Update logging

[brokensound77]

resolves #26

This PR:

• exposes --verbose flag to run both stdout and file in debug mode
  • this allows for adding logging.debug statements as needed
• adds color to the stdout logger
• increased verbosity of file log format

Todo

• add a logger for each module (may punt to new PR)

Test

The more verbose file logging format adds the file and line number (newer entries)