[Feature] More efficient cache directory structure - #681

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jan-janssen merged 8 commits into
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Jun 14, 2025
Merged

[Feature] More efficient cache directory structure#681
jan-janssen merged 8 commits into
mainfrom
cache_red

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@jan-janssenjan-janssen commented Jun 14, 2025

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Summary by CodeRabbit

  • Refactor
    • Simplified cache file naming and directory structure from nested directories with fixed filenames to a flat directory using task-specific suffixes (e.g., _i.h5, _o.h5).
    • Updated logic for reading, writing, and checking cache files to match the new naming convention.
  • Tests
    • Adjusted test cases to use the new flat cache file structure and naming scheme.

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Walkthrough

This change refactors the cache file naming and directory structure across multiple modules. It replaces nested directories and fixed filenames with a flat directory structure, using task-key-based filenames with _i.h5 and _o.h5 suffixes for input and output cache files. All affected functions and tests are updated accordingly.

Changes

File(s)Change Summary
executorlib/standalone/cache.pyRefactored get_cache_data to use flat cache directory and process files ending with _o.h5 only.
executorlib/task_scheduler/file/backend.pyUpdated backend_write_file to use _r.h5 and _o.h5 suffixes, and changed base filename slicing logic.
executorlib/task_scheduler/file/shared.pyChanged cache file handling in execute_tasks_h5 and _check_task_output to use flat structure and new suffixes.
executorlib/task_scheduler/interactive/shared.pySimplified cache existence checks and file naming in _execute_task_with_cache to match new flat structure.
tests/test_cache_backend_execute.pyUpdated test cache file paths and directory creation to match the new flat structure and file naming convention.

Sequence Diagram(s)

sequenceDiagram
participant User
participant TaskScheduler
participant CacheDirectory
participant Backend
User->>TaskScheduler: Submit task(s) with cache enabled
TaskScheduler->>CacheDirectory: Check for {task_key}_o.h5
alt Cache hit
CacheDirectory-->>TaskScheduler: Return cached result
else Cache miss
TaskScheduler->>CacheDirectory: Write {task_key}_i.h5
TaskScheduler->>Backend: Execute task
Backend->>CacheDirectory: Write {task_key}_r.h5, then rename to {task_key}_o.h5
Backend-->>TaskScheduler: Return result
end
TaskScheduler-->>User: Return result
Loading

Possibly related PRs

Poem

In the cache where files once nested deep,
Now flat and tidy, they quietly sleep.
No more subfolders, just suffixes clear—
_i.h5 and _o.h5 bring order here!
The rabbit hops by, with a satisfied grin,
For simple paths make life easy to begin.
🐇✨


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Actionable comments posted: 2

🧹 Nitpick comments (3)
executorlib/standalone/cache.py (1)

31-33: Filter with str.endswith + isfile to avoid opening non-files

task_key[-5:] == "_o.h5" works but is brittle and will happily treat sub-directories named foo_o.h5 as files, causing h5py.File(...) to raise.

- file_name = os.path.join(cache_directory, task_key)- if task_key[-5:] == "_o.h5":+ if task_key.endswith("_o.h5"):+ file_name = os.path.join(cache_directory, task_key)+ if not os.path.isfile(file_name):+ continue # skip dirs / special files
tests/test_cache_backend_execute.py (1)

66-68: Remove stale nested-directory creation

The new flat cache layout no longer needs <cache>/<task_key>/.
Leaving this os.makedirs is harmless but clutters the tree and could hide pathing bugs later.

- file_name = os.path.join(cache_directory, task_key + "_i.h5")- os.makedirs(os.path.join(cache_directory, task_key), exist_ok=True)+ file_name = os.path.join(cache_directory, f"{task_key}_i.h5")
executorlib/task_scheduler/file/backend.py (1)

45-46: Derive file_name_out more robustly

os.path.splitext(file_name)[0][:-2] silently chops two characters, assuming the suffix is always _i.
If the naming ever changes (e.g. _in), this will mis-slice.

-from pathlib import Path-file_name_out = os.path.splitext(file_name)[0][:-2]+from pathlib import Path+file_name_out = Path(file_name).with_suffix("").as_posix().removesuffix("_i")

Path.removesuffix (Python ≥ 3.11) or manual if base.endswith("_i"): guards make the intention explicit.
This also improves readability.

📜 Review details

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Reviewing files that changed from the base of the PR and between 4d2dd17 and 8281007.

📒 Files selected for processing (5)
  • executorlib/standalone/cache.py (1 hunks)
  • executorlib/task_scheduler/file/backend.py (1 hunks)
  • executorlib/task_scheduler/file/shared.py (3 hunks)
  • executorlib/task_scheduler/interactive/shared.py (1 hunks)
  • tests/test_cache_backend_execute.py (8 hunks)
🧰 Additional context used
🧬 Code Graph Analysis (2)
tests/test_cache_backend_execute.py (2)
executorlib/task_scheduler/file/hdf.py (1)
  • get_runtime (74-88)
executorlib/task_scheduler/file/shared.py (1)
  • FutureItem (14-49)
executorlib/task_scheduler/file/backend.py (1)
executorlib/task_scheduler/file/hdf.py (1)
  • dump (10-25)
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Comment on lines +154 to +156
os.makedirs(cache_directory, exist_ok=True)
file_name = os.path.join(cache_directory, task_key + "_o.h5")
if task_key + "_o.h5" not in os.listdir(cache_directory):

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🛠️ Refactor suggestion

Prefer os.path.exists() over directory scans for existence checks

Using task_key + "_o.h5" not in os.listdir(cache_directory) forces a full directory listing on every call.
os.path.exists(file_name) (or Path(file_name).exists()) is:

  1. O(1) rather than O(n) on large cache dirs.
  2. Immune to race conditions where a file is created between listdir() and the subsequent logic.
  3. Clearer to read.
- file_name = os.path.join(cache_directory, task_key + "_o.h5")- if task_key + "_o.h5" not in os.listdir(cache_directory):+ file_name = os.path.join(cache_directory, f"{task_key}_o.h5")+ if not os.path.exists(file_name):
📝 Committable suggestion

‼️IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, task_key+"_o.h5")
iftask_key+"_o.h5"notinos.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, f"{task_key}_o.h5")
ifnotos.path.exists(file_name):
🤖 Prompt for AI Agents
In executorlib/task_scheduler/interactive/shared.py around lines 154 to 156,
replace the check using 'task_key + "_o.h5" not in os.listdir(cache_directory)'
with 'not os.path.exists(file_name)'. This avoids scanning the entire directory,
improves performance, prevents race conditions, and makes the code clearer by
directly checking the file's existence.

Comment on lines +111 to 114
if task_key + "_o.h5" not in os.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name = os.path.join(cache_directory, task_key + "_i.h5")
dump(file_name=file_name, data_dict=data_dict)

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🛠️ Refactor suggestion

Use exists() instead of scanning the directory for every task

Similar to the interactive path, scanning os.listdir(cache_directory) for each task does an unnecessary O(n) walk and risks TOCTOU issues.

- if task_key + "_o.h5" not in os.listdir(cache_directory):+ output_path = os.path.join(cache_directory, f"{task_key}_o.h5")+ if not os.path.exists(output_path):

You already compute the same path a few lines later; reuse it to keep the logic DRY.

📝 Committable suggestion

‼️IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
iftask_key+"_o.h5"notinos.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, task_key+"_i.h5")
dump(file_name=file_name, data_dict=data_dict)
# check for the output file directly rather than listing the whole directory
output_path=os.path.join(cache_directory, f"{task_key}_o.h5")
ifnotos.path.exists(output_path):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, f"{task_key}_i.h5")
dump(file_name=file_name, data_dict=data_dict)
🤖 Prompt for AI Agents
In executorlib/task_scheduler/file/shared.py around lines 111 to 114, replace
the check that scans os.listdir(cache_directory) with a direct file existence
check using os.path.exists() for the target file to avoid inefficient directory
scans and TOCTOU issues. Also, reuse the computed file path variable instead of
reconstructing it to keep the code DRY.

@codecov

codecovBot commented Jun 14, 2025

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Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 96.78%. Comparing base (c81d7a2) to head (ab123dc).
Report is 4 commits behind head on main.

Additional details and impacted files
@@ Coverage Diff @@## main #681 +/- ##
==========================================
- Coverage 96.78% 96.78% -0.01% 
==========================================
Files 29 29 Lines 1307 1306 -1 ==========================================
- Hits 1265 1264 -1 
Misses 42 42 

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Skip to content

[Feature] More efficient cache directory structure - #681

Merged
jan-janssen merged 8 commits into
mainfrom
cache_red
Jun 14, 2025
Merged

[Feature] More efficient cache directory structure#681
jan-janssen merged 8 commits into
mainfrom
cache_red

Conversation

@jan-janssen

@jan-janssenjan-janssen commented Jun 14, 2025

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Summary by CodeRabbit

  • Refactor
    • Simplified cache file naming and directory structure from nested directories with fixed filenames to a flat directory using task-specific suffixes (e.g., _i.h5, _o.h5).
    • Updated logic for reading, writing, and checking cache files to match the new naming convention.
  • Tests
    • Adjusted test cases to use the new flat cache file structure and naming scheme.

@coderabbitai

coderabbitaiBot commented Jun 14, 2025

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Walkthrough

This change refactors the cache file naming and directory structure across multiple modules. It replaces nested directories and fixed filenames with a flat directory structure, using task-key-based filenames with _i.h5 and _o.h5 suffixes for input and output cache files. All affected functions and tests are updated accordingly.

Changes

File(s)Change Summary
executorlib/standalone/cache.pyRefactored get_cache_data to use flat cache directory and process files ending with _o.h5 only.
executorlib/task_scheduler/file/backend.pyUpdated backend_write_file to use _r.h5 and _o.h5 suffixes, and changed base filename slicing logic.
executorlib/task_scheduler/file/shared.pyChanged cache file handling in execute_tasks_h5 and _check_task_output to use flat structure and new suffixes.
executorlib/task_scheduler/interactive/shared.pySimplified cache existence checks and file naming in _execute_task_with_cache to match new flat structure.
tests/test_cache_backend_execute.pyUpdated test cache file paths and directory creation to match the new flat structure and file naming convention.

Sequence Diagram(s)

sequenceDiagram
participant User
participant TaskScheduler
participant CacheDirectory
participant Backend
User->>TaskScheduler: Submit task(s) with cache enabled
TaskScheduler->>CacheDirectory: Check for {task_key}_o.h5
alt Cache hit
CacheDirectory-->>TaskScheduler: Return cached result
else Cache miss
TaskScheduler->>CacheDirectory: Write {task_key}_i.h5
TaskScheduler->>Backend: Execute task
Backend->>CacheDirectory: Write {task_key}_r.h5, then rename to {task_key}_o.h5
Backend-->>TaskScheduler: Return result
end
TaskScheduler-->>User: Return result
Loading

Possibly related PRs

Poem

In the cache where files once nested deep,
Now flat and tidy, they quietly sleep.
No more subfolders, just suffixes clear—
_i.h5 and _o.h5 bring order here!
The rabbit hops by, with a satisfied grin,
For simple paths make life easy to begin.
🐇✨


📜 Recent review details

Configuration used: CodeRabbit UI
Review profile: CHILL
Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between 8281007 and ab123dc.

📒 Files selected for processing (1)
  • executorlib/task_scheduler/file/shared.py (3 hunks)
🚧 Files skipped from review as they are similar to previous changes (1)
  • executorlib/task_scheduler/file/shared.py
⏰ Context from checks skipped due to timeout of 90000ms (11)
  • GitHub Check: unittest_openmpi (ubuntu-latest, 3.13)
  • GitHub Check: benchmark (ubuntu-latest, 3.13, .ci_support/environment-openmpi.yml)
  • GitHub Check: unittest_flux_openmpi
  • GitHub Check: unittest_flux_mpich
  • GitHub Check: unittest_mpich (macos-latest, 3.13)
  • GitHub Check: benchmark (ubuntu-latest, 3.13, .ci_support/environment-mpich.yml)
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  • GitHub Check: unittest_openmpi (ubuntu-latest, 3.12)
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Actionable comments posted: 2

🧹 Nitpick comments (3)
executorlib/standalone/cache.py (1)

31-33: Filter with str.endswith + isfile to avoid opening non-files

task_key[-5:] == "_o.h5" works but is brittle and will happily treat sub-directories named foo_o.h5 as files, causing h5py.File(...) to raise.

- file_name = os.path.join(cache_directory, task_key)- if task_key[-5:] == "_o.h5":+ if task_key.endswith("_o.h5"):+ file_name = os.path.join(cache_directory, task_key)+ if not os.path.isfile(file_name):+ continue # skip dirs / special files
tests/test_cache_backend_execute.py (1)

66-68: Remove stale nested-directory creation

The new flat cache layout no longer needs <cache>/<task_key>/.
Leaving this os.makedirs is harmless but clutters the tree and could hide pathing bugs later.

- file_name = os.path.join(cache_directory, task_key + "_i.h5")- os.makedirs(os.path.join(cache_directory, task_key), exist_ok=True)+ file_name = os.path.join(cache_directory, f"{task_key}_i.h5")
executorlib/task_scheduler/file/backend.py (1)

45-46: Derive file_name_out more robustly

os.path.splitext(file_name)[0][:-2] silently chops two characters, assuming the suffix is always _i.
If the naming ever changes (e.g. _in), this will mis-slice.

-from pathlib import Path-file_name_out = os.path.splitext(file_name)[0][:-2]+from pathlib import Path+file_name_out = Path(file_name).with_suffix("").as_posix().removesuffix("_i")

Path.removesuffix (Python ≥ 3.11) or manual if base.endswith("_i"): guards make the intention explicit.
This also improves readability.

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📒 Files selected for processing (5)
  • executorlib/standalone/cache.py (1 hunks)
  • executorlib/task_scheduler/file/backend.py (1 hunks)
  • executorlib/task_scheduler/file/shared.py (3 hunks)
  • executorlib/task_scheduler/interactive/shared.py (1 hunks)
  • tests/test_cache_backend_execute.py (8 hunks)
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tests/test_cache_backend_execute.py (2)
executorlib/task_scheduler/file/hdf.py (1)
  • get_runtime (74-88)
executorlib/task_scheduler/file/shared.py (1)
  • FutureItem (14-49)
executorlib/task_scheduler/file/backend.py (1)
executorlib/task_scheduler/file/hdf.py (1)
  • dump (10-25)
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Comment on lines +154 to +156
os.makedirs(cache_directory, exist_ok=True)
file_name = os.path.join(cache_directory, task_key + "_o.h5")
if task_key + "_o.h5" not in os.listdir(cache_directory):

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🛠️ Refactor suggestion

Prefer os.path.exists() over directory scans for existence checks

Using task_key + "_o.h5" not in os.listdir(cache_directory) forces a full directory listing on every call.
os.path.exists(file_name) (or Path(file_name).exists()) is:

  1. O(1) rather than O(n) on large cache dirs.
  2. Immune to race conditions where a file is created between listdir() and the subsequent logic.
  3. Clearer to read.
- file_name = os.path.join(cache_directory, task_key + "_o.h5")- if task_key + "_o.h5" not in os.listdir(cache_directory):+ file_name = os.path.join(cache_directory, f"{task_key}_o.h5")+ if not os.path.exists(file_name):
📝 Committable suggestion

‼️IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, task_key+"_o.h5")
iftask_key+"_o.h5"notinos.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, f"{task_key}_o.h5")
ifnotos.path.exists(file_name):
🤖 Prompt for AI Agents
In executorlib/task_scheduler/interactive/shared.py around lines 154 to 156,
replace the check using 'task_key + "_o.h5" not in os.listdir(cache_directory)'
with 'not os.path.exists(file_name)'. This avoids scanning the entire directory,
improves performance, prevents race conditions, and makes the code clearer by
directly checking the file's existence.

Comment on lines +111 to 114
if task_key + "_o.h5" not in os.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name = os.path.join(cache_directory, task_key + "_i.h5")
dump(file_name=file_name, data_dict=data_dict)

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🛠️ Refactor suggestion

Use exists() instead of scanning the directory for every task

Similar to the interactive path, scanning os.listdir(cache_directory) for each task does an unnecessary O(n) walk and risks TOCTOU issues.

- if task_key + "_o.h5" not in os.listdir(cache_directory):+ output_path = os.path.join(cache_directory, f"{task_key}_o.h5")+ if not os.path.exists(output_path):

You already compute the same path a few lines later; reuse it to keep the logic DRY.

📝 Committable suggestion

‼️IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
iftask_key+"_o.h5"notinos.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, task_key+"_i.h5")
dump(file_name=file_name, data_dict=data_dict)
# check for the output file directly rather than listing the whole directory
output_path=os.path.join(cache_directory, f"{task_key}_o.h5")
ifnotos.path.exists(output_path):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, f"{task_key}_i.h5")
dump(file_name=file_name, data_dict=data_dict)
🤖 Prompt for AI Agents
In executorlib/task_scheduler/file/shared.py around lines 111 to 114, replace
the check that scans os.listdir(cache_directory) with a direct file existence
check using os.path.exists() for the target file to avoid inefficient directory
scans and TOCTOU issues. Also, reuse the computed file path variable instead of
reconstructing it to keep the code DRY.

@codecov

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Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 96.78%. Comparing base (c81d7a2) to head (ab123dc).
Report is 4 commits behind head on main.

Additional details and impacted files
@@ Coverage Diff @@## main #681 +/- ##
==========================================
- Coverage 96.78% 96.78% -0.01% 
==========================================
Files 29 29 Lines 1307 1306 -1 ==========================================
- Hits 1265 1264 -1 
Misses 42 42 

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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Force GitHub README to respect dark mode\n(function() {\n var style = document.createElement('style');\n style.textContent = '\n .markdown-body {\n color-scheme: dark light;\n }\n .markdown-body pre { background: #161b22 !important; }\n .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }\n .markdown-body table th, .markdown-body table td { border-color: #30363d !important; }\n .markdown-body img { background: #0d1117; }\n .markdown-body blockquote { border-left-color: #8b949e; }\n .markdown-body hr { border-color: #30363d; }\n ';\n document.head.appendChild(style);\n})();", "GitHub Dark Mode README Fix"); } } catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
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[Feature] More efficient cache directory structure - #681

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jan-janssen merged 8 commits into
mainfrom
cache_red
Jun 14, 2025
Merged

[Feature] More efficient cache directory structure#681
jan-janssen merged 8 commits into
mainfrom
cache_red

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@jan-janssen

@jan-janssenjan-janssen commented Jun 14, 2025

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Summary by CodeRabbit

  • Refactor
    • Simplified cache file naming and directory structure from nested directories with fixed filenames to a flat directory using task-specific suffixes (e.g., _i.h5, _o.h5).
    • Updated logic for reading, writing, and checking cache files to match the new naming convention.
  • Tests
    • Adjusted test cases to use the new flat cache file structure and naming scheme.

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Walkthrough

This change refactors the cache file naming and directory structure across multiple modules. It replaces nested directories and fixed filenames with a flat directory structure, using task-key-based filenames with _i.h5 and _o.h5 suffixes for input and output cache files. All affected functions and tests are updated accordingly.

Changes

File(s)Change Summary
executorlib/standalone/cache.pyRefactored get_cache_data to use flat cache directory and process files ending with _o.h5 only.
executorlib/task_scheduler/file/backend.pyUpdated backend_write_file to use _r.h5 and _o.h5 suffixes, and changed base filename slicing logic.
executorlib/task_scheduler/file/shared.pyChanged cache file handling in execute_tasks_h5 and _check_task_output to use flat structure and new suffixes.
executorlib/task_scheduler/interactive/shared.pySimplified cache existence checks and file naming in _execute_task_with_cache to match new flat structure.
tests/test_cache_backend_execute.pyUpdated test cache file paths and directory creation to match the new flat structure and file naming convention.

Sequence Diagram(s)

sequenceDiagram
participant User
participant TaskScheduler
participant CacheDirectory
participant Backend
User->>TaskScheduler: Submit task(s) with cache enabled
TaskScheduler->>CacheDirectory: Check for {task_key}_o.h5
alt Cache hit
CacheDirectory-->>TaskScheduler: Return cached result
else Cache miss
TaskScheduler->>CacheDirectory: Write {task_key}_i.h5
TaskScheduler->>Backend: Execute task
Backend->>CacheDirectory: Write {task_key}_r.h5, then rename to {task_key}_o.h5
Backend-->>TaskScheduler: Return result
end
TaskScheduler-->>User: Return result
Loading

Possibly related PRs

Poem

In the cache where files once nested deep,
Now flat and tidy, they quietly sleep.
No more subfolders, just suffixes clear—
_i.h5 and _o.h5 bring order here!
The rabbit hops by, with a satisfied grin,
For simple paths make life easy to begin.
🐇✨


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Actionable comments posted: 2

🧹 Nitpick comments (3)
executorlib/standalone/cache.py (1)

31-33: Filter with str.endswith + isfile to avoid opening non-files

task_key[-5:] == "_o.h5" works but is brittle and will happily treat sub-directories named foo_o.h5 as files, causing h5py.File(...) to raise.

- file_name = os.path.join(cache_directory, task_key)- if task_key[-5:] == "_o.h5":+ if task_key.endswith("_o.h5"):+ file_name = os.path.join(cache_directory, task_key)+ if not os.path.isfile(file_name):+ continue # skip dirs / special files
tests/test_cache_backend_execute.py (1)

66-68: Remove stale nested-directory creation

The new flat cache layout no longer needs <cache>/<task_key>/.
Leaving this os.makedirs is harmless but clutters the tree and could hide pathing bugs later.

- file_name = os.path.join(cache_directory, task_key + "_i.h5")- os.makedirs(os.path.join(cache_directory, task_key), exist_ok=True)+ file_name = os.path.join(cache_directory, f"{task_key}_i.h5")
executorlib/task_scheduler/file/backend.py (1)

45-46: Derive file_name_out more robustly

os.path.splitext(file_name)[0][:-2] silently chops two characters, assuming the suffix is always _i.
If the naming ever changes (e.g. _in), this will mis-slice.

-from pathlib import Path-file_name_out = os.path.splitext(file_name)[0][:-2]+from pathlib import Path+file_name_out = Path(file_name).with_suffix("").as_posix().removesuffix("_i")

Path.removesuffix (Python ≥ 3.11) or manual if base.endswith("_i"): guards make the intention explicit.
This also improves readability.

📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL
Plan: Pro

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Reviewing files that changed from the base of the PR and between 4d2dd17 and 8281007.

📒 Files selected for processing (5)
  • executorlib/standalone/cache.py (1 hunks)
  • executorlib/task_scheduler/file/backend.py (1 hunks)
  • executorlib/task_scheduler/file/shared.py (3 hunks)
  • executorlib/task_scheduler/interactive/shared.py (1 hunks)
  • tests/test_cache_backend_execute.py (8 hunks)
🧰 Additional context used
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tests/test_cache_backend_execute.py (2)
executorlib/task_scheduler/file/hdf.py (1)
  • get_runtime (74-88)
executorlib/task_scheduler/file/shared.py (1)
  • FutureItem (14-49)
executorlib/task_scheduler/file/backend.py (1)
executorlib/task_scheduler/file/hdf.py (1)
  • dump (10-25)
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Comment on lines +154 to +156
os.makedirs(cache_directory, exist_ok=True)
file_name = os.path.join(cache_directory, task_key + "_o.h5")
if task_key + "_o.h5" not in os.listdir(cache_directory):

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🛠️ Refactor suggestion

Prefer os.path.exists() over directory scans for existence checks

Using task_key + "_o.h5" not in os.listdir(cache_directory) forces a full directory listing on every call.
os.path.exists(file_name) (or Path(file_name).exists()) is:

  1. O(1) rather than O(n) on large cache dirs.
  2. Immune to race conditions where a file is created between listdir() and the subsequent logic.
  3. Clearer to read.
- file_name = os.path.join(cache_directory, task_key + "_o.h5")- if task_key + "_o.h5" not in os.listdir(cache_directory):+ file_name = os.path.join(cache_directory, f"{task_key}_o.h5")+ if not os.path.exists(file_name):
📝 Committable suggestion

‼️IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, task_key+"_o.h5")
iftask_key+"_o.h5"notinos.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, f"{task_key}_o.h5")
ifnotos.path.exists(file_name):
🤖 Prompt for AI Agents
In executorlib/task_scheduler/interactive/shared.py around lines 154 to 156,
replace the check using 'task_key + "_o.h5" not in os.listdir(cache_directory)'
with 'not os.path.exists(file_name)'. This avoids scanning the entire directory,
improves performance, prevents race conditions, and makes the code clearer by
directly checking the file's existence.

Comment on lines +111 to 114
if task_key + "_o.h5" not in os.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name = os.path.join(cache_directory, task_key + "_i.h5")
dump(file_name=file_name, data_dict=data_dict)

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🛠️ Refactor suggestion

Use exists() instead of scanning the directory for every task

Similar to the interactive path, scanning os.listdir(cache_directory) for each task does an unnecessary O(n) walk and risks TOCTOU issues.

- if task_key + "_o.h5" not in os.listdir(cache_directory):+ output_path = os.path.join(cache_directory, f"{task_key}_o.h5")+ if not os.path.exists(output_path):

You already compute the same path a few lines later; reuse it to keep the logic DRY.

📝 Committable suggestion

‼️IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
iftask_key+"_o.h5"notinos.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, task_key+"_i.h5")
dump(file_name=file_name, data_dict=data_dict)
# check for the output file directly rather than listing the whole directory
output_path=os.path.join(cache_directory, f"{task_key}_o.h5")
ifnotos.path.exists(output_path):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, f"{task_key}_i.h5")
dump(file_name=file_name, data_dict=data_dict)
🤖 Prompt for AI Agents
In executorlib/task_scheduler/file/shared.py around lines 111 to 114, replace
the check that scans os.listdir(cache_directory) with a direct file existence
check using os.path.exists() for the target file to avoid inefficient directory
scans and TOCTOU issues. Also, reuse the computed file path variable instead of
reconstructing it to keep the code DRY.

@codecov

codecovBot commented Jun 14, 2025

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Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 96.78%. Comparing base (c81d7a2) to head (ab123dc).
Report is 4 commits behind head on main.

Additional details and impacted files
@@ Coverage Diff @@## main #681 +/- ##
==========================================
- Coverage 96.78% 96.78% -0.01% 
==========================================
Files 29 29 Lines 1307 1306 -1 ==========================================
- Hits 1265 1264 -1 
Misses 42 42 

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:
  • ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Highlight search terms from Google/DuckDuckGo/Bing referrer\n(function() {\n var ref = document.referrer;\n var terms = [];\n \n if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {\n var url = new URL(ref);\n var q = url.searchParams.get('q') || url.searchParams.get('p');\n if (q) {\n terms = q.split(/\\s+/).filter(function(t) { return t.length > 2; });\n }\n }\n \n if (terms.length === 0) return;\n \n var style = document.createElement('style');\n style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';\n document.head.appendChild(style);\n \n function highlight(node) {\n if (node.nodeType === 3) { // text node\n var text = node.textContent;\n var found = false;\n terms.forEach(function(term) {\n var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\\]\\\\]/g, '\\\\') + ')', 'gi');\n if (regex.test(text)) {\n found = true;\n var frag = document.createDocumentFragment();\n var parts = text.split(regex);\n parts.forEach(function(part, i) {\n if (i % 2 === 0) {\n frag.appendChild(document.createTextNode(part));\n } else {\n var span = document.createElement('span');\n span.className = 'userscript-highlight';\n span.textContent = part;\n frag.appendChild(span);\n }\n });\n node.parentNode.replaceChild(frag, node);\n }\n });\n } else if (node.nodeType === 1 && node.childNodes) { // element\n var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];\n if (!skipTags.includes(node.tagName)) {\n Array.from(node.childNodes).forEach(highlight);\n }\n }\n }\n \n highlight(document.body);\n \n // Re-highlight on dynamic content\n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1 || node.nodeType === 3) highlight(node);\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Highlight Search Terms"); } } catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
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[Feature] More efficient cache directory structure - #681

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jan-janssen merged 8 commits into
mainfrom
cache_red
Jun 14, 2025
Merged

[Feature] More efficient cache directory structure#681
jan-janssen merged 8 commits into
mainfrom
cache_red

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@jan-janssen

@jan-janssenjan-janssen commented Jun 14, 2025

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Summary by CodeRabbit

  • Refactor
    • Simplified cache file naming and directory structure from nested directories with fixed filenames to a flat directory using task-specific suffixes (e.g., _i.h5, _o.h5).
    • Updated logic for reading, writing, and checking cache files to match the new naming convention.
  • Tests
    • Adjusted test cases to use the new flat cache file structure and naming scheme.

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Walkthrough

This change refactors the cache file naming and directory structure across multiple modules. It replaces nested directories and fixed filenames with a flat directory structure, using task-key-based filenames with _i.h5 and _o.h5 suffixes for input and output cache files. All affected functions and tests are updated accordingly.

Changes

File(s)Change Summary
executorlib/standalone/cache.pyRefactored get_cache_data to use flat cache directory and process files ending with _o.h5 only.
executorlib/task_scheduler/file/backend.pyUpdated backend_write_file to use _r.h5 and _o.h5 suffixes, and changed base filename slicing logic.
executorlib/task_scheduler/file/shared.pyChanged cache file handling in execute_tasks_h5 and _check_task_output to use flat structure and new suffixes.
executorlib/task_scheduler/interactive/shared.pySimplified cache existence checks and file naming in _execute_task_with_cache to match new flat structure.
tests/test_cache_backend_execute.pyUpdated test cache file paths and directory creation to match the new flat structure and file naming convention.

Sequence Diagram(s)

sequenceDiagram
participant User
participant TaskScheduler
participant CacheDirectory
participant Backend
User->>TaskScheduler: Submit task(s) with cache enabled
TaskScheduler->>CacheDirectory: Check for {task_key}_o.h5
alt Cache hit
CacheDirectory-->>TaskScheduler: Return cached result
else Cache miss
TaskScheduler->>CacheDirectory: Write {task_key}_i.h5
TaskScheduler->>Backend: Execute task
Backend->>CacheDirectory: Write {task_key}_r.h5, then rename to {task_key}_o.h5
Backend-->>TaskScheduler: Return result
end
TaskScheduler-->>User: Return result
Loading

Possibly related PRs

Poem

In the cache where files once nested deep,
Now flat and tidy, they quietly sleep.
No more subfolders, just suffixes clear—
_i.h5 and _o.h5 bring order here!
The rabbit hops by, with a satisfied grin,
For simple paths make life easy to begin.
🐇✨


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Actionable comments posted: 2

🧹 Nitpick comments (3)
executorlib/standalone/cache.py (1)

31-33: Filter with str.endswith + isfile to avoid opening non-files

task_key[-5:] == "_o.h5" works but is brittle and will happily treat sub-directories named foo_o.h5 as files, causing h5py.File(...) to raise.

- file_name = os.path.join(cache_directory, task_key)- if task_key[-5:] == "_o.h5":+ if task_key.endswith("_o.h5"):+ file_name = os.path.join(cache_directory, task_key)+ if not os.path.isfile(file_name):+ continue # skip dirs / special files
tests/test_cache_backend_execute.py (1)

66-68: Remove stale nested-directory creation

The new flat cache layout no longer needs <cache>/<task_key>/.
Leaving this os.makedirs is harmless but clutters the tree and could hide pathing bugs later.

- file_name = os.path.join(cache_directory, task_key + "_i.h5")- os.makedirs(os.path.join(cache_directory, task_key), exist_ok=True)+ file_name = os.path.join(cache_directory, f"{task_key}_i.h5")
executorlib/task_scheduler/file/backend.py (1)

45-46: Derive file_name_out more robustly

os.path.splitext(file_name)[0][:-2] silently chops two characters, assuming the suffix is always _i.
If the naming ever changes (e.g. _in), this will mis-slice.

-from pathlib import Path-file_name_out = os.path.splitext(file_name)[0][:-2]+from pathlib import Path+file_name_out = Path(file_name).with_suffix("").as_posix().removesuffix("_i")

Path.removesuffix (Python ≥ 3.11) or manual if base.endswith("_i"): guards make the intention explicit.
This also improves readability.

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Reviewing files that changed from the base of the PR and between 4d2dd17 and 8281007.

📒 Files selected for processing (5)
  • executorlib/standalone/cache.py (1 hunks)
  • executorlib/task_scheduler/file/backend.py (1 hunks)
  • executorlib/task_scheduler/file/shared.py (3 hunks)
  • executorlib/task_scheduler/interactive/shared.py (1 hunks)
  • tests/test_cache_backend_execute.py (8 hunks)
🧰 Additional context used
🧬 Code Graph Analysis (2)
tests/test_cache_backend_execute.py (2)
executorlib/task_scheduler/file/hdf.py (1)
  • get_runtime (74-88)
executorlib/task_scheduler/file/shared.py (1)
  • FutureItem (14-49)
executorlib/task_scheduler/file/backend.py (1)
executorlib/task_scheduler/file/hdf.py (1)
  • dump (10-25)
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Comment on lines +154 to +156
os.makedirs(cache_directory, exist_ok=True)
file_name = os.path.join(cache_directory, task_key + "_o.h5")
if task_key + "_o.h5" not in os.listdir(cache_directory):

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🛠️ Refactor suggestion

Prefer os.path.exists() over directory scans for existence checks

Using task_key + "_o.h5" not in os.listdir(cache_directory) forces a full directory listing on every call.
os.path.exists(file_name) (or Path(file_name).exists()) is:

  1. O(1) rather than O(n) on large cache dirs.
  2. Immune to race conditions where a file is created between listdir() and the subsequent logic.
  3. Clearer to read.
- file_name = os.path.join(cache_directory, task_key + "_o.h5")- if task_key + "_o.h5" not in os.listdir(cache_directory):+ file_name = os.path.join(cache_directory, f"{task_key}_o.h5")+ if not os.path.exists(file_name):
📝 Committable suggestion

‼️IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, task_key+"_o.h5")
iftask_key+"_o.h5"notinos.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, f"{task_key}_o.h5")
ifnotos.path.exists(file_name):
🤖 Prompt for AI Agents
In executorlib/task_scheduler/interactive/shared.py around lines 154 to 156,
replace the check using 'task_key + "_o.h5" not in os.listdir(cache_directory)'
with 'not os.path.exists(file_name)'. This avoids scanning the entire directory,
improves performance, prevents race conditions, and makes the code clearer by
directly checking the file's existence.

Comment on lines +111 to 114
if task_key + "_o.h5" not in os.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name = os.path.join(cache_directory, task_key + "_i.h5")
dump(file_name=file_name, data_dict=data_dict)

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🛠️ Refactor suggestion

Use exists() instead of scanning the directory for every task

Similar to the interactive path, scanning os.listdir(cache_directory) for each task does an unnecessary O(n) walk and risks TOCTOU issues.

- if task_key + "_o.h5" not in os.listdir(cache_directory):+ output_path = os.path.join(cache_directory, f"{task_key}_o.h5")+ if not os.path.exists(output_path):

You already compute the same path a few lines later; reuse it to keep the logic DRY.

📝 Committable suggestion

‼️IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
iftask_key+"_o.h5"notinos.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, task_key+"_i.h5")
dump(file_name=file_name, data_dict=data_dict)
# check for the output file directly rather than listing the whole directory
output_path=os.path.join(cache_directory, f"{task_key}_o.h5")
ifnotos.path.exists(output_path):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, f"{task_key}_i.h5")
dump(file_name=file_name, data_dict=data_dict)
🤖 Prompt for AI Agents
In executorlib/task_scheduler/file/shared.py around lines 111 to 114, replace
the check that scans os.listdir(cache_directory) with a direct file existence
check using os.path.exists() for the target file to avoid inefficient directory
scans and TOCTOU issues. Also, reuse the computed file path variable instead of
reconstructing it to keep the code DRY.

@codecov

codecovBot commented Jun 14, 2025

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Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 96.78%. Comparing base (c81d7a2) to head (ab123dc).
Report is 4 commits behind head on main.

Additional details and impacted files
@@ Coverage Diff @@## main #681 +/- ##
==========================================
- Coverage 96.78% 96.78% -0.01% 
==========================================
Files 29 29 Lines 1307 1306 -1 ==========================================
- Hits 1265 1264 -1 
Misses 42 42 

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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Strip utm_, fbclid, gclid, etc. from all links on page\n(function() {\n var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',\n 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',\n 'ref', 'ref_src', 'source', 'medium', 'campaign'];\n \n function cleanUrl(url) {\n try {\n var u = new URL(url, window.location.origin);\n var changed = false;\n trackingParams.forEach(function(p) {\n if (u.searchParams.has(p)) {\n u.searchParams.delete(p);\n changed = true;\n }\n });\n return changed ? u.toString() : url;\n } catch (e) {\n return url;\n }\n }\n \n function cleanLinks() {\n document.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n \n cleanLinks();\n \n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1) {\n if (node.tagName === 'A') cleanLinks();\n node.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Remove Tracking Parameters from Links"); } } catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); } })(); (function(){ try { var __m = "youtube.com"; var __re = new RegExp('^' + "youtube\\.com" + '
Skip to content

[Feature] More efficient cache directory structure - #681

Merged
jan-janssen merged 8 commits into
mainfrom
cache_red
Jun 14, 2025
Merged

[Feature] More efficient cache directory structure#681
jan-janssen merged 8 commits into
mainfrom
cache_red

Conversation

@jan-janssen

@jan-janssenjan-janssen commented Jun 14, 2025

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Summary by CodeRabbit

  • Refactor
    • Simplified cache file naming and directory structure from nested directories with fixed filenames to a flat directory using task-specific suffixes (e.g., _i.h5, _o.h5).
    • Updated logic for reading, writing, and checking cache files to match the new naming convention.
  • Tests
    • Adjusted test cases to use the new flat cache file structure and naming scheme.

@coderabbitai

coderabbitaiBot commented Jun 14, 2025

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Walkthrough

This change refactors the cache file naming and directory structure across multiple modules. It replaces nested directories and fixed filenames with a flat directory structure, using task-key-based filenames with _i.h5 and _o.h5 suffixes for input and output cache files. All affected functions and tests are updated accordingly.

Changes

File(s)Change Summary
executorlib/standalone/cache.pyRefactored get_cache_data to use flat cache directory and process files ending with _o.h5 only.
executorlib/task_scheduler/file/backend.pyUpdated backend_write_file to use _r.h5 and _o.h5 suffixes, and changed base filename slicing logic.
executorlib/task_scheduler/file/shared.pyChanged cache file handling in execute_tasks_h5 and _check_task_output to use flat structure and new suffixes.
executorlib/task_scheduler/interactive/shared.pySimplified cache existence checks and file naming in _execute_task_with_cache to match new flat structure.
tests/test_cache_backend_execute.pyUpdated test cache file paths and directory creation to match the new flat structure and file naming convention.

Sequence Diagram(s)

sequenceDiagram
participant User
participant TaskScheduler
participant CacheDirectory
participant Backend
User->>TaskScheduler: Submit task(s) with cache enabled
TaskScheduler->>CacheDirectory: Check for {task_key}_o.h5
alt Cache hit
CacheDirectory-->>TaskScheduler: Return cached result
else Cache miss
TaskScheduler->>CacheDirectory: Write {task_key}_i.h5
TaskScheduler->>Backend: Execute task
Backend->>CacheDirectory: Write {task_key}_r.h5, then rename to {task_key}_o.h5
Backend-->>TaskScheduler: Return result
end
TaskScheduler-->>User: Return result
Loading

Possibly related PRs

Poem

In the cache where files once nested deep,
Now flat and tidy, they quietly sleep.
No more subfolders, just suffixes clear—
_i.h5 and _o.h5 bring order here!
The rabbit hops by, with a satisfied grin,
For simple paths make life easy to begin.
🐇✨


📜 Recent review details

Configuration used: CodeRabbit UI
Review profile: CHILL
Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between 8281007 and ab123dc.

📒 Files selected for processing (1)
  • executorlib/task_scheduler/file/shared.py (3 hunks)
🚧 Files skipped from review as they are similar to previous changes (1)
  • executorlib/task_scheduler/file/shared.py
⏰ Context from checks skipped due to timeout of 90000ms (11)
  • GitHub Check: unittest_openmpi (ubuntu-latest, 3.13)
  • GitHub Check: benchmark (ubuntu-latest, 3.13, .ci_support/environment-openmpi.yml)
  • GitHub Check: unittest_flux_openmpi
  • GitHub Check: unittest_flux_mpich
  • GitHub Check: unittest_mpich (macos-latest, 3.13)
  • GitHub Check: benchmark (ubuntu-latest, 3.13, .ci_support/environment-mpich.yml)
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  • GitHub Check: unittest_openmpi (ubuntu-latest, 3.12)
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Actionable comments posted: 2

🧹 Nitpick comments (3)
executorlib/standalone/cache.py (1)

31-33: Filter with str.endswith + isfile to avoid opening non-files

task_key[-5:] == "_o.h5" works but is brittle and will happily treat sub-directories named foo_o.h5 as files, causing h5py.File(...) to raise.

- file_name = os.path.join(cache_directory, task_key)- if task_key[-5:] == "_o.h5":+ if task_key.endswith("_o.h5"):+ file_name = os.path.join(cache_directory, task_key)+ if not os.path.isfile(file_name):+ continue # skip dirs / special files
tests/test_cache_backend_execute.py (1)

66-68: Remove stale nested-directory creation

The new flat cache layout no longer needs <cache>/<task_key>/.
Leaving this os.makedirs is harmless but clutters the tree and could hide pathing bugs later.

- file_name = os.path.join(cache_directory, task_key + "_i.h5")- os.makedirs(os.path.join(cache_directory, task_key), exist_ok=True)+ file_name = os.path.join(cache_directory, f"{task_key}_i.h5")
executorlib/task_scheduler/file/backend.py (1)

45-46: Derive file_name_out more robustly

os.path.splitext(file_name)[0][:-2] silently chops two characters, assuming the suffix is always _i.
If the naming ever changes (e.g. _in), this will mis-slice.

-from pathlib import Path-file_name_out = os.path.splitext(file_name)[0][:-2]+from pathlib import Path+file_name_out = Path(file_name).with_suffix("").as_posix().removesuffix("_i")

Path.removesuffix (Python ≥ 3.11) or manual if base.endswith("_i"): guards make the intention explicit.
This also improves readability.

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  • executorlib/task_scheduler/file/backend.py (1 hunks)
  • executorlib/task_scheduler/file/shared.py (3 hunks)
  • executorlib/task_scheduler/interactive/shared.py (1 hunks)
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tests/test_cache_backend_execute.py (2)
executorlib/task_scheduler/file/hdf.py (1)
  • get_runtime (74-88)
executorlib/task_scheduler/file/shared.py (1)
  • FutureItem (14-49)
executorlib/task_scheduler/file/backend.py (1)
executorlib/task_scheduler/file/hdf.py (1)
  • dump (10-25)
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Comment on lines +154 to +156
os.makedirs(cache_directory, exist_ok=True)
file_name = os.path.join(cache_directory, task_key + "_o.h5")
if task_key + "_o.h5" not in os.listdir(cache_directory):

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🛠️ Refactor suggestion

Prefer os.path.exists() over directory scans for existence checks

Using task_key + "_o.h5" not in os.listdir(cache_directory) forces a full directory listing on every call.
os.path.exists(file_name) (or Path(file_name).exists()) is:

  1. O(1) rather than O(n) on large cache dirs.
  2. Immune to race conditions where a file is created between listdir() and the subsequent logic.
  3. Clearer to read.
- file_name = os.path.join(cache_directory, task_key + "_o.h5")- if task_key + "_o.h5" not in os.listdir(cache_directory):+ file_name = os.path.join(cache_directory, f"{task_key}_o.h5")+ if not os.path.exists(file_name):
📝 Committable suggestion

‼️IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, task_key+"_o.h5")
iftask_key+"_o.h5"notinos.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, f"{task_key}_o.h5")
ifnotos.path.exists(file_name):
🤖 Prompt for AI Agents
In executorlib/task_scheduler/interactive/shared.py around lines 154 to 156,
replace the check using 'task_key + "_o.h5" not in os.listdir(cache_directory)'
with 'not os.path.exists(file_name)'. This avoids scanning the entire directory,
improves performance, prevents race conditions, and makes the code clearer by
directly checking the file's existence.

Comment on lines +111 to 114
if task_key + "_o.h5" not in os.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name = os.path.join(cache_directory, task_key + "_i.h5")
dump(file_name=file_name, data_dict=data_dict)

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🛠️ Refactor suggestion

Use exists() instead of scanning the directory for every task

Similar to the interactive path, scanning os.listdir(cache_directory) for each task does an unnecessary O(n) walk and risks TOCTOU issues.

- if task_key + "_o.h5" not in os.listdir(cache_directory):+ output_path = os.path.join(cache_directory, f"{task_key}_o.h5")+ if not os.path.exists(output_path):

You already compute the same path a few lines later; reuse it to keep the logic DRY.

📝 Committable suggestion

‼️IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
iftask_key+"_o.h5"notinos.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, task_key+"_i.h5")
dump(file_name=file_name, data_dict=data_dict)
# check for the output file directly rather than listing the whole directory
output_path=os.path.join(cache_directory, f"{task_key}_o.h5")
ifnotos.path.exists(output_path):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, f"{task_key}_i.h5")
dump(file_name=file_name, data_dict=data_dict)
🤖 Prompt for AI Agents
In executorlib/task_scheduler/file/shared.py around lines 111 to 114, replace
the check that scans os.listdir(cache_directory) with a direct file existence
check using os.path.exists() for the target file to avoid inefficient directory
scans and TOCTOU issues. Also, reuse the computed file path variable instead of
reconstructing it to keep the code DRY.

@codecov

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Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 96.78%. Comparing base (c81d7a2) to head (ab123dc).
Report is 4 commits behind head on main.

Additional details and impacted files
@@ Coverage Diff @@## main #681 +/- ##
==========================================
- Coverage 96.78% 96.78% -0.01% 
==========================================
Files 29 29 Lines 1307 1306 -1 ==========================================
- Hits 1265 1264 -1 
Misses 42 42 

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@jan-janssen
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Auto-enable theater mode on YouTube\n(function() {\n function tryTheater() {\n var btn = document.querySelector('button[aria-label=\"Theater mode\"], ytd-player #player button[title=\"Theater mode\"]');\n if (btn && !btn.classList.contains('activated')) {\n btn.click();\n }\n }\n \n // Try immediately\n tryTheater();\n \n // Try after navigation (SPA)\n var lastUrl = location.href;\n setInterval(function() {\n if (location.href !== lastUrl) {\n lastUrl = location.href;\n setTimeout(tryTheater, 500);\n }\n }, 1000);\n \n // Also try on player load\n var observer = new MutationObserver(tryTheater);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "YouTube Theater Mode Default"); } } catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
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[Feature] More efficient cache directory structure - #681

Merged
jan-janssen merged 8 commits into
mainfrom
cache_red
Jun 14, 2025
Merged

[Feature] More efficient cache directory structure#681
jan-janssen merged 8 commits into
mainfrom
cache_red

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@jan-janssen

@jan-janssenjan-janssen commented Jun 14, 2025

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Summary by CodeRabbit

  • Refactor
    • Simplified cache file naming and directory structure from nested directories with fixed filenames to a flat directory using task-specific suffixes (e.g., _i.h5, _o.h5).
    • Updated logic for reading, writing, and checking cache files to match the new naming convention.
  • Tests
    • Adjusted test cases to use the new flat cache file structure and naming scheme.

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Walkthrough

This change refactors the cache file naming and directory structure across multiple modules. It replaces nested directories and fixed filenames with a flat directory structure, using task-key-based filenames with _i.h5 and _o.h5 suffixes for input and output cache files. All affected functions and tests are updated accordingly.

Changes

File(s)Change Summary
executorlib/standalone/cache.pyRefactored get_cache_data to use flat cache directory and process files ending with _o.h5 only.
executorlib/task_scheduler/file/backend.pyUpdated backend_write_file to use _r.h5 and _o.h5 suffixes, and changed base filename slicing logic.
executorlib/task_scheduler/file/shared.pyChanged cache file handling in execute_tasks_h5 and _check_task_output to use flat structure and new suffixes.
executorlib/task_scheduler/interactive/shared.pySimplified cache existence checks and file naming in _execute_task_with_cache to match new flat structure.
tests/test_cache_backend_execute.pyUpdated test cache file paths and directory creation to match the new flat structure and file naming convention.

Sequence Diagram(s)

sequenceDiagram
participant User
participant TaskScheduler
participant CacheDirectory
participant Backend
User->>TaskScheduler: Submit task(s) with cache enabled
TaskScheduler->>CacheDirectory: Check for {task_key}_o.h5
alt Cache hit
CacheDirectory-->>TaskScheduler: Return cached result
else Cache miss
TaskScheduler->>CacheDirectory: Write {task_key}_i.h5
TaskScheduler->>Backend: Execute task
Backend->>CacheDirectory: Write {task_key}_r.h5, then rename to {task_key}_o.h5
Backend-->>TaskScheduler: Return result
end
TaskScheduler-->>User: Return result
Loading

Possibly related PRs

Poem

In the cache where files once nested deep,
Now flat and tidy, they quietly sleep.
No more subfolders, just suffixes clear—
_i.h5 and _o.h5 bring order here!
The rabbit hops by, with a satisfied grin,
For simple paths make life easy to begin.
🐇✨


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Actionable comments posted: 2

🧹 Nitpick comments (3)
executorlib/standalone/cache.py (1)

31-33: Filter with str.endswith + isfile to avoid opening non-files

task_key[-5:] == "_o.h5" works but is brittle and will happily treat sub-directories named foo_o.h5 as files, causing h5py.File(...) to raise.

- file_name = os.path.join(cache_directory, task_key)- if task_key[-5:] == "_o.h5":+ if task_key.endswith("_o.h5"):+ file_name = os.path.join(cache_directory, task_key)+ if not os.path.isfile(file_name):+ continue # skip dirs / special files
tests/test_cache_backend_execute.py (1)

66-68: Remove stale nested-directory creation

The new flat cache layout no longer needs <cache>/<task_key>/.
Leaving this os.makedirs is harmless but clutters the tree and could hide pathing bugs later.

- file_name = os.path.join(cache_directory, task_key + "_i.h5")- os.makedirs(os.path.join(cache_directory, task_key), exist_ok=True)+ file_name = os.path.join(cache_directory, f"{task_key}_i.h5")
executorlib/task_scheduler/file/backend.py (1)

45-46: Derive file_name_out more robustly

os.path.splitext(file_name)[0][:-2] silently chops two characters, assuming the suffix is always _i.
If the naming ever changes (e.g. _in), this will mis-slice.

-from pathlib import Path-file_name_out = os.path.splitext(file_name)[0][:-2]+from pathlib import Path+file_name_out = Path(file_name).with_suffix("").as_posix().removesuffix("_i")

Path.removesuffix (Python ≥ 3.11) or manual if base.endswith("_i"): guards make the intention explicit.
This also improves readability.

📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL
Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between 4d2dd17 and 8281007.

📒 Files selected for processing (5)
  • executorlib/standalone/cache.py (1 hunks)
  • executorlib/task_scheduler/file/backend.py (1 hunks)
  • executorlib/task_scheduler/file/shared.py (3 hunks)
  • executorlib/task_scheduler/interactive/shared.py (1 hunks)
  • tests/test_cache_backend_execute.py (8 hunks)
🧰 Additional context used
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tests/test_cache_backend_execute.py (2)
executorlib/task_scheduler/file/hdf.py (1)
  • get_runtime (74-88)
executorlib/task_scheduler/file/shared.py (1)
  • FutureItem (14-49)
executorlib/task_scheduler/file/backend.py (1)
executorlib/task_scheduler/file/hdf.py (1)
  • dump (10-25)
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Comment on lines +154 to +156
os.makedirs(cache_directory, exist_ok=True)
file_name = os.path.join(cache_directory, task_key + "_o.h5")
if task_key + "_o.h5" not in os.listdir(cache_directory):

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🛠️ Refactor suggestion

Prefer os.path.exists() over directory scans for existence checks

Using task_key + "_o.h5" not in os.listdir(cache_directory) forces a full directory listing on every call.
os.path.exists(file_name) (or Path(file_name).exists()) is:

  1. O(1) rather than O(n) on large cache dirs.
  2. Immune to race conditions where a file is created between listdir() and the subsequent logic.
  3. Clearer to read.
- file_name = os.path.join(cache_directory, task_key + "_o.h5")- if task_key + "_o.h5" not in os.listdir(cache_directory):+ file_name = os.path.join(cache_directory, f"{task_key}_o.h5")+ if not os.path.exists(file_name):
📝 Committable suggestion

‼️IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, task_key+"_o.h5")
iftask_key+"_o.h5"notinos.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, f"{task_key}_o.h5")
ifnotos.path.exists(file_name):
🤖 Prompt for AI Agents
In executorlib/task_scheduler/interactive/shared.py around lines 154 to 156,
replace the check using 'task_key + "_o.h5" not in os.listdir(cache_directory)'
with 'not os.path.exists(file_name)'. This avoids scanning the entire directory,
improves performance, prevents race conditions, and makes the code clearer by
directly checking the file's existence.

Comment on lines +111 to 114
if task_key + "_o.h5" not in os.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name = os.path.join(cache_directory, task_key + "_i.h5")
dump(file_name=file_name, data_dict=data_dict)

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🛠️ Refactor suggestion

Use exists() instead of scanning the directory for every task

Similar to the interactive path, scanning os.listdir(cache_directory) for each task does an unnecessary O(n) walk and risks TOCTOU issues.

- if task_key + "_o.h5" not in os.listdir(cache_directory):+ output_path = os.path.join(cache_directory, f"{task_key}_o.h5")+ if not os.path.exists(output_path):

You already compute the same path a few lines later; reuse it to keep the logic DRY.

📝 Committable suggestion

‼️IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
iftask_key+"_o.h5"notinos.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, task_key+"_i.h5")
dump(file_name=file_name, data_dict=data_dict)
# check for the output file directly rather than listing the whole directory
output_path=os.path.join(cache_directory, f"{task_key}_o.h5")
ifnotos.path.exists(output_path):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, f"{task_key}_i.h5")
dump(file_name=file_name, data_dict=data_dict)
🤖 Prompt for AI Agents
In executorlib/task_scheduler/file/shared.py around lines 111 to 114, replace
the check that scans os.listdir(cache_directory) with a direct file existence
check using os.path.exists() for the target file to avoid inefficient directory
scans and TOCTOU issues. Also, reuse the computed file path variable instead of
reconstructing it to keep the code DRY.

@codecov

codecovBot commented Jun 14, 2025

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Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 96.78%. Comparing base (c81d7a2) to head (ab123dc).
Report is 4 commits behind head on main.

Additional details and impacted files
@@ Coverage Diff @@## main #681 +/- ##
==========================================
- Coverage 96.78% 96.78% -0.01% 
==========================================
Files 29 29 Lines 1307 1306 -1 ==========================================
- Hits 1265 1264 -1 
Misses 42 42 

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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Remove or un-stick sticky/fixed headers that block content\n(function() {\n function unstick() {\n document.querySelectorAll('header, nav, [role=\"banner\"], .header, .navbar, .sticky, .fixed-top, [style*=\"position: fixed\"], [style*=\"position:sticky\"]').forEach(function(el) {\n if (el.style.position === 'fixed' || el.style.position === 'sticky' || \n getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {\n el.style.position = 'static';\n el.style.top = 'auto';\n el.style.zIndex = 'auto';\n }\n });\n }\n \n unstick();\n \n var observer = new MutationObserver(unstick);\n observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });\n})();", "Kill Sticky Headers"); } } catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
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[Feature] More efficient cache directory structure - #681

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jan-janssen merged 8 commits into
mainfrom
cache_red
Jun 14, 2025
Merged

[Feature] More efficient cache directory structure#681
jan-janssen merged 8 commits into
mainfrom
cache_red

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@jan-janssen

@jan-janssenjan-janssen commented Jun 14, 2025

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Summary by CodeRabbit

  • Refactor
    • Simplified cache file naming and directory structure from nested directories with fixed filenames to a flat directory using task-specific suffixes (e.g., _i.h5, _o.h5).
    • Updated logic for reading, writing, and checking cache files to match the new naming convention.
  • Tests
    • Adjusted test cases to use the new flat cache file structure and naming scheme.

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Walkthrough

This change refactors the cache file naming and directory structure across multiple modules. It replaces nested directories and fixed filenames with a flat directory structure, using task-key-based filenames with _i.h5 and _o.h5 suffixes for input and output cache files. All affected functions and tests are updated accordingly.

Changes

File(s)Change Summary
executorlib/standalone/cache.pyRefactored get_cache_data to use flat cache directory and process files ending with _o.h5 only.
executorlib/task_scheduler/file/backend.pyUpdated backend_write_file to use _r.h5 and _o.h5 suffixes, and changed base filename slicing logic.
executorlib/task_scheduler/file/shared.pyChanged cache file handling in execute_tasks_h5 and _check_task_output to use flat structure and new suffixes.
executorlib/task_scheduler/interactive/shared.pySimplified cache existence checks and file naming in _execute_task_with_cache to match new flat structure.
tests/test_cache_backend_execute.pyUpdated test cache file paths and directory creation to match the new flat structure and file naming convention.

Sequence Diagram(s)

sequenceDiagram
participant User
participant TaskScheduler
participant CacheDirectory
participant Backend
User->>TaskScheduler: Submit task(s) with cache enabled
TaskScheduler->>CacheDirectory: Check for {task_key}_o.h5
alt Cache hit
CacheDirectory-->>TaskScheduler: Return cached result
else Cache miss
TaskScheduler->>CacheDirectory: Write {task_key}_i.h5
TaskScheduler->>Backend: Execute task
Backend->>CacheDirectory: Write {task_key}_r.h5, then rename to {task_key}_o.h5
Backend-->>TaskScheduler: Return result
end
TaskScheduler-->>User: Return result
Loading

Possibly related PRs

Poem

In the cache where files once nested deep,
Now flat and tidy, they quietly sleep.
No more subfolders, just suffixes clear—
_i.h5 and _o.h5 bring order here!
The rabbit hops by, with a satisfied grin,
For simple paths make life easy to begin.
🐇✨


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Actionable comments posted: 2

🧹 Nitpick comments (3)
executorlib/standalone/cache.py (1)

31-33: Filter with str.endswith + isfile to avoid opening non-files

task_key[-5:] == "_o.h5" works but is brittle and will happily treat sub-directories named foo_o.h5 as files, causing h5py.File(...) to raise.

- file_name = os.path.join(cache_directory, task_key)- if task_key[-5:] == "_o.h5":+ if task_key.endswith("_o.h5"):+ file_name = os.path.join(cache_directory, task_key)+ if not os.path.isfile(file_name):+ continue # skip dirs / special files
tests/test_cache_backend_execute.py (1)

66-68: Remove stale nested-directory creation

The new flat cache layout no longer needs <cache>/<task_key>/.
Leaving this os.makedirs is harmless but clutters the tree and could hide pathing bugs later.

- file_name = os.path.join(cache_directory, task_key + "_i.h5")- os.makedirs(os.path.join(cache_directory, task_key), exist_ok=True)+ file_name = os.path.join(cache_directory, f"{task_key}_i.h5")
executorlib/task_scheduler/file/backend.py (1)

45-46: Derive file_name_out more robustly

os.path.splitext(file_name)[0][:-2] silently chops two characters, assuming the suffix is always _i.
If the naming ever changes (e.g. _in), this will mis-slice.

-from pathlib import Path-file_name_out = os.path.splitext(file_name)[0][:-2]+from pathlib import Path+file_name_out = Path(file_name).with_suffix("").as_posix().removesuffix("_i")

Path.removesuffix (Python ≥ 3.11) or manual if base.endswith("_i"): guards make the intention explicit.
This also improves readability.

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📒 Files selected for processing (5)
  • executorlib/standalone/cache.py (1 hunks)
  • executorlib/task_scheduler/file/backend.py (1 hunks)
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  • executorlib/task_scheduler/interactive/shared.py (1 hunks)
  • tests/test_cache_backend_execute.py (8 hunks)
🧰 Additional context used
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tests/test_cache_backend_execute.py (2)
executorlib/task_scheduler/file/hdf.py (1)
  • get_runtime (74-88)
executorlib/task_scheduler/file/shared.py (1)
  • FutureItem (14-49)
executorlib/task_scheduler/file/backend.py (1)
executorlib/task_scheduler/file/hdf.py (1)
  • dump (10-25)
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Comment on lines +154 to +156
os.makedirs(cache_directory, exist_ok=True)
file_name = os.path.join(cache_directory, task_key + "_o.h5")
if task_key + "_o.h5" not in os.listdir(cache_directory):

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🛠️ Refactor suggestion

Prefer os.path.exists() over directory scans for existence checks

Using task_key + "_o.h5" not in os.listdir(cache_directory) forces a full directory listing on every call.
os.path.exists(file_name) (or Path(file_name).exists()) is:

  1. O(1) rather than O(n) on large cache dirs.
  2. Immune to race conditions where a file is created between listdir() and the subsequent logic.
  3. Clearer to read.
- file_name = os.path.join(cache_directory, task_key + "_o.h5")- if task_key + "_o.h5" not in os.listdir(cache_directory):+ file_name = os.path.join(cache_directory, f"{task_key}_o.h5")+ if not os.path.exists(file_name):
📝 Committable suggestion

‼️IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, task_key+"_o.h5")
iftask_key+"_o.h5"notinos.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, f"{task_key}_o.h5")
ifnotos.path.exists(file_name):
🤖 Prompt for AI Agents
In executorlib/task_scheduler/interactive/shared.py around lines 154 to 156,
replace the check using 'task_key + "_o.h5" not in os.listdir(cache_directory)'
with 'not os.path.exists(file_name)'. This avoids scanning the entire directory,
improves performance, prevents race conditions, and makes the code clearer by
directly checking the file's existence.

Comment on lines +111 to 114
if task_key + "_o.h5" not in os.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name = os.path.join(cache_directory, task_key + "_i.h5")
dump(file_name=file_name, data_dict=data_dict)

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🛠️ Refactor suggestion

Use exists() instead of scanning the directory for every task

Similar to the interactive path, scanning os.listdir(cache_directory) for each task does an unnecessary O(n) walk and risks TOCTOU issues.

- if task_key + "_o.h5" not in os.listdir(cache_directory):+ output_path = os.path.join(cache_directory, f"{task_key}_o.h5")+ if not os.path.exists(output_path):

You already compute the same path a few lines later; reuse it to keep the logic DRY.

📝 Committable suggestion

‼️IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
iftask_key+"_o.h5"notinos.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, task_key+"_i.h5")
dump(file_name=file_name, data_dict=data_dict)
# check for the output file directly rather than listing the whole directory
output_path=os.path.join(cache_directory, f"{task_key}_o.h5")
ifnotos.path.exists(output_path):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, f"{task_key}_i.h5")
dump(file_name=file_name, data_dict=data_dict)
🤖 Prompt for AI Agents
In executorlib/task_scheduler/file/shared.py around lines 111 to 114, replace
the check that scans os.listdir(cache_directory) with a direct file existence
check using os.path.exists() for the target file to avoid inefficient directory
scans and TOCTOU issues. Also, reuse the computed file path variable instead of
reconstructing it to keep the code DRY.

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Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 96.78%. Comparing base (c81d7a2) to head (ab123dc).
Report is 4 commits behind head on main.

Additional details and impacted files
@@ Coverage Diff @@## main #681 +/- ##
==========================================
- Coverage 96.78% 96.78% -0.01% 
==========================================
Files 29 29 Lines 1307 1306 -1 ==========================================
- Hits 1265 1264 -1 
Misses 42 42 

☔ View full report in Codecov by Sentry.
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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Universal Dark Mode - works on any site\n(function() {\n var enabled = true;\n \n function applyDarkMode() {\n if (!enabled) return;\n \n // Create style element if it doesn't exist\n var style = document.getElementById('universal-dark-mode-style');\n if (!style) {\n style = document.createElement('style');\n style.id = 'universal-dark-mode-style';\n document.head.appendChild(style);\n }\n \n // Dark mode CSS - inverts colors but preserves images/video\n style.textContent = '\n /* Invert everything except media */\n html {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #1a1a2e !important;\n }\n \n /* Restore images, videos, iframes, canvas */\n img, video, iframe, canvas, svg, picture, [style*=\"background-image\"] {\n filter: invert(1) hue-rotate(180deg) !important;\n }\n \n /* Preserve specific elements that should not be inverted */\n .no-dark-mode, .no-dark-mode *,\n [data-theme=\"light\"], [data-theme=\"light\"],\n .ace_editor, .ace_editor *,\n .CodeMirror, .CodeMirror *,\n .monaco-editor, .monaco-editor *,\n .markdown-body pre, .markdown-body pre *,\n .highlight, .highlight *,\n pre code, pre code * {\n filter: none !important;\n }\n \n /* Fix common UI elements */\n .modal, .popup, .dropdown-menu, .tooltip, .popover {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #2d2d44 !important;\n border-color: #444 !important;\n }\n \n /* Scrollbars */\n ::-webkit-scrollbar { background: #1a1a2e !important; }\n ::-webkit-scrollbar-thumb { background: #444 !important; }\n ::-webkit-scrollbar-thumb:hover { background: #555 !important; }\n \n /* Selection */\n ::selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ';\n }\n \n function removeDarkMode() {\n var style = document.getElementById('universal-dark-mode-style');\n if (style) style.remove();\n }\n \n // Toggle with Alt+Shift+D\n document.addEventListener('keydown', function(e) {\n if (e.altKey && e.shiftKey && e.key === 'D') {\n e.preventDefault();\n enabled = !enabled;\n if (enabled) {\n applyDarkMode();\n console.log('[Universal Dark Mode] Enabled');\n } else {\n removeDarkMode();\n console.log('[Universal Dark Mode] Disabled');\n }\n }\n });\n \n // Apply on load\n applyDarkMode();\n \n // Re-apply on dynamic content\n var observer = new MutationObserver(function(mutations) {\n if (enabled && !document.getElementById('universal-dark-mode-style')) {\n applyDarkMode();\n }\n });\n observer.observe(document.head, { childList: true });\n \n console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');\n})();", "Universal Dark Mode"); } } catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); } })(); })();
Skip to content

[Feature] More efficient cache directory structure - #681

Merged
jan-janssen merged 8 commits into
mainfrom
cache_red
Jun 14, 2025
Merged

[Feature] More efficient cache directory structure#681
jan-janssen merged 8 commits into
mainfrom
cache_red

Conversation

@jan-janssen

@jan-janssenjan-janssen commented Jun 14, 2025

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Summary by CodeRabbit

  • Refactor
    • Simplified cache file naming and directory structure from nested directories with fixed filenames to a flat directory using task-specific suffixes (e.g., _i.h5, _o.h5).
    • Updated logic for reading, writing, and checking cache files to match the new naming convention.
  • Tests
    • Adjusted test cases to use the new flat cache file structure and naming scheme.

@coderabbitai

coderabbitaiBot commented Jun 14, 2025

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Walkthrough

This change refactors the cache file naming and directory structure across multiple modules. It replaces nested directories and fixed filenames with a flat directory structure, using task-key-based filenames with _i.h5 and _o.h5 suffixes for input and output cache files. All affected functions and tests are updated accordingly.

Changes

File(s)Change Summary
executorlib/standalone/cache.pyRefactored get_cache_data to use flat cache directory and process files ending with _o.h5 only.
executorlib/task_scheduler/file/backend.pyUpdated backend_write_file to use _r.h5 and _o.h5 suffixes, and changed base filename slicing logic.
executorlib/task_scheduler/file/shared.pyChanged cache file handling in execute_tasks_h5 and _check_task_output to use flat structure and new suffixes.
executorlib/task_scheduler/interactive/shared.pySimplified cache existence checks and file naming in _execute_task_with_cache to match new flat structure.
tests/test_cache_backend_execute.pyUpdated test cache file paths and directory creation to match the new flat structure and file naming convention.

Sequence Diagram(s)

sequenceDiagram
participant User
participant TaskScheduler
participant CacheDirectory
participant Backend
User->>TaskScheduler: Submit task(s) with cache enabled
TaskScheduler->>CacheDirectory: Check for {task_key}_o.h5
alt Cache hit
CacheDirectory-->>TaskScheduler: Return cached result
else Cache miss
TaskScheduler->>CacheDirectory: Write {task_key}_i.h5
TaskScheduler->>Backend: Execute task
Backend->>CacheDirectory: Write {task_key}_r.h5, then rename to {task_key}_o.h5
Backend-->>TaskScheduler: Return result
end
TaskScheduler-->>User: Return result
Loading

Possibly related PRs

Poem

In the cache where files once nested deep,
Now flat and tidy, they quietly sleep.
No more subfolders, just suffixes clear—
_i.h5 and _o.h5 bring order here!
The rabbit hops by, with a satisfied grin,
For simple paths make life easy to begin.
🐇✨


📜 Recent review details

Configuration used: CodeRabbit UI
Review profile: CHILL
Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between 8281007 and ab123dc.

📒 Files selected for processing (1)
  • executorlib/task_scheduler/file/shared.py (3 hunks)
🚧 Files skipped from review as they are similar to previous changes (1)
  • executorlib/task_scheduler/file/shared.py
⏰ Context from checks skipped due to timeout of 90000ms (11)
  • GitHub Check: unittest_openmpi (ubuntu-latest, 3.13)
  • GitHub Check: benchmark (ubuntu-latest, 3.13, .ci_support/environment-openmpi.yml)
  • GitHub Check: unittest_flux_openmpi
  • GitHub Check: unittest_flux_mpich
  • GitHub Check: unittest_mpich (macos-latest, 3.13)
  • GitHub Check: benchmark (ubuntu-latest, 3.13, .ci_support/environment-mpich.yml)
  • GitHub Check: unittest_openmpi (macos-latest, 3.13)
  • GitHub Check: unittest_openmpi (ubuntu-latest, 3.12)
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Actionable comments posted: 2

🧹 Nitpick comments (3)
executorlib/standalone/cache.py (1)

31-33: Filter with str.endswith + isfile to avoid opening non-files

task_key[-5:] == "_o.h5" works but is brittle and will happily treat sub-directories named foo_o.h5 as files, causing h5py.File(...) to raise.

- file_name = os.path.join(cache_directory, task_key)- if task_key[-5:] == "_o.h5":+ if task_key.endswith("_o.h5"):+ file_name = os.path.join(cache_directory, task_key)+ if not os.path.isfile(file_name):+ continue # skip dirs / special files
tests/test_cache_backend_execute.py (1)

66-68: Remove stale nested-directory creation

The new flat cache layout no longer needs <cache>/<task_key>/.
Leaving this os.makedirs is harmless but clutters the tree and could hide pathing bugs later.

- file_name = os.path.join(cache_directory, task_key + "_i.h5")- os.makedirs(os.path.join(cache_directory, task_key), exist_ok=True)+ file_name = os.path.join(cache_directory, f"{task_key}_i.h5")
executorlib/task_scheduler/file/backend.py (1)

45-46: Derive file_name_out more robustly

os.path.splitext(file_name)[0][:-2] silently chops two characters, assuming the suffix is always _i.
If the naming ever changes (e.g. _in), this will mis-slice.

-from pathlib import Path-file_name_out = os.path.splitext(file_name)[0][:-2]+from pathlib import Path+file_name_out = Path(file_name).with_suffix("").as_posix().removesuffix("_i")

Path.removesuffix (Python ≥ 3.11) or manual if base.endswith("_i"): guards make the intention explicit.
This also improves readability.

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📒 Files selected for processing (5)
  • executorlib/standalone/cache.py (1 hunks)
  • executorlib/task_scheduler/file/backend.py (1 hunks)
  • executorlib/task_scheduler/file/shared.py (3 hunks)
  • executorlib/task_scheduler/interactive/shared.py (1 hunks)
  • tests/test_cache_backend_execute.py (8 hunks)
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tests/test_cache_backend_execute.py (2)
executorlib/task_scheduler/file/hdf.py (1)
  • get_runtime (74-88)
executorlib/task_scheduler/file/shared.py (1)
  • FutureItem (14-49)
executorlib/task_scheduler/file/backend.py (1)
executorlib/task_scheduler/file/hdf.py (1)
  • dump (10-25)
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  • GitHub Check: unittest_mpich (ubuntu-latest, 3.12)
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Comment on lines +154 to +156
os.makedirs(cache_directory, exist_ok=True)
file_name = os.path.join(cache_directory, task_key + "_o.h5")
if task_key + "_o.h5" not in os.listdir(cache_directory):

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🛠️ Refactor suggestion

Prefer os.path.exists() over directory scans for existence checks

Using task_key + "_o.h5" not in os.listdir(cache_directory) forces a full directory listing on every call.
os.path.exists(file_name) (or Path(file_name).exists()) is:

  1. O(1) rather than O(n) on large cache dirs.
  2. Immune to race conditions where a file is created between listdir() and the subsequent logic.
  3. Clearer to read.
- file_name = os.path.join(cache_directory, task_key + "_o.h5")- if task_key + "_o.h5" not in os.listdir(cache_directory):+ file_name = os.path.join(cache_directory, f"{task_key}_o.h5")+ if not os.path.exists(file_name):
📝 Committable suggestion

‼️IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, task_key+"_o.h5")
iftask_key+"_o.h5"notinos.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, f"{task_key}_o.h5")
ifnotos.path.exists(file_name):
🤖 Prompt for AI Agents
In executorlib/task_scheduler/interactive/shared.py around lines 154 to 156,
replace the check using 'task_key + "_o.h5" not in os.listdir(cache_directory)'
with 'not os.path.exists(file_name)'. This avoids scanning the entire directory,
improves performance, prevents race conditions, and makes the code clearer by
directly checking the file's existence.

Comment on lines +111 to 114
if task_key + "_o.h5" not in os.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name = os.path.join(cache_directory, task_key + "_i.h5")
dump(file_name=file_name, data_dict=data_dict)

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🛠️ Refactor suggestion

Use exists() instead of scanning the directory for every task

Similar to the interactive path, scanning os.listdir(cache_directory) for each task does an unnecessary O(n) walk and risks TOCTOU issues.

- if task_key + "_o.h5" not in os.listdir(cache_directory):+ output_path = os.path.join(cache_directory, f"{task_key}_o.h5")+ if not os.path.exists(output_path):

You already compute the same path a few lines later; reuse it to keep the logic DRY.

📝 Committable suggestion

‼️IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
iftask_key+"_o.h5"notinos.listdir(cache_directory):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, task_key+"_i.h5")
dump(file_name=file_name, data_dict=data_dict)
# check for the output file directly rather than listing the whole directory
output_path=os.path.join(cache_directory, f"{task_key}_o.h5")
ifnotos.path.exists(output_path):
os.makedirs(cache_directory, exist_ok=True)
file_name=os.path.join(cache_directory, f"{task_key}_i.h5")
dump(file_name=file_name, data_dict=data_dict)
🤖 Prompt for AI Agents
In executorlib/task_scheduler/file/shared.py around lines 111 to 114, replace
the check that scans os.listdir(cache_directory) with a direct file existence
check using os.path.exists() for the target file to avoid inefficient directory
scans and TOCTOU issues. Also, reuse the computed file path variable instead of
reconstructing it to keep the code DRY.

@codecov

codecovBot commented Jun 14, 2025

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Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 96.78%. Comparing base (c81d7a2) to head (ab123dc).
Report is 4 commits behind head on main.

Additional details and impacted files
@@ Coverage Diff @@## main #681 +/- ##
==========================================
- Coverage 96.78% 96.78% -0.01% 
==========================================
Files 29 29 Lines 1307 1306 -1 ==========================================
- Hits 1265 1264 -1 
Misses 42 42 

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