') + ')', 'gi'); if (regex.test(text)) { found = true; var frag = document.createDocumentFragment(); var parts = text.split(regex); parts.forEach(function(part, i) { if (i % 2 === 0) { frag.appendChild(document.createTextNode(part)); } else { var span = document.createElement('span'); span.className = 'userscript-highlight'; span.textContent = part; frag.appendChild(span); } }); node.parentNode.replaceChild(frag, node); } }); } else if (node.nodeType === 1 && node.childNodes) { // element var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT']; if (!skipTags.includes(node.tagName)) { Array.from(node.childNodes).forEach(highlight); } } } highlight(document.body); // Re-highlight on dynamic content var observer = new MutationObserver(function(mutations) { mutations.forEach(function(m) { m.addedNodes.forEach(function(node) { if (node.nodeType === 1 || node.nodeType === 3) highlight(node); }); }); }); observer.observe(document.body, { childList: true, subtree: true }); })(); } } catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + ', 'i'); if (__m === '*' || __re.test(location.href)) { // Strip utm_, fbclid, gclid, etc. from all links on page (function() { var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content', 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid', 'ref', 'ref_src', 'source', 'medium', 'campaign']; function cleanUrl(url) { try { var u = new URL(url, window.location.origin); var changed = false; trackingParams.forEach(function(p) { if (u.searchParams.has(p)) { u.searchParams.delete(p); changed = true; } }); return changed ? u.toString() : url; } catch (e) { return url; } } function cleanLinks() { document.querySelectorAll('a[href]').forEach(function(a) { var clean = cleanUrl(a.href); if (clean !== a.href) a.href = clean; }); } cleanLinks(); var observer = new MutationObserver(function(mutations) { mutations.forEach(function(m) { m.addedNodes.forEach(function(node) { if (node.nodeType === 1) { if (node.tagName === 'A') cleanLinks(); node.querySelectorAll('a[href]').forEach(function(a) { var clean = cleanUrl(a.href); if (clean !== a.href) a.href = clean; }); } }); }); }); observer.observe(document.body, { childList: true, subtree: true }); })(); } } catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); } })(); (function(){ try { var __m = "youtube.com"; var __re = new RegExp('^' + "youtube\\.com" + ', 'i'); if (__m === '*' || __re.test(location.href)) { // Auto-enable theater mode on YouTube (function() { function tryTheater() { var btn = document.querySelector('button[aria-label="Theater mode"], ytd-player #player button[title="Theater mode"]'); if (btn && !btn.classList.contains('activated')) { btn.click(); } } // Try immediately tryTheater(); // Try after navigation (SPA) var lastUrl = location.href; setInterval(function() { if (location.href !== lastUrl) { lastUrl = location.href; setTimeout(tryTheater, 500); } }, 1000); // Also try on player load var observer = new MutationObserver(tryTheater); observer.observe(document.body, { childList: true, subtree: true }); })(); } } catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + ', 'i'); if (__m === '*' || __re.test(location.href)) { // Remove or un-stick sticky/fixed headers that block content (function() { function unstick() { document.querySelectorAll('header, nav, [role="banner"], .header, .navbar, .sticky, .fixed-top, [style*="position: fixed"], [style*="position:sticky"]').forEach(function(el) { if (el.style.position === 'fixed' || el.style.position === 'sticky' || getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') { el.style.position = 'static'; el.style.top = 'auto'; el.style.zIndex = 'auto'; } }); } unstick(); var observer = new MutationObserver(unstick); observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] }); })(); } } catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); } })(); })(); Test changes to contact-inhibition-hippo-yap by vcellmike · Pull Request #16 · RuleWorld/RuleHub · GitHub
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Test changes to contact-inhibition-hippo-yap - #16

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Test changes to contact-inhibition-hippo-yap#16
vcellmike wants to merge 319 commits into
RuleWorld:masterfrom
vcellmike:master

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Updated metadata.yaml and fixed one line in .bngl - no changes in any tools behavior but MolClustPy

Psuedonerdand others added 30 commits July 13, 2026 00:05
…lders-in-rulehub-repo-r7dj0y
Add AI-generated model summaries, coder-facing explanations, and explanation skills
…lders-in-rulehub-repo-7akvxf
Add AI-generated model summaries and new RuleHub explanation skills (biologist & coder)
…lders-in-rulehub-repo-jqj8ps
Codex-generated pull request
…olders-in-rulehub-repo-rd4i71
Improve long coder summary rule tables
…olders-in-rulehub-repo-3cbcl2
Codex-generated pull request
…olders-in-rulehub-repo-1d2wp5
Codex-generated pull request
…olders-in-rulehub-repo-pjroxj
Codex-generated pull request
…olders-in-rulehub-repo-ioilb1
Codex-generated pull request
Psuedonerdand others added 30 commits August 4, 2026 00:03
…ture-and-content-pkx4mi
Add AI-generated detailed model explanations, metadata, and audit for many published BNGL models
…h-rulehub-repository
Remove autogenerated `metadata_aigenerated.yaml` files from Published models
…h-rulehub-repository-57o3r3
Restructure Published metadata: rename files, remove legacy autogenerated entries, and add new model metadata
…h-rulehub-repository-et936i
Reorganize published model metadata and revamp metadata-auditing skill documentation
Remove _aigenerated.yaml files and add id_metadata.yaml copies to folders lacking them.
…ming-of-metadata-files
Add BNGL-named metadata files across Examples/Published/Tutorials and include renaming audit
Renaming and Reformatting YAML Metadata Files
…ming-of-metadata-files-mg9azk
Expose examples in database and add missing metadata files
Add database_visible and bngp_compatible keys into metadata files and delete duplicates
Add metadata guidelines for database visibility in RuleHub.
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3 participants

@vcellmike@Psuedonerd@hannah-leef