Zavolan Lab

PAQR3 is the updated version of the PAQR tool for quantifying poly(A) sites from bulk RNA-Seq data.

This repository contains the computational workflows and downstream analysis notebooks related to CRISPR projects in Zavolan lab.

This repository contains python modules dedicated to various utilities for genomic data analysis, like library size normalization, annotation conversion etc

This repository contains a set of workflows and tools for processing and analysis of ONT RNA long-read sequencing data

This repository is dedicated to lab's projects related to the studying of subcellular localization of alternative polyadenylation (APA) isoforms.

Snakemake workflow for the mapping and quantification of miRNAs and isomiRs from miRNA-Seq libraries.

This repository contains the computational workflows and downstream analysis notebooks related to the polyA tail length changes linked to PAIP1 perturbations, conducted by the lab of Prof. Maria Hondele.

Single Cell Identification of Novel PolyA Sites.