Skip to content
View cbrueffer's full-sized avatar
184 followers · 0 following

Achievements

Achievement: Pair Extraordinairex4Achievement: YOLOAchievement: QuickdrawAchievement: Mars 2020 ContributorAchievement: Arctic Code Vault ContributorAchievement: Starstruckx2Achievement: Pull Sharkx4

Achievements

Achievement: Pair Extraordinairex4Achievement: YOLOAchievement: QuickdrawAchievement: Mars 2020 ContributorAchievement: Arctic Code Vault ContributorAchievement: Starstruckx2Achievement: Pull Sharkx4

Highlights

  • Pro

Organizations

@biopython@freebsd@TrustedBSD@openbsm@translational-oncogenomics@conda-forge@bioconda@snakemake@nf-core@insilicoconsulting

Block or report cbrueffer

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don’t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
cbrueffer/README.md

Christian Brueffer – Bioinformatics and Data Consultant 🧬

Linkedin BadgePersonal Website BadgeInSilico Consulting Website BadgeGoogle Scholar BadgeTwitter BadgeGitHub Badge

I'm a bioinformatics and data consultant available for hire through my company InSilico Consulting AB. Based in Lund, Sweden, I'm located in the Medicon Valley region encompassing Copenhagen (Denmark), Malmö and Lund (Sweden).

My focus in both academia and industry has been the exploration of cancer through genomic methods. See Google Scholar for a list of my research publications.

As an active open source software developer I focus on providing up-to-date software packages to the bioinformatics and data science community through Bioconda and conda-forge, and improving various other software projects through my contributions.

Pinned Loading

  1. bcbio/bcbio-nextgenbcbio/bcbio-nextgenPublic

    Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

    Python 1k 355

  2. biopython/biopythonbiopython/biopythonPublic

    Official git repository for Biopython (originally converted from CVS)

    Python 5.2k 1.9k

  3. freebsd/freebsd-srcfreebsd/freebsd-srcPublic

    The FreeBSD src tree publish-only repository. Experimenting with 'simple' pull requests....

    C 9.3k 3.4k

  4. openbsm/openbsmopenbsm/openbsmPublic

    OpenBSM open audit implementation

    C 169 55

  5. MutationExplorerMutationExplorerPublic

    R Shiny based lightweight mutation exploration tool

    R 3

  6. insilicoconsulting/snake-chicinsilicoconsulting/snake-chicPublic

    Snakemake wrapper around the Arima Capture Hi-C (CHiC) workflow

    Python 4