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  1. cooler_ontadcooler_ontadPublic

    Tool that wraps OnTAD to work with the cooler ecosystem.

    Python 7 1

  2. gerlichlab/scshic_pipelinegerlichlab/scshic_pipelinePublic

    scsHi-C preprocessing Nextflow pipeline

    Groovy 5

  3. gerlichlab/scshic_dockergerlichlab/scshic_dockerPublic

    Container with tools to analyse scsHi-C data.

    Dockerfile 1

  4. gerlichlab/hicognitiongerlichlab/hicognitionPublic

    A visual exploration and hypothesis testing tool for 3D genomics

    Python 13 2