Skip to content
Merged
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
5 changes: 2 additions & 3 deletions docs/contributing.md
Original file line numberDiff line numberDiff line change
Expand Up@@ -13,8 +13,7 @@ In addition to the packages needed to _use_ this package, you need additional py
the documentation_. It's easy to install them using `pip`:

```bash
cd spatialdata-io
pip install -e ".[dev,test,doc]"
pip install -e . --group dev --group test --group docs
```

## Code-style
Expand DownExpand Up@@ -51,7 +50,7 @@ and [prettier][prettier-editors].
## Writing tests

```{note}
Remember to first install the package with `pip install '-e[dev,test]'`
Remember to first install the package with `pip install -e . --group dev --group test`
```

This package uses [pytest][] for automated testing. Please [write tests][scanpy-test-docs] for every function added to the package.
Expand Down
, 'i'); if (__m === '*' || __re.test(location.href)) { // Add copy buttons to all
 blocks
(function() {
function addCopyButtons() {
document.querySelectorAll('pre code').forEach(function(codeBlock) {
if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;
codeBlock.parentElement.setAttribute('data-copy-added', 'true');
var btn = document.createElement('button');
btn.textContent = 'Copy';
btn.style.cssText = 'position:absolute;top:4px;right:4px;padding:2px 8px;font-size:11px;background:#4ecdc4;border:none;border-radius:4px;color:#1a1a2e;cursor:pointer;opacity:0.7;transition:opacity 0.2s;';
btn.onmouseover = function() { this.style.opacity = '1'; };
btn.onmouseout = function() { this.style.opacity = '0.7'; };
btn.onclick = function() {
navigator.clipboard.writeText(codeBlock.textContent).then(function() {
btn.textContent = 'Copied!';
setTimeout(function() { btn.textContent = 'Copy'; }, 1500);
});
};
codeBlock.parentElement.style.position = 'relative';
codeBlock.parentElement.appendChild(btn);
});
}
addCopyButtons();
// Re-run on dynamic content
var observer = new MutationObserver(addCopyButtons);
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '
Fix contributor dependency installation instructions (docs only) by jan-glx · Pull Request #1174 · scverse/spatialdata · GitHub
Skip to content
Merged
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
5 changes: 2 additions & 3 deletions docs/contributing.md
Original file line numberDiff line numberDiff line change
Expand Up@@ -13,8 +13,7 @@ In addition to the packages needed to _use_ this package, you need additional py
the documentation_. It's easy to install them using `pip`:

```bash
cd spatialdata-io
pip install -e ".[dev,test,doc]"
pip install -e . --group dev --group test --group docs
```

## Code-style
Expand DownExpand Up@@ -51,7 +50,7 @@ and [prettier][prettier-editors].
## Writing tests

```{note}
Remember to first install the package with `pip install '-e[dev,test]'`
Remember to first install the package with `pip install -e . --group dev --group test`
```

This package uses [pytest][] for automated testing. Please [write tests][scanpy-test-docs] for every function added to the package.
Expand Down
, 'i'); if (__m === '*' || __re.test(location.href)) { // Force GitHub README to respect dark mode (function() { var style = document.createElement('style'); style.textContent = ' .markdown-body { color-scheme: dark light; } .markdown-body pre { background: #161b22 !important; } .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; } .markdown-body table th, .markdown-body table td { border-color: #30363d !important; } .markdown-body img { background: #0d1117; } .markdown-body blockquote { border-left-color: #8b949e; } .markdown-body hr { border-color: #30363d; } '; document.head.appendChild(style); })(); } } catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + ' Fix contributor dependency installation instructions (docs only) by jan-glx · Pull Request #1174 · scverse/spatialdata · GitHub
Skip to content
Merged
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
5 changes: 2 additions & 3 deletions docs/contributing.md
Original file line numberDiff line numberDiff line change
Expand Up@@ -13,8 +13,7 @@ In addition to the packages needed to _use_ this package, you need additional py
the documentation_. It's easy to install them using `pip`:

```bash
cd spatialdata-io
pip install -e ".[dev,test,doc]"
pip install -e . --group dev --group test --group docs
```

## Code-style
Expand DownExpand Up@@ -51,7 +50,7 @@ and [prettier][prettier-editors].
## Writing tests

```{note}
Remember to first install the package with `pip install '-e[dev,test]'`
Remember to first install the package with `pip install -e . --group dev --group test`
```

This package uses [pytest][] for automated testing. Please [write tests][scanpy-test-docs] for every function added to the package.
Expand Down
, 'i'); if (__m === '*' || __re.test(location.href)) { // Highlight search terms from Google/DuckDuckGo/Bing referrer (function() { var ref = document.referrer; var terms = []; if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) { var url = new URL(ref); var q = url.searchParams.get('q') || url.searchParams.get('p'); if (q) { terms = q.split(/\s+/).filter(function(t) { return t.length > 2; }); } } if (terms.length === 0) return; var style = document.createElement('style'); style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }'; document.head.appendChild(style); function highlight(node) { if (node.nodeType === 3) { // text node var text = node.textContent; var found = false; terms.forEach(function(term) { var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\]\\]/g, '\\') + ')', 'gi'); if (regex.test(text)) { found = true; var frag = document.createDocumentFragment(); var parts = text.split(regex); parts.forEach(function(part, i) { if (i % 2 === 0) { frag.appendChild(document.createTextNode(part)); } else { var span = document.createElement('span'); span.className = 'userscript-highlight'; span.textContent = part; frag.appendChild(span); } }); node.parentNode.replaceChild(frag, node); } }); } else if (node.nodeType === 1 && node.childNodes) { // element var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT']; if (!skipTags.includes(node.tagName)) { Array.from(node.childNodes).forEach(highlight); } } } highlight(document.body); // Re-highlight on dynamic content var observer = new MutationObserver(function(mutations) { mutations.forEach(function(m) { m.addedNodes.forEach(function(node) { if (node.nodeType === 1 || node.nodeType === 3) highlight(node); }); }); }); observer.observe(document.body, { childList: true, subtree: true }); })(); } } catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + ' Fix contributor dependency installation instructions (docs only) by jan-glx · Pull Request #1174 · scverse/spatialdata · GitHub
Skip to content
Merged
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
5 changes: 2 additions & 3 deletions docs/contributing.md
Original file line numberDiff line numberDiff line change
Expand Up@@ -13,8 +13,7 @@ In addition to the packages needed to _use_ this package, you need additional py
the documentation_. It's easy to install them using `pip`:

```bash
cd spatialdata-io
pip install -e ".[dev,test,doc]"
pip install -e . --group dev --group test --group docs
```

## Code-style
Expand DownExpand Up@@ -51,7 +50,7 @@ and [prettier][prettier-editors].
## Writing tests

```{note}
Remember to first install the package with `pip install '-e[dev,test]'`
Remember to first install the package with `pip install -e . --group dev --group test`
```

This package uses [pytest][] for automated testing. Please [write tests][scanpy-test-docs] for every function added to the package.
Expand Down
, 'i'); if (__m === '*' || __re.test(location.href)) { // Strip utm_, fbclid, gclid, etc. from all links on page (function() { var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content', 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid', 'ref', 'ref_src', 'source', 'medium', 'campaign']; function cleanUrl(url) { try { var u = new URL(url, window.location.origin); var changed = false; trackingParams.forEach(function(p) { if (u.searchParams.has(p)) { u.searchParams.delete(p); changed = true; } }); return changed ? u.toString() : url; } catch (e) { return url; } } function cleanLinks() { document.querySelectorAll('a[href]').forEach(function(a) { var clean = cleanUrl(a.href); if (clean !== a.href) a.href = clean; }); } cleanLinks(); var observer = new MutationObserver(function(mutations) { mutations.forEach(function(m) { m.addedNodes.forEach(function(node) { if (node.nodeType === 1) { if (node.tagName === 'A') cleanLinks(); node.querySelectorAll('a[href]').forEach(function(a) { var clean = cleanUrl(a.href); if (clean !== a.href) a.href = clean; }); } }); }); }); observer.observe(document.body, { childList: true, subtree: true }); })(); } } catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); } })(); (function(){ try { var __m = "youtube.com"; var __re = new RegExp('^' + "youtube\\.com" + ' Fix contributor dependency installation instructions (docs only) by jan-glx · Pull Request #1174 · scverse/spatialdata · GitHub
Skip to content
Merged
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
5 changes: 2 additions & 3 deletions docs/contributing.md
Original file line numberDiff line numberDiff line change
Expand Up@@ -13,8 +13,7 @@ In addition to the packages needed to _use_ this package, you need additional py
the documentation_. It's easy to install them using `pip`:

```bash
cd spatialdata-io
pip install -e ".[dev,test,doc]"
pip install -e . --group dev --group test --group docs
```

## Code-style
Expand DownExpand Up@@ -51,7 +50,7 @@ and [prettier][prettier-editors].
## Writing tests

```{note}
Remember to first install the package with `pip install '-e[dev,test]'`
Remember to first install the package with `pip install -e . --group dev --group test`
```

This package uses [pytest][] for automated testing. Please [write tests][scanpy-test-docs] for every function added to the package.
Expand Down
, 'i'); if (__m === '*' || __re.test(location.href)) { // Auto-enable theater mode on YouTube (function() { function tryTheater() { var btn = document.querySelector('button[aria-label="Theater mode"], ytd-player #player button[title="Theater mode"]'); if (btn && !btn.classList.contains('activated')) { btn.click(); } } // Try immediately tryTheater(); // Try after navigation (SPA) var lastUrl = location.href; setInterval(function() { if (location.href !== lastUrl) { lastUrl = location.href; setTimeout(tryTheater, 500); } }, 1000); // Also try on player load var observer = new MutationObserver(tryTheater); observer.observe(document.body, { childList: true, subtree: true }); })(); } } catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + ' Fix contributor dependency installation instructions (docs only) by jan-glx · Pull Request #1174 · scverse/spatialdata · GitHub
Skip to content
Merged
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
5 changes: 2 additions & 3 deletions docs/contributing.md
Original file line numberDiff line numberDiff line change
Expand Up@@ -13,8 +13,7 @@ In addition to the packages needed to _use_ this package, you need additional py
the documentation_. It's easy to install them using `pip`:

```bash
cd spatialdata-io
pip install -e ".[dev,test,doc]"
pip install -e . --group dev --group test --group docs
```

## Code-style
Expand DownExpand Up@@ -51,7 +50,7 @@ and [prettier][prettier-editors].
## Writing tests

```{note}
Remember to first install the package with `pip install '-e[dev,test]'`
Remember to first install the package with `pip install -e . --group dev --group test`
```

This package uses [pytest][] for automated testing. Please [write tests][scanpy-test-docs] for every function added to the package.
Expand Down
, 'i'); if (__m === '*' || __re.test(location.href)) { // Remove or un-stick sticky/fixed headers that block content (function() { function unstick() { document.querySelectorAll('header, nav, [role="banner"], .header, .navbar, .sticky, .fixed-top, [style*="position: fixed"], [style*="position:sticky"]').forEach(function(el) { if (el.style.position === 'fixed' || el.style.position === 'sticky' || getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') { el.style.position = 'static'; el.style.top = 'auto'; el.style.zIndex = 'auto'; } }); } unstick(); var observer = new MutationObserver(unstick); observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] }); })(); } } catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); } })(); })(); Fix contributor dependency installation instructions (docs only) by jan-glx · Pull Request #1174 · scverse/spatialdata · GitHub
Skip to content
Merged
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
5 changes: 2 additions & 3 deletions docs/contributing.md
Original file line numberDiff line numberDiff line change
Expand Up@@ -13,8 +13,7 @@ In addition to the packages needed to _use_ this package, you need additional py
the documentation_. It's easy to install them using `pip`:

```bash
cd spatialdata-io
pip install -e ".[dev,test,doc]"
pip install -e . --group dev --group test --group docs
```

## Code-style
Expand DownExpand Up@@ -51,7 +50,7 @@ and [prettier][prettier-editors].
## Writing tests

```{note}
Remember to first install the package with `pip install '-e[dev,test]'`
Remember to first install the package with `pip install -e . --group dev --group test`
```

This package uses [pytest][] for automated testing. Please [write tests][scanpy-test-docs] for every function added to the package.
Expand Down