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1. nf-core/callingcardsnf-core/callingcardsPublic

   A pipeline for processing calling cards data

   Nextflow 5 3

2. callingCardsToolscallingCardsToolsPublic archive

   A collection of objects and functions to work with calling cards sequencing tools. See docs at https://cmatkhan.github.io/callingCardsTools

   Python

3. BSABSAPublic

   A collection of functions intended to facilitate bulk segregant analysis of cryptococcus neoformans strains associated with capsule formation

   R 1

4. labretrieverlabretrieverPublic

   This package defines an extended datacard format based on the Huggingface datacard specification that allows for the precise documentation of experimental data with complex heterogenous designs. It…

   Python 2

5. BrentLab/Dual_Threshold_OptimizationBrentLab/Dual_Threshold_OptimizationPublic

   Dual Threshold Optimization compares two ranked lists of features (e.g. genes) to determine the rank threshold for each list that minimizes the hypergeometric p-value of the overlap of features. It…

   Rust 4 2

6. BrentLab/tfbpshinyBrentLab/tfbpshinyPublic

   A shiny app to explore a collection of yeast binding and perturbation data collected by the brent lab

   Python 2