mutect

Here are 4 public repositories matching this topic...

gatk-workflows / gatk4-somatic-snvs-indels

This repo has been archived, these workflows are still available in the GATK repository under the scripts directory. The workflows are also organized in Dockstore in the GATK Best Practices Workflows collection.

tumor gatk variants mutect

Updated Mar 9, 2020
WDL

IARCbioinfo / mutect-nf

Star

Mutect pipeline with Nextflow

nextflow mutect

Updated Sep 22, 2025
Nextflow

RRafiee / GenomeAnalysisToolkit

Star

Genome Analysis Toolkit

genome gatk shell-script fastq bwa genome-analysis mutect bamtools bam2fastq

Updated Dec 13, 2018
R

rhshah / basicfiltering

Star

Basic filtering scripts for various mutation calling tools

ngs mutect pindel vardict

Updated Sep 15, 2017
Python

Add this topic to your repo

To associate your repository with the mutect topic, visit your repo's landing page and select "manage topics."

Learn more