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1. CellProfiler/CellProfilerCellProfiler/CellProfilerPublic

   An open-source application for biological image analysis

   Python 1.1k 421

2. CellProfiler/CellProfiler-AnalystCellProfiler/CellProfiler-AnalystPublic

   Open-source software for exploring and analyzing large, high-dimensional image-derived data.

   Python 170 75

3. CellProfiler/CellProfiler-pluginsCellProfiler/CellProfiler-pluginsPublic

   Community-contributed and experimental CellProfiler modules.

   Python 77 74

4. DistributedScience/Distributed-CellProfilerDistributedScience/Distributed-CellProfilerPublic

   Run encapsulated docker containers with CellProfiler in the Amazon Web Services infrastructure.

   Python 45 26

5. CellProfiler/tutorialsCellProfiler/tutorialsPublic

   CellProfiler tutorial pipelines and images

   Jupyter Notebook 104 88

6. broadinstitute/imaging-platform-pipelinesbroadinstitute/imaging-platform-pipelinesPublic

   Cell Painting and other pipelines from the Imaging Platform

   24 14