchievement: Pull Sharkx3Achievement: StarstruckAchievement: Arctic Code Vault Contributor

Organizations

@biom262@beelabhmc@snakemake@studycloud@bioinfo-ucsd@gymrek-lab@CAST-genomics

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aryarm/README.md

Arya Massarat

Bioinformatics PhD Student in the lab of Melissa Gymrek @ UC San Diego

Reproducibility enthusiast | Fine-mapping, GWAS | he/him/his

My work

happlerhaptools

VarCAas_analysis

flower_map

Other tools I help maintain

TRToolspanCT

core

Past projects

demuxVarBench

sc_ratsdemux

demux

Projects I have contributed to

WASPsnakemake

bioconda-recipesbioconda-recipes

Other helpful resources and fun projects

demo-docker-actiontransit

stepik-clihmcbbq

Pinned Loading

  1. gymrek-lab/happlergymrek-lab/happlerPublic

    A haplotype-based fine-mapping method

    Python 3

  2. mcvickerlab/varCAmcvickerlab/varCAPublic

    Use an ensemble of variant callers to call variants from ATAC-seq data

    Python 23 6

  3. CAST-genomics/haptoolsCAST-genomics/haptoolsPublic

    Ancestry and haplotype aware simulation of genotypes and phenotypes for complex trait analysis

    Python 27 5

  4. beelabhmc/flower_mapbeelabhmc/flower_mapPublic

    Automated flower species classification for generating honey-bee foraging maps from drone imagery

    Python 5 2