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203 followers · 10 following

Achievements

Achievement: Pair ExtraordinaireAchievement: QuickdrawAchievement: YOLOAchievement: Pull Sharkx3Achievement: Arctic Code Vault ContributorAchievement: Starstruck

Achievements

Achievement: Pair ExtraordinaireAchievement: QuickdrawAchievement: YOLOAchievement: Pull Sharkx3Achievement: Arctic Code Vault ContributorAchievement: Starstruck

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@mrc-ide@bacpop

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  1. bacpop/PopPUNKbacpop/PopPUNKPublic

    PopPUNK 👨‍🎤 (POPulation Partitioning Using Nucleotide Kmers)

    Python 109 22

  2. bacpop/PopPIPEbacpop/PopPIPEPublic

    Population analysis PIPEline 🛠🧬

    Python 26 7

  3. mgalardini/pyseermgalardini/pyseerPublic

    SEER, reimplemented in python 🐍🔮

    Python 137 29

  4. bacpop/unitig-callerbacpop/unitig-callerPublic

    Methods to determine sequence element (unitig) presence/absence

    C++ 27 3

  5. bacpop/ska.rustbacpop/ska.rustPublic

    Split k-mer analysis – version 2

    Rust 105 9

  6. bacpop/sketchlib.rustbacpop/sketchlib.rustPublic

    Fast sequence distance estimates

    Rust 30 6